RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 PTGER2P43116 358 aa26.54■■□□□ 1.84
CAPN1-211ENST00000527739 SLC15A2Q16348 729 aa26.54■■□□□ 1.84
CAPN1-211ENST00000527739 ZCRB1Q8TBF4 217 aaKnown RBP26.54■■□□□ 1.84
CAPN1-211ENST00000527739 RAPGEF4Q8WZA2 1011 aa26.54■■□□□ 1.84
CAPN1-211ENST00000527739 STK32BQ9NY57 414 aa26.54■■□□□ 1.84
CAPN1-211ENST00000527739 FLT4P35916 1363 aa26.54■■□□□ 1.84
CAPN1-211ENST00000527739 INSRP06213 1382 aa26.52■■□□□ 1.84
CAPN1-211ENST00000527739 SYTL4Q96C24 671 aaPredicted RBP26.51■■□□□ 1.83
CAPN1-211ENST00000527739 TATP17735 454 aaPredicted RBP26.5■■□□□ 1.83
CAPN1-211ENST00000527739 KIF20BQ96Q89 1820 aa26.49■■□□□ 1.83
CAPN1-211ENST00000527739 KIF24Q5T7B8 1368 aa26.48■■□□□ 1.83
CAPN1-211ENST00000527739 PAPPAQ13219 1627 aa26.47■■□□□ 1.83
CAPN1-211ENST00000527739 BTAF1O14981 1849 aa26.46■■□□□ 1.83
CAPN1-211ENST00000527739 PRIM1P49642 420 aaKnown RBP26.46■■□□□ 1.83
CAPN1-211ENST00000527739 POLKQ9UBT6 870 aa26.46■■□□□ 1.83
CAPN1-211ENST00000527739 MEGF6O75095 1541 aa26.45■■□□□ 1.83
CAPN1-211ENST00000527739 FAM208AQ9UK61 1670 aaKnown RBP26.45■■□□□ 1.82
CAPN1-211ENST00000527739 DCAF8L1A6NGE4 600 aa26.45■■□□□ 1.82
CAPN1-211ENST00000527739 SGIP1Q9BQI5 828 aa26.44■■□□□ 1.82
CAPN1-211ENST00000527739 WASHC2AQ641Q2 1341 aa26.43■■□□□ 1.82
CAPN1-211ENST00000527739 ZNF827Q17R98 1081 aa26.42■■□□□ 1.82
CAPN1-211ENST00000527739 FHDC1Q9C0D6 1143 aaPredicted RBP26.42■■□□□ 1.82
CAPN1-211ENST00000527739 MTFR1LQ9H019 292 aa26.42■■□□□ 1.82
CAPN1-211ENST00000527739 LRRC4BQ9NT99 713 aa26.42■■□□□ 1.82
CAPN1-211ENST00000527739 KNSTRNQ9Y448 316 aa26.42■■□□□ 1.82
CAPN1-211ENST00000527739 MORC1Q86VD1 984 aa26.41■■□□□ 1.82
CAPN1-211ENST00000527739 SYT17Q9BSW7 474 aa26.4■■□□□ 1.82
CAPN1-211ENST00000527739 RGPD2P0DJD1 1756 aa26.4■■□□□ 1.82
CAPN1-211ENST00000527739 KAT6BQ8WYB5 2073 aa26.38■■□□□ 1.81
CAPN1-211ENST00000527739 EYA1Q99502 592 aa26.38■■□□□ 1.81
CAPN1-211ENST00000527739 UTRNP46939 3433 aa26.37■■□□□ 1.81
CAPN1-211ENST00000527739 KIF7Q2M1P5 1343 aa26.37■■□□□ 1.81
CAPN1-211ENST00000527739 PCDH11XQ9BZA7 1347 aa26.37■■□□□ 1.81
CAPN1-211ENST00000527739 PCDH11YQ9BZA8 1340 aa26.37■■□□□ 1.81
CAPN1-211ENST00000527739 EIF4A2Q14240 407 aaKnown RBP26.34■■□□□ 1.81
CAPN1-211ENST00000527739 NSD2O96028 1365 aa26.33■■□□□ 1.81
CAPN1-211ENST00000527739 KCNQ4P56696 695 aa26.33■■□□□ 1.81
CAPN1-211ENST00000527739 AKT1S1Q96B36 256 aa26.33■■□□□ 1.81
CAPN1-211ENST00000527739 SPG7Q9UQ90 795 aa26.33■■□□□ 1.81
CAPN1-211ENST00000527739 SHANK3Q9BYB0 1731 aa26.32■■□□□ 1.8
CAPN1-211ENST00000527739 CYP27B1O15528 508 aa26.32■■□□□ 1.8
CAPN1-211ENST00000527739 SLC27A3Q5K4L6 730 aa26.32■■□□□ 1.8
CAPN1-211ENST00000527739 ARXQ96QS3 562 aa26.32■■□□□ 1.8
CAPN1-211ENST00000527739 DOT1LQ8TEK3 1739 aa26.31■■□□□ 1.8
CAPN1-211ENST00000527739 MPRIPQ6WCQ1 1025 aa26.3■■□□□ 1.8
CAPN1-211ENST00000527739 CCNL1Q9UK58 526 aaPredicted RBP26.28■■□□□ 1.8
CAPN1-211ENST00000527739 CNGB1Q14028 1251 aaPredicted RBP26.27■■□□□ 1.8
CAPN1-211ENST00000527739 PNPLA7Q6ZV29 1317 aa26.27■■□□□ 1.8
CAPN1-211ENST00000527739 MAP2P11137 1827 aaKnown RBP26.27■■□□□ 1.8
CAPN1-211ENST00000527739 TUBGCP6Q96RT7 1819 aa26.26■■□□□ 1.79
CAPN1-211ENST00000527739 AMER1Q5JTC6 1135 aaPredicted RBP26.25■■□□□ 1.79
CAPN1-211ENST00000527739 ZNF784Q8NCA9 323 aaPredicted RBP26.25■■□□□ 1.79
CAPN1-211ENST00000527739 TFCP2L1Q9NZI6 479 aa26.25■■□□□ 1.79
CAPN1-211ENST00000527739 QSER1Q2KHR3 1735 aa26.25■■□□□ 1.79
CAPN1-211ENST00000527739 MAP3K5Q99683 1374 aa26.24■■□□□ 1.79
CAPN1-211ENST00000527739 LY75O60449 1722 aa26.24■■□□□ 1.79
CAPN1-211ENST00000527739 CC2D1BQ5T0F9 858 aaKnown RBP26.23■■□□□ 1.79
CAPN1-211ENST00000527739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.23■■□□□ 1.792e-6■■□□□ 11.9
CAPN1-211ENST00000527739 IFNL2Q8IZJ0 200 aa26.22■■□□□ 1.79
CAPN1-211ENST00000527739 NCAPD2Q15021 1401 aa26.22■■□□□ 1.79
CAPN1-211ENST00000527739 ANKRD26Q9UPS8 1709 aa26.21■■□□□ 1.79
CAPN1-211ENST00000527739 IGSF1Q8N6C5 1336 aa26.2■■□□□ 1.79
CAPN1-211ENST00000527739 COL24A1Q17RW2 1714 aa26.2■■□□□ 1.79
CAPN1-211ENST00000527739 NKX1-1Q15270 411 aaPredicted RBP26.2■■□□□ 1.78
CAPN1-211ENST00000527739 KLHL34Q8N239 644 aa26.2■■□□□ 1.78
CAPN1-211ENST00000527739 SLC16A10Q8TF71 515 aa26.2■■□□□ 1.78
CAPN1-211ENST00000527739 PHKG2P15735 406 aa26.19■■□□□ 1.78
CAPN1-211ENST00000527739 PIGBQ92521 554 aa26.19■■□□□ 1.78
CAPN1-211ENST00000527739 PER1O15534 1290 aaPredicted RBP26.18■■□□□ 1.78
CAPN1-211ENST00000527739 MSH5O43196 834 aa26.18■■□□□ 1.78
CAPN1-211ENST00000527739 PLEKHO1Q53GL0 409 aaPredicted RBP26.18■■□□□ 1.78
CAPN1-211ENST00000527739 SMARCC1Q92922 1105 aaPredicted RBP26.18■■□□□ 1.78
CAPN1-211ENST00000527739 PALLDQ8WX93 1383 aa26.18■■□□□ 1.78
CAPN1-211ENST00000527739 TMOD3Q9NYL9 352 aa26.17■■□□□ 1.78
CAPN1-211ENST00000527739 CHD4Q14839 1912 aa26.16■■□□□ 1.78
CAPN1-211ENST00000527739 MTHFSP49914 203 aa26.16■■□□□ 1.78
CAPN1-211ENST00000527739 SULT6B1Q6IMI4 303 aa26.16■■□□□ 1.78
CAPN1-211ENST00000527739 POLD1P28340 1107 aa26.15■■□□□ 1.78
CAPN1-211ENST00000527739 AEBP1Q8IUX7 1158 aa26.15■■□□□ 1.78
CAPN1-211ENST00000527739 GPR162Q16538 588 aa26.14■■□□□ 1.78
CAPN1-211ENST00000527739 ZNF530Q6P9A1 599 aaPredicted RBP26.14■■□□□ 1.78
CAPN1-211ENST00000527739 NLGN2Q8NFZ4 835 aa26.14■■□□□ 1.78
CAPN1-211ENST00000527739 IL13P35225 146 aa26.13■■□□□ 1.77
CAPN1-211ENST00000527739 AMOTQ4VCS5 1084 aa26.12■■□□□ 1.77
CAPN1-211ENST00000527739 COL23A1Q86Y22 540 aaPredicted RBP26.12■■□□□ 1.77
CAPN1-211ENST00000527739 HMGB2P26583 209 aaKnown RBP26.11■■□□□ 1.77
CAPN1-211ENST00000527739 HSP90AB1P08238 724 aaKnown RBP26.1■■□□□ 1.77
CAPN1-211ENST00000527739 C1orf141Q5JVX7 400 aa26.1■■□□□ 1.77
CAPN1-211ENST00000527739 PELP1Q8IZL8 1130 aaKnown RBP26.1■■□□□ 1.77
CAPN1-211ENST00000527739 ASAP1Q9ULH1 1129 aa26.1■■□□□ 1.77
CAPN1-211ENST00000527739 PKD1L3Q7Z443 1732 aa26.1■■□□□ 1.77
CAPN1-211ENST00000527739 GOLGB1Q14789 3259 aaKnown RBP26.09■■□□□ 1.77
CAPN1-211ENST00000527739 DCAF5Q96JK2 942 aa26.08■■□□□ 1.77
CAPN1-211ENST00000527739 C5P01031 1676 aa26.07■■□□□ 1.76
CAPN1-211ENST00000527739 MSL1Q68DK7 614 aa26.07■■□□□ 1.76
CAPN1-211ENST00000527739 AK7Q96M32 723 aa26.07■■□□□ 1.76
CAPN1-211ENST00000527739 TOGARAM1Q9Y4F4 1720 aa26.07■■□□□ 1.76
CAPN1-211ENST00000527739 LOC102724428A0A0B4J2F2 783 aa26.06■■□□□ 1.76
CAPN1-211ENST00000527739 HMOX1P09601 288 aa26.06■■□□□ 1.76
CAPN1-211ENST00000527739 SIK1P57059 783 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms