RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 HOXC9P31274 260 aa15.44■□□□□ 0.06
NR1H3-230ENST00000527949 ACSBG1Q96GR2 724 aa15.44■□□□□ 0.06
NR1H3-230ENST00000527949 CARD14Q9BXL6 1004 aa15.43■□□□□ 0.06
NR1H3-230ENST00000527949 UTRNP46939 3433 aa15.42■□□□□ 0.06
NR1H3-230ENST00000527949 PAPPAQ13219 1627 aa15.42■□□□□ 0.06
NR1H3-230ENST00000527949 NSD3Q9BZ95 1437 aa15.42■□□□□ 0.06
NR1H3-230ENST00000527949 GRIN3BO60391 1043 aa15.41■□□□□ 0.06
NR1H3-230ENST00000527949 AMPHP49418 695 aa15.41■□□□□ 0.06
NR1H3-230ENST00000527949 AKT1S1Q96B36 256 aa15.41■□□□□ 0.06
NR1H3-230ENST00000527949 GGNBP2Q9H3C7 697 aa15.41■□□□□ 0.06
NR1H3-230ENST00000527949 INSRP06213 1382 aa15.4■□□□□ 0.06
NR1H3-230ENST00000527949 ZNF827Q17R98 1081 aa15.4■□□□□ 0.06
NR1H3-230ENST00000527949 TFCP2L1Q9NZI6 479 aa15.4■□□□□ 0.06
NR1H3-230ENST00000527949 CGNL1Q0VF96 1302 aa15.4■□□□□ 0.06
NR1H3-230ENST00000527949 FLT4P35916 1363 aa15.39■□□□□ 0.05
NR1H3-230ENST00000527949 HSPA5P11021 654 aaKnown RBP15.39■□□□□ 0.05
NR1H3-230ENST00000527949 LRRC4BQ9NT99 713 aa15.39■□□□□ 0.05
NR1H3-230ENST00000527949 ANKRD26Q9UPS8 1709 aa15.39■□□□□ 0.05
NR1H3-230ENST00000527949 SMG6Q86US8 1419 aaKnown RBP15.38■□□□□ 0.05
NR1H3-230ENST00000527949 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
NR1H3-230ENST00000527949 CHD4Q14839 1912 aa15.38■□□□□ 0.05
NR1H3-230ENST00000527949 IFFO2Q5TF58 517 aa15.37■□□□□ 0.05
NR1H3-230ENST00000527949 RRS1Q15050 365 aaKnown RBP15.36■□□□□ 0.05
NR1H3-230ENST00000527949 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
NR1H3-230ENST00000527949 DDX54Q8TDD1 881 aaKnown RBP15.36■□□□□ 0.05
NR1H3-230ENST00000527949 PNPLA7Q6ZV29 1317 aa15.36■□□□□ 0.05
NR1H3-230ENST00000527949 NSD2O96028 1365 aa15.36■□□□□ 0.05
NR1H3-230ENST00000527949 NCAPD2Q15021 1401 aa15.35■□□□□ 0.05
NR1H3-230ENST00000527949 FBLN1P23142 703 aa15.35■□□□□ 0.05
NR1H3-230ENST00000527949 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
NR1H3-230ENST00000527949 SYTL4Q96C24 671 aaPredicted RBP15.34■□□□□ 0.05
NR1H3-230ENST00000527949 LTV1Q96GA3 475 aaPredicted RBP15.34■□□□□ 0.05
NR1H3-230ENST00000527949 PLEKHG2Q9H7P9 1386 aa15.34■□□□□ 0.05
NR1H3-230ENST00000527949 BTAF1O14981 1849 aa15.33■□□□□ 0.05
NR1H3-230ENST00000527949 NBPF6Q5VWK0 638 aa15.33■□□□□ 0.04
NR1H3-230ENST00000527949 NBPF4Q96M43 638 aa15.33■□□□□ 0.04
NR1H3-230ENST00000527949 QSER1Q2KHR3 1735 aa15.33■□□□□ 0.04
NR1H3-230ENST00000527949 WASHC2AQ641Q2 1341 aa15.33■□□□□ 0.04
NR1H3-230ENST00000527949 SHANK3Q9BYB0 1731 aa15.32■□□□□ 0.04
NR1H3-230ENST00000527949 MAP2P11137 1827 aaKnown RBP15.32■□□□□ 0.04
NR1H3-230ENST00000527949 HSP90AB2PQ58FF8 381 aa15.32■□□□□ 0.04
NR1H3-230ENST00000527949 ZCRB1Q8TBF4 217 aaKnown RBP15.32■□□□□ 0.04
NR1H3-230ENST00000527949 KAT6BQ8WYB5 2073 aa15.32■□□□□ 0.04
NR1H3-230ENST00000527949 MEGF6O75095 1541 aa15.32■□□□□ 0.04
NR1H3-230ENST00000527949 PRIM1P49642 420 aaKnown RBP15.31■□□□□ 0.04
NR1H3-230ENST00000527949 FLAD1Q8NFF5 587 aa15.31■□□□□ 0.04
NR1H3-230ENST00000527949 CCNL1Q9UK58 526 aaPredicted RBP15.31■□□□□ 0.04
NR1H3-230ENST00000527949 RAPGEF4Q8WZA2 1011 aa15.3■□□□□ 0.04
NR1H3-230ENST00000527949 CD2APQ9Y5K6 639 aa15.3■□□□□ 0.04
NR1H3-230ENST00000527949 EMILIN1Q9Y6C2 1016 aa15.3■□□□□ 0.04
NR1H3-230ENST00000527949 COL24A1Q17RW2 1714 aa15.29■□□□□ 0.04
NR1H3-230ENST00000527949 MSH5O43196 834 aa15.29■□□□□ 0.04
NR1H3-230ENST00000527949 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
NR1H3-230ENST00000527949 PANK3Q9H999 370 aa15.29■□□□□ 0.04
NR1H3-230ENST00000527949 POLKQ9UBT6 870 aa15.29■□□□□ 0.04
NR1H3-230ENST00000527949 TATP17735 454 aaPredicted RBP15.28■□□□□ 0.04
NR1H3-230ENST00000527949 PKD1L3Q7Z443 1732 aa15.27■□□□□ 0.04
NR1H3-230ENST00000527949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.27■□□□□ 0.04
NR1H3-230ENST00000527949 PCDH11XQ9BZA7 1347 aa15.26■□□□□ 0.03
NR1H3-230ENST00000527949 PCDH11YQ9BZA8 1340 aa15.26■□□□□ 0.03
NR1H3-230ENST00000527949 YBX3P16989 372 aaKnown RBP eCLIP15.26■□□□□ 0.03
NR1H3-230ENST00000527949 POLR3GLQ9BT43 218 aa15.26■□□□□ 0.03
NR1H3-230ENST00000527949 GPBP1L1Q9HC44 474 aaPredicted RBP15.26■□□□□ 0.03
NR1H3-230ENST00000527949 COL23A1Q86Y22 540 aaPredicted RBP15.25■□□□□ 0.03
NR1H3-230ENST00000527949 DOT1LQ8TEK3 1739 aa15.25■□□□□ 0.03
NR1H3-230ENST00000527949 KIF7Q2M1P5 1343 aa15.24■□□□□ 0.03
NR1H3-230ENST00000527949 KCNQ4P56696 695 aa15.24■□□□□ 0.03
NR1H3-230ENST00000527949 KNSTRNQ9Y448 316 aa15.24■□□□□ 0.03
NR1H3-230ENST00000527949 ATP10DQ9P241 1426 aa15.24■□□□□ 0.03
NR1H3-230ENST00000527949 LY75O60449 1722 aa15.23■□□□□ 0.03
NR1H3-230ENST00000527949 USHBP1Q8N6Y0 703 aa15.23■□□□□ 0.03
NR1H3-230ENST00000527949 EYA1Q99502 592 aa15.23■□□□□ 0.03
NR1H3-230ENST00000527949 HSPA6P17066 643 aa15.22■□□□□ 0.03
NR1H3-230ENST00000527949 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
NR1H3-230ENST00000527949 PPM1GO15355 546 aaPredicted RBP15.21■□□□□ 0.03
NR1H3-230ENST00000527949 AMER1Q5JTC6 1135 aaPredicted RBP15.21■□□□□ 0.03
NR1H3-230ENST00000527949 SMARCC1Q92922 1105 aaPredicted RBP15.21■□□□□ 0.03
NR1H3-230ENST00000527949 SPG7Q9UQ90 795 aa15.21■□□□□ 0.03
NR1H3-230ENST00000527949 NPC1L1Q9UHC9 1359 aa15.21■□□□□ 0.02
NR1H3-230ENST00000527949 IGSF1Q8N6C5 1336 aa15.2■□□□□ 0.02
NR1H3-230ENST00000527949 CYP27B1O15528 508 aa15.2■□□□□ 0.02
NR1H3-230ENST00000527949 EIF4A2Q14240 407 aaKnown RBP15.2■□□□□ 0.02
NR1H3-230ENST00000527949 MORC1Q86VD1 984 aa15.2■□□□□ 0.02
NR1H3-230ENST00000527949 GOLGB1Q14789 3259 aaKnown RBP15.19■□□□□ 0.02
NR1H3-230ENST00000527949 PER1O15534 1290 aaPredicted RBP15.19■□□□□ 0.02
NR1H3-230ENST00000527949 MSL1Q68DK7 614 aa15.19■□□□□ 0.02
NR1H3-230ENST00000527949 ADCY9O60503 1353 aa15.19■□□□□ 0.02
NR1H3-230ENST00000527949 AK7Q96M32 723 aa15.18■□□□□ 0.02
NR1H3-230ENST00000527949 PALLDQ8WX93 1383 aa15.18■□□□□ 0.02
NR1H3-230ENST00000527949 ITGB4P16144 1822 aa15.16■□□□□ 0.02
NR1H3-230ENST00000527949 TNNT2P45379 298 aaPredicted RBP15.16■□□□□ 0.02
NR1H3-230ENST00000527949 TOGARAM1Q9Y4F4 1720 aa15.16■□□□□ 0.02
NR1H3-230ENST00000527949 TUBGCP6Q96RT7 1819 aa15.15■□□□□ 0.02
NR1H3-230ENST00000527949 KDRP35968 1356 aa15.15■□□□□ 0.02
NR1H3-230ENST00000527949 SSFA2P28290 1259 aa15.15■□□□□ 0.02
NR1H3-230ENST00000527949 MPRIPQ6WCQ1 1025 aa15.15■□□□□ 0.02
NR1H3-230ENST00000527949 IFNL2Q8IZJ0 200 aa15.15■□□□□ 0.02
NR1H3-230ENST00000527949 CEP350Q5VT06 3117 aa15.14■□□□□ 0.01
NR1H3-230ENST00000527949 PHKG2P15735 406 aa15.13■□□□□ 0.01
NR1H3-230ENST00000527949 AMOTQ4VCS5 1084 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms