RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 ATF3P18847 181 aa8.6□□□□□ -1.03
LINC01001-202ENST00000527683 IL21Q9HBE4 155 aa8.6□□□□□ -1.03
LINC01001-202ENST00000527683 AMOTL2Q9Y2J4 779 aa8.6□□□□□ -1.03
LINC01001-202ENST00000527683 ZFYVE9O95405 1425 aa8.6□□□□□ -1.03
LINC01001-202ENST00000527683 NCOA3Q9Y6Q9 1424 aa8.6□□□□□ -1.03
LINC01001-202ENST00000527683 SYNMO15061 1565 aa8.6□□□□□ -1.03
LINC01001-202ENST00000527683 RXRBP28702 533 aa8.59□□□□□ -1.03
LINC01001-202ENST00000527683 MDM2Q00987 491 aaPredicted RBP8.59□□□□□ -1.03
LINC01001-202ENST00000527683 BRINP3Q76B58 766 aa8.59□□□□□ -1.03
LINC01001-202ENST00000527683 ANKRD50Q9ULJ7 1429 aa8.59□□□□□ -1.03
LINC01001-202ENST00000527683 RIMS2Q9UQ26 1411 aa8.59□□□□□ -1.03
LINC01001-202ENST00000527683 TLL1O43897 1013 aa8.58□□□□□ -1.04
LINC01001-202ENST00000527683 PUS10Q3MIT2 529 aaKnown RBP8.58□□□□□ -1.04
LINC01001-202ENST00000527683 MEX3CQ5U5Q3 659 aaKnown RBP8.58□□□□□ -1.04
LINC01001-202ENST00000527683 TRIM52Q96A61 297 aa8.58□□□□□ -1.04
LINC01001-202ENST00000527683 PCDHB3Q9Y5E6 796 aa8.58□□□□□ -1.04
LINC01001-202ENST00000527683 CFAP65Q6ZU64 1925 aaKnown RBP8.58□□□□□ -1.04
LINC01001-202ENST00000527683 ADAMTS13Q76LX8 1427 aa8.57□□□□□ -1.04
LINC01001-202ENST00000527683 NUTM2BA6NNL0 878 aaPredicted RBP8.57□□□□□ -1.04
LINC01001-202ENST00000527683 NUTM2EB1AL46 878 aaPredicted RBP8.57□□□□□ -1.04
LINC01001-202ENST00000527683 ZPR1O75312 459 aa8.57□□□□□ -1.04
LINC01001-202ENST00000527683 NUTM2AQ8IVF1 878 aaPredicted RBP8.57□□□□□ -1.04
LINC01001-202ENST00000527683 PIK3C2BO00750 1634 aa8.57□□□□□ -1.04
LINC01001-202ENST00000527683 NKTRP30414 1462 aaKnown RBP8.57□□□□□ -1.04
LINC01001-202ENST00000527683 CD46P15529 392 aa8.56□□□□□ -1.04
LINC01001-202ENST00000527683 GCGRP47871 477 aa8.56□□□□□ -1.04
LINC01001-202ENST00000527683 PIK3R4Q99570 1358 aa8.56□□□□□ -1.04
LINC01001-202ENST00000527683 FUT2Q10981 343 aa8.55□□□□□ -1.04
LINC01001-202ENST00000527683 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
LINC01001-202ENST00000527683 RDH13Q8NBN7 331 aa8.55□□□□□ -1.04
LINC01001-202ENST00000527683 LRRC59Q96AG4 307 aaKnown RBP8.55□□□□□ -1.04
LINC01001-202ENST00000527683 QTRT2Q9H974 415 aaKnown RBP8.55□□□□□ -1.04
LINC01001-202ENST00000527683 RPRD2Q5VT52 1461 aaKnown RBP8.55□□□□□ -1.04
LINC01001-202ENST00000527683 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
LINC01001-202ENST00000527683 PTPN23Q9H3S7 1636 aa8.54□□□□□ -1.04
LINC01001-202ENST00000527683 CEP152O94986 1710 aa8.54□□□□□ -1.04
LINC01001-202ENST00000527683 ADGRL2O95490 1459 aa8.54□□□□□ -1.04
LINC01001-202ENST00000527683 SCUBE3Q8IX30 993 aa8.54□□□□□ -1.04
LINC01001-202ENST00000527683 CCER1Q8TC90 406 aaPredicted RBP8.54□□□□□ -1.04
LINC01001-202ENST00000527683 NECTIN2Q92692 538 aa8.54□□□□□ -1.04
LINC01001-202ENST00000527683 DDX17Q92841 729 aaKnown RBP8.54□□□□□ -1.04
LINC01001-202ENST00000527683 FAM217BQ9NTX9 383 aaPredicted RBP8.54□□□□□ -1.04
LINC01001-202ENST00000527683 XIRP1Q702N8 1843 aaKnown RBP8.54□□□□□ -1.04
LINC01001-202ENST00000527683 ROBO1Q9Y6N7 1651 aa8.53□□□□□ -1.04
LINC01001-202ENST00000527683 NUP155O75694 1391 aa8.53□□□□□ -1.04
LINC01001-202ENST00000527683 KMT5BQ4FZB7 885 aa8.53□□□□□ -1.04
LINC01001-202ENST00000527683 MORN1Q5T089 497 aa8.53□□□□□ -1.04
LINC01001-202ENST00000527683 HLA-CQ95604 372 aa8.53□□□□□ -1.04
LINC01001-202ENST00000527683 EMID1Q96A84 441 aaPredicted RBP8.53□□□□□ -1.04
LINC01001-202ENST00000527683 LRP6O75581 1613 aa8.53□□□□□ -1.04
LINC01001-202ENST00000527683 AFF2P51816 1311 aa8.53□□□□□ -1.04
LINC01001-202ENST00000527683 SLC4A3P48751 1232 aa8.52□□□□□ -1.05
LINC01001-202ENST00000527683 KRI1Q8N9T8 703 aaKnown RBP8.52□□□□□ -1.05
LINC01001-202ENST00000527683 ADGRB3O60242 1522 aa8.52□□□□□ -1.05
LINC01001-202ENST00000527683 NWD1Q149M9 1564 aa8.52□□□□□ -1.05
LINC01001-202ENST00000527683 METP08581 1390 aa8.51□□□□□ -1.05
LINC01001-202ENST00000527683 TRIM66O15016 1216 aa8.51□□□□□ -1.05
LINC01001-202ENST00000527683 RBM6P78332 1123 aaKnown RBP8.51□□□□□ -1.05
LINC01001-202ENST00000527683 AMHR2Q16671 573 aa8.51□□□□□ -1.05
LINC01001-202ENST00000527683 THAP11Q96EK4 314 aa8.51□□□□□ -1.05
LINC01001-202ENST00000527683 C8orf37Q96NL8 207 aa8.51□□□□□ -1.05
LINC01001-202ENST00000527683 PRR14Q9BWN1 585 aa8.51□□□□□ -1.05
LINC01001-202ENST00000527683 SLC24A3Q9HC58 644 aa8.51□□□□□ -1.05
LINC01001-202ENST00000527683 ROCK1Q13464 1354 aa8.5□□□□□ -1.05
LINC01001-202ENST00000527683 KDM5AP29375 1690 aaKnown RBP8.5□□□□□ -1.05
LINC01001-202ENST00000527683 ITGAEP38570 1179 aa8.5□□□□□ -1.05
LINC01001-202ENST00000527683 ZNF326Q5BKZ1 582 aaKnown RBP8.5□□□□□ -1.05
LINC01001-202ENST00000527683 NGLY1Q96IV0 654 aa8.5□□□□□ -1.05
LINC01001-202ENST00000527683 SETD5Q9C0A6 1442 aa8.5□□□□□ -1.05
LINC01001-202ENST00000527683 GPCPD1Q9NPB8 672 aa8.5□□□□□ -1.05
LINC01001-202ENST00000527683 SLC27A5Q9Y2P5 690 aa8.5□□□□□ -1.05
LINC01001-202ENST00000527683 CLSPNQ9HAW4 1339 aa8.5□□□□□ -1.05
LINC01001-202ENST00000527683 SULF1Q8IWU6 871 aa8.49□□□□□ -1.05
LINC01001-202ENST00000527683 GCC2Q8IWJ2 1684 aa8.49□□□□□ -1.05
LINC01001-202ENST00000527683 PPEF1O14829 653 aaPredicted RBP8.48□□□□□ -1.05
LINC01001-202ENST00000527683 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
LINC01001-202ENST00000527683 ATP6V1AP38606 617 aa8.48□□□□□ -1.05
LINC01001-202ENST00000527683 PARP9Q8IXQ6 854 aa8.48□□□□□ -1.05
LINC01001-202ENST00000527683 ORAI2Q96SN7 254 aa8.48□□□□□ -1.05
LINC01001-202ENST00000527683 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.48□□□□□ -1.05
LINC01001-202ENST00000527683 TMEM131LA2VDJ0 1609 aa8.47□□□□□ -1.05
LINC01001-202ENST00000527683 COL16A1Q07092 1604 aaPredicted RBP8.47□□□□□ -1.05
LINC01001-202ENST00000527683 MST1RQ04912 1400 aa8.47□□□□□ -1.05
LINC01001-202ENST00000527683 RNF223E7ERA6 249 aa8.47□□□□□ -1.05
LINC01001-202ENST00000527683 SSTR3P32745 418 aaPredicted RBP8.47□□□□□ -1.05
LINC01001-202ENST00000527683 CLCN1P35523 988 aa8.47□□□□□ -1.05
LINC01001-202ENST00000527683 RNF19BQ6ZMZ0 732 aa8.47□□□□□ -1.05
LINC01001-202ENST00000527683 FNBP4Q8N3X1 1017 aaPredicted RBP8.47□□□□□ -1.05
LINC01001-202ENST00000527683 FAM160A2Q8N612 972 aaPredicted RBP8.47□□□□□ -1.05
LINC01001-202ENST00000527683 SOS2Q07890 1332 aaPredicted RBP8.47□□□□□ -1.05
LINC01001-202ENST00000527683 PNPLA6Q8IY17 1366 aa8.47□□□□□ -1.05
LINC01001-202ENST00000527683 DCCP43146 1447 aa8.46□□□□□ -1.05
LINC01001-202ENST00000527683 CDK12Q9NYV4 1490 aaPredicted RBP8.46□□□□□ -1.05
LINC01001-202ENST00000527683 S1PR4O95977 384 aa8.46□□□□□ -1.06
LINC01001-202ENST00000527683 MS4A1P11836 297 aa8.46□□□□□ -1.06
LINC01001-202ENST00000527683 GUCA2AQ02747 115 aa8.46□□□□□ -1.06
LINC01001-202ENST00000527683 USP21Q9UK80 565 aa8.46□□□□□ -1.06
LINC01001-202ENST00000527683 CROCC2H7BZ55 1655 aa8.46□□□□□ -1.06
LINC01001-202ENST00000527683 PHLPP1O60346 1717 aa8.46□□□□□ -1.06
LINC01001-202ENST00000527683 AHDC1Q5TGY3 1603 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms