RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 TATP17735 454 aaPredicted RBP23.98■■□□□ 1.43
NXF1-206ENST00000527902 KDRP35968 1356 aa23.98■■□□□ 1.43
NXF1-206ENST00000527902 FAM196AQ6ZSG2 479 aa23.97■■□□□ 1.43
NXF1-206ENST00000527902 ZCRB1Q8TBF4 217 aaKnown RBP23.97■■□□□ 1.43
NXF1-206ENST00000527902 BCL9O00512 1426 aa23.95■■□□□ 1.42
NXF1-206ENST00000527902 SULT6B1Q6IMI4 303 aa23.95■■□□□ 1.42
NXF1-206ENST00000527902 PRKRIP1Q9H875 184 aaPredicted RBP23.95■■□□□ 1.42
NXF1-206ENST00000527902 DDX54Q8TDD1 881 aaKnown RBP23.94■■□□□ 1.42
NXF1-206ENST00000527902 CFAP53Q96M91 514 aa23.94■■□□□ 1.42
NXF1-206ENST00000527902 KAT6BQ8WYB5 2073 aa23.94■■□□□ 1.42
NXF1-206ENST00000527902 DOT1LQ8TEK3 1739 aa23.93■■□□□ 1.42
NXF1-206ENST00000527902 NHSQ6T4R5 1651 aa23.92■■□□□ 1.42
NXF1-206ENST00000527902 MYBBP1AQ9BQG0 1328 aaKnown RBP23.92■■□□□ 1.42
NXF1-206ENST00000527902 TRIM37O94972 964 aa23.92■■□□□ 1.42
NXF1-206ENST00000527902 HMOX1P09601 288 aa23.92■■□□□ 1.42
NXF1-206ENST00000527902 TOGARAM1Q9Y4F4 1720 aa23.9■■□□□ 1.42
NXF1-206ENST00000527902 U2SURPO15042 1029 aaKnown RBP23.9■■□□□ 1.42
NXF1-206ENST00000527902 CYP27B1O15528 508 aa23.9■■□□□ 1.42
NXF1-206ENST00000527902 PTF1AQ7RTS3 328 aa23.9■■□□□ 1.42
NXF1-206ENST00000527902 PLEKHG2Q9H7P9 1386 aa23.9■■□□□ 1.42
NXF1-206ENST00000527902 PCDH11XQ9BZA7 1347 aa23.89■■□□□ 1.42
NXF1-206ENST00000527902 PCDH11YQ9BZA8 1340 aa23.89■■□□□ 1.42
NXF1-206ENST00000527902 CCDC125Q86Z20 511 aa23.88■■□□□ 1.41
NXF1-206ENST00000527902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.88■■□□□ 1.417e-6■■□□□ 12.8
NXF1-206ENST00000527902 ACSBG1Q96GR2 724 aa23.86■■□□□ 1.41
NXF1-206ENST00000527902 SPG7Q9UQ90 795 aa23.86■■□□□ 1.41
NXF1-206ENST00000527902 BTAF1O14981 1849 aa23.86■■□□□ 1.41
NXF1-206ENST00000527902 KCNQ2O43526 872 aa23.85■■□□□ 1.41
NXF1-206ENST00000527902 DEFB132Q7Z7B7 95 aa23.85■■□□□ 1.41
NXF1-206ENST00000527902 ITGB4P16144 1822 aa23.84■■□□□ 1.41
NXF1-206ENST00000527902 NUDCQ9Y266 331 aa23.83■■□□□ 1.41
NXF1-206ENST00000527902 VIRMAQ69YN4 1812 aaKnown RBP23.82■■□□□ 1.4
NXF1-206ENST00000527902 U2AF1L5P0DN76 240 aaPredicted RBP23.82■■□□□ 1.4
NXF1-206ENST00000527902 PHKG2P15735 406 aa23.82■■□□□ 1.4
NXF1-206ENST00000527902 U2AF1Q01081 240 aaKnown RBP eCLIP23.82■■□□□ 1.4
NXF1-206ENST00000527902 PLEKHO1Q53GL0 409 aaPredicted RBP23.82■■□□□ 1.4
NXF1-206ENST00000527902 BCL11BQ9C0K0 894 aaPredicted RBP23.82■■□□□ 1.4
NXF1-206ENST00000527902 RSPH6AQ9H0K4 717 aa23.82■■□□□ 1.4
NXF1-206ENST00000527902 SF3B2Q13435 895 aaKnown RBP23.81■■□□□ 1.4
NXF1-206ENST00000527902 NKX1-1Q15270 411 aaPredicted RBP23.8■■□□□ 1.4
NXF1-206ENST00000527902 AMOTQ4VCS5 1084 aa23.8■■□□□ 1.4
NXF1-206ENST00000527902 ZNF530Q6P9A1 599 aaPredicted RBP23.8■■□□□ 1.4
NXF1-206ENST00000527902 RGPD3A6NKT7 1758 aaPredicted RBP23.8■■□□□ 1.4
NXF1-206ENST00000527902 RGPD4Q7Z3J3 1758 aa23.8■■□□□ 1.4
NXF1-206ENST00000527902 APBA3O96018 575 aa23.79■■□□□ 1.4
NXF1-206ENST00000527902 PRKAR2BP31323 418 aa23.79■■□□□ 1.4
NXF1-206ENST00000527902 IFNL2Q8IZJ0 200 aa23.79■■□□□ 1.4
NXF1-206ENST00000527902 PRIM1P49642 420 aaKnown RBP23.78■■□□□ 1.4
NXF1-206ENST00000527902 EN1Q05925 392 aaPredicted RBP23.78■■□□□ 1.4
NXF1-206ENST00000527902 RREB1Q92766 1687 aa23.78■■□□□ 1.4
NXF1-206ENST00000527902 SCN11AQ9UI33 1791 aa23.78■■□□□ 1.4
NXF1-206ENST00000527902 KDM6AO15550 1401 aaPredicted RBP23.77■■□□□ 1.4
NXF1-206ENST00000527902 BAG6P46379 1132 aa23.77■■□□□ 1.4
NXF1-206ENST00000527902 MTHFSDQ2M296 383 aaKnown RBP23.77■■□□□ 1.4
NXF1-206ENST00000527902 PHACTR3Q96KR7 559 aa23.77■■□□□ 1.4
NXF1-206ENST00000527902 ANP32CO43423 234 aa23.76■■□□□ 1.39
NXF1-206ENST00000527902 CCDC184Q52MB2 194 aa23.76■■□□□ 1.39
NXF1-206ENST00000527902 CAMKK2Q96RR4 588 aa23.75■■□□□ 1.39
NXF1-206ENST00000527902 ADAMTS7Q9UKP4 1686 aa23.74■■□□□ 1.39
NXF1-206ENST00000527902 FCHSD2O94868 740 aa23.74■■□□□ 1.39
NXF1-206ENST00000527902 EZH2Q15910 746 aaKnown RBP23.74■■□□□ 1.39
NXF1-206ENST00000527902 SYTL4Q96C24 671 aaPredicted RBP23.74■■□□□ 1.39
NXF1-206ENST00000527902 NUP188Q5SRE5 1749 aa23.73■■□□□ 1.39
NXF1-206ENST00000527902 C1orf141Q5JVX7 400 aa23.72■■□□□ 1.39
NXF1-206ENST00000527902 DLG5Q8TDM6 1919 aa23.72■■□□□ 1.39
NXF1-206ENST00000527902 LY75O60449 1722 aa23.71■■□□□ 1.39
NXF1-206ENST00000527902 AKAP4Q5JQC9 854 aa23.71■■□□□ 1.39
NXF1-206ENST00000527902 MPRIPQ6WCQ1 1025 aa23.71■■□□□ 1.39
NXF1-206ENST00000527902 PLSCR1O15162 318 aa23.7■■□□□ 1.38
NXF1-206ENST00000527902 DCAF5Q96JK2 942 aa23.7■■□□□ 1.38
NXF1-206ENST00000527902 PLEKHF1Q96S99 279 aa23.7■■□□□ 1.38
NXF1-206ENST00000527902 HSP90AB1P08238 724 aaKnown RBP23.69■■□□□ 1.38
NXF1-206ENST00000527902 PROM2Q8N271 834 aa23.68■■□□□ 1.38
NXF1-206ENST00000527902 PIGBQ92521 554 aa23.68■■□□□ 1.38
NXF1-206ENST00000527902 GAS2L2Q8NHY3 880 aa23.67■■□□□ 1.38
NXF1-206ENST00000527902 LGR6Q9HBX8 967 aa23.67■■□□□ 1.38
NXF1-206ENST00000527902 MAP3K5Q99683 1374 aa23.66■■□□□ 1.38
NXF1-206ENST00000527902 MRC1P22897 1456 aa23.66■■□□□ 1.38
NXF1-206ENST00000527902 ERVV-2B6SEH9 535 aa23.65■■□□□ 1.38
NXF1-206ENST00000527902 WDR43Q15061 677 aaKnown RBP eCLIP23.65■■□□□ 1.38
NXF1-206ENST00000527902 ADAMTS8Q9UP79 889 aa23.65■■□□□ 1.38
NXF1-206ENST00000527902 SIPA1L3O60292 1781 aaPredicted RBP23.65■■□□□ 1.38
NXF1-206ENST00000527902 RNMTO43148 476 aaKnown RBP23.64■■□□□ 1.37
NXF1-206ENST00000527902 TMOD3Q9NYL9 352 aa23.64■■□□□ 1.37
NXF1-206ENST00000527902 TXNRD1Q16881 649 aa23.63■■□□□ 1.37
NXF1-206ENST00000527902 GNAT3A8MTJ3 354 aa23.62■■□□□ 1.37
NXF1-206ENST00000527902 PAPPAQ13219 1627 aa23.62■■□□□ 1.37
NXF1-206ENST00000527902 CABP4P57796 275 aa23.61■■□□□ 1.37
NXF1-206ENST00000527902 CCDC146Q8IYE0 955 aa23.61■■□□□ 1.37
NXF1-206ENST00000527902 IL17REQ8NFR9 667 aa23.61■■□□□ 1.37
NXF1-206ENST00000527902 MRS2Q9HD23 443 aa23.61■■□□□ 1.37
NXF1-206ENST00000527902 NFATC2IPQ8NCF5 419 aa23.6■■□□□ 1.37
NXF1-206ENST00000527902 ASAP1Q9ULH1 1129 aa23.6■■□□□ 1.37
NXF1-206ENST00000527902 PALLDQ8WX93 1383 aa23.6■■□□□ 1.37
NXF1-206ENST00000527902 TAF1LQ8IZX4 1826 aa23.59■■□□□ 1.37
NXF1-206ENST00000527902 SLC52A2Q9HAB3 445 aa23.59■■□□□ 1.37
NXF1-206ENST00000527902 LRRC4BQ9NT99 713 aa23.59■■□□□ 1.37
NXF1-206ENST00000527902 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
NXF1-206ENST00000527902 CEMIPQ8WUJ3 1361 aa23.58■■□□□ 1.37
NXF1-206ENST00000527902 KCNQ4P56696 695 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms