RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 RREB1Q92766 1687 aa35.97■■■■□ 3.35
TSPAN4-217ENST00000527644 RGPD3A6NKT7 1758 aaPredicted RBP35.97■■■■□ 3.35
TSPAN4-217ENST00000527644 RGPD4Q7Z3J3 1758 aa35.97■■■■□ 3.35
TSPAN4-217ENST00000527644 EYA1Q99502 592 aa35.96■■■■□ 3.35
TSPAN4-217ENST00000527644 NCAPD2Q15021 1401 aa35.96■■■■□ 3.35
TSPAN4-217ENST00000527644 NHSQ6T4R5 1651 aa35.95■■■■□ 3.35
TSPAN4-217ENST00000527644 EIF4A2Q14240 407 aaKnown RBP35.94■■■■□ 3.34
TSPAN4-217ENST00000527644 PSDA5PKW4 1024 aaPredicted RBP35.93■■■■□ 3.34
TSPAN4-217ENST00000527644 NBPF14Q5TI25 921 aa35.92■■■■□ 3.34
TSPAN4-217ENST00000527644 SHANK3Q9BYB0 1731 aa35.91■■■■□ 3.34
TSPAN4-217ENST00000527644 NUP188Q5SRE5 1749 aa35.91■■■■□ 3.34
TSPAN4-217ENST00000527644 R3HDM1Q15032 1099 aaKnown RBP35.9■■■■□ 3.34
TSPAN4-217ENST00000527644 KAT6BQ8WYB5 2073 aa35.9■■■■□ 3.34
TSPAN4-217ENST00000527644 PCDH11XQ9BZA7 1347 aa35.87■■■■□ 3.33
TSPAN4-217ENST00000527644 PCDH11YQ9BZA8 1340 aa35.87■■■■□ 3.33
TSPAN4-217ENST00000527644 CC2D1BQ5T0F9 858 aaKnown RBP35.87■■■■□ 3.33
TSPAN4-217ENST00000527644 PROM2Q8N271 834 aa35.87■■■■□ 3.33
TSPAN4-217ENST00000527644 NPC1L1Q9UHC9 1359 aa35.87■■■■□ 3.33
TSPAN4-217ENST00000527644 TXNRD1Q16881 649 aa35.84■■■■□ 3.33
TSPAN4-217ENST00000527644 IGSF1Q8N6C5 1336 aa35.83■■■■□ 3.33
TSPAN4-217ENST00000527644 PRIM1P49642 420 aaKnown RBP35.82■■■■□ 3.32
TSPAN4-217ENST00000527644 SPG7Q9UQ90 795 aa35.82■■■■□ 3.32
TSPAN4-217ENST00000527644 BTAF1O14981 1849 aa35.81■■■■□ 3.32
TSPAN4-217ENST00000527644 SRCAPQ6ZRS2 3230 aa35.81■■■■□ 3.32
TSPAN4-217ENST00000527644 SYTL4Q96C24 671 aaPredicted RBP35.81■■■■□ 3.32
TSPAN4-217ENST00000527644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.81■■■■□ 3.32
TSPAN4-217ENST00000527644 CYP27B1O15528 508 aa35.79■■■■□ 3.32
TSPAN4-217ENST00000527644 PKD1L3Q7Z443 1732 aa35.79■■■■□ 3.32
TSPAN4-217ENST00000527644 DOT1LQ8TEK3 1739 aa35.78■■■■□ 3.32
TSPAN4-217ENST00000527644 MTHFSP49914 203 aa35.78■■■■□ 3.32
TSPAN4-217ENST00000527644 PLEKHG2Q9H7P9 1386 aa35.76■■■■□ 3.32
TSPAN4-217ENST00000527644 IL13P35225 146 aa35.74■■■■□ 3.31
TSPAN4-217ENST00000527644 NKX1-1Q15270 411 aaPredicted RBP35.72■■■■□ 3.31
TSPAN4-217ENST00000527644 ANO8Q9HCE9 1232 aaPredicted RBP35.72■■■■□ 3.31
TSPAN4-217ENST00000527644 CNGB1Q14028 1251 aaPredicted RBP35.71■■■■□ 3.31
TSPAN4-217ENST00000527644 IFNL2Q8IZJ0 200 aa35.68■■■■□ 3.3
TSPAN4-217ENST00000527644 STK32BQ9NY57 414 aa35.68■■■■□ 3.3
TSPAN4-217ENST00000527644 SLC27A3Q5K4L6 730 aa35.67■■■■□ 3.3
TSPAN4-217ENST00000527644 LRP5O75197 1615 aa35.67■■■■□ 3.3
TSPAN4-217ENST00000527644 SULT6B1Q6IMI4 303 aa35.66■■■■□ 3.3
TSPAN4-217ENST00000527644 PHKG2P15735 406 aa35.65■■■■□ 3.3
TSPAN4-217ENST00000527644 PLEKHO1Q53GL0 409 aaPredicted RBP35.65■■■■□ 3.3
TSPAN4-217ENST00000527644 AEBP1Q8IUX7 1158 aa35.65■■■■□ 3.3
TSPAN4-217ENST00000527644 SLC15A2Q16348 729 aa35.64■■■■□ 3.3
TSPAN4-217ENST00000527644 AMOTQ4VCS5 1084 aa35.64■■■■□ 3.3
TSPAN4-217ENST00000527644 KDRP35968 1356 aa35.64■■■■□ 3.3
TSPAN4-217ENST00000527644 MPRIPQ6WCQ1 1025 aa35.63■■■■□ 3.29
TSPAN4-217ENST00000527644 LRRC4BQ9NT99 713 aa35.63■■■■□ 3.29
TSPAN4-217ENST00000527644 DIAPH1O60610 1272 aaKnown RBP35.62■■■■□ 3.29
TSPAN4-217ENST00000527644 TOGARAM1Q9Y4F4 1720 aa35.6■■■■□ 3.29
TSPAN4-217ENST00000527644 PAPPAQ13219 1627 aa35.58■■■■□ 3.29
TSPAN4-217ENST00000527644 LY75O60449 1722 aa35.57■■■■□ 3.29
TSPAN4-217ENST00000527644 ITGB4P16144 1822 aa35.56■■■■□ 3.28
TSPAN4-217ENST00000527644 HSP90AB1P08238 724 aaKnown RBP35.56■■■■□ 3.28
TSPAN4-217ENST00000527644 PIGBQ92521 554 aa35.56■■■■□ 3.28
TSPAN4-217ENST00000527644 ZNF530Q6P9A1 599 aaPredicted RBP35.55■■■■□ 3.28
TSPAN4-217ENST00000527644 CCNL1Q9UK58 526 aaPredicted RBP35.55■■■■□ 3.28
TSPAN4-217ENST00000527644 SMARCC1Q92922 1105 aaPredicted RBP35.54■■■■□ 3.28
TSPAN4-217ENST00000527644 TMOD3Q9NYL9 352 aa35.53■■■■□ 3.28
TSPAN4-217ENST00000527644 COL3A1P02461 1466 aaPredicted RBP35.53■■■■□ 3.28
TSPAN4-217ENST00000527644 KCNQ4P56696 695 aa35.52■■■■□ 3.28
TSPAN4-217ENST00000527644 DCAF5Q96JK2 942 aa35.52■■■■□ 3.28
TSPAN4-217ENST00000527644 SPON1Q9HCB6 807 aa35.52■■■■□ 3.28
TSPAN4-217ENST00000527644 PALLDQ8WX93 1383 aa35.51■■■■□ 3.28
TSPAN4-217ENST00000527644 HMOX1P09601 288 aa35.51■■■■□ 3.28
TSPAN4-217ENST00000527644 ZNF827Q17R98 1081 aa35.51■■■■□ 3.28
TSPAN4-217ENST00000527644 AKT1S1Q96B36 256 aa35.51■■■■□ 3.28
TSPAN4-217ENST00000527644 CASZ1Q86V15 1759 aa35.51■■■■□ 3.27
TSPAN4-217ENST00000527644 C1orf141Q5JVX7 400 aa35.5■■■■□ 3.27
TSPAN4-217ENST00000527644 CFAP53Q96M91 514 aa35.5■■■■□ 3.27
TSPAN4-217ENST00000527644 PDGFDQ9GZP0 370 aaPredicted RBP35.5■■■■□ 3.27
TSPAN4-217ENST00000527644 ERVV-2B6SEH9 535 aa35.49■■■■□ 3.27
TSPAN4-217ENST00000527644 HMGB2P26583 209 aaKnown RBP35.49■■■■□ 3.27
TSPAN4-217ENST00000527644 PPP2R1AP30153 589 aa35.49■■■■□ 3.27
TSPAN4-217ENST00000527644 ZEB1P37275 1124 aaPredicted RBP35.46■■■■□ 3.27
TSPAN4-217ENST00000527644 U2SURPO15042 1029 aaKnown RBP35.45■■■■□ 3.27
TSPAN4-217ENST00000527644 KDM6AO15550 1401 aaPredicted RBP35.42■■■■□ 3.26
TSPAN4-217ENST00000527644 ZBTB7AO95365 584 aa35.42■■■■□ 3.26
TSPAN4-217ENST00000527644 AKAP4Q5JQC9 854 aa35.42■■■■□ 3.26
TSPAN4-217ENST00000527644 TFCP2L1Q9NZI6 479 aa35.42■■■■□ 3.26
TSPAN4-217ENST00000527644 ASAP1Q9ULH1 1129 aa35.41■■■■□ 3.26
TSPAN4-217ENST00000527644 CABP4P57796 275 aa35.39■■■■□ 3.26
TSPAN4-217ENST00000527644 ATG3Q9NT62 314 aa35.39■■■■□ 3.26
TSPAN4-217ENST00000527644 NUDCQ9Y266 331 aa35.39■■■■□ 3.26
TSPAN4-217ENST00000527644 MTFR1LQ9H019 292 aa35.38■■■■□ 3.25
TSPAN4-217ENST00000527644 LOC102724428A0A0B4J2F2 783 aa35.37■■■■□ 3.25
TSPAN4-217ENST00000527644 SIK1P57059 783 aa35.37■■■■□ 3.25
TSPAN4-217ENST00000527644 QSER1Q2KHR3 1735 aa35.37■■■■□ 3.25
TSPAN4-217ENST00000527644 DDX10Q13206 875 aaKnown RBP35.36■■■■□ 3.25
TSPAN4-217ENST00000527644 MTHFSDQ2M296 383 aaKnown RBP35.36■■■■□ 3.25
TSPAN4-217ENST00000527644 ATF5Q9Y2D1 282 aaPredicted RBP35.36■■■■□ 3.25
TSPAN4-217ENST00000527644 PNPLA7Q6ZV29 1317 aa35.35■■■■□ 3.25
TSPAN4-217ENST00000527644 PPP1R1BQ9UD71 204 aaPredicted RBP35.35■■■■□ 3.25
TSPAN4-217ENST00000527644 C5P01031 1676 aa35.35■■■■□ 3.25
TSPAN4-217ENST00000527644 SLC16A10Q8TF71 515 aa35.33■■■■□ 3.25
TSPAN4-217ENST00000527644 TAF1LQ8IZX4 1826 aa35.32■■■■□ 3.25
TSPAN4-217ENST00000527644 PTGER2P43116 358 aa35.31■■■■□ 3.24
TSPAN4-217ENST00000527644 NFATC2IPQ8NCF5 419 aa35.31■■■■□ 3.24
TSPAN4-217ENST00000527644 TUBGCP6Q96RT7 1819 aa35.29■■■■□ 3.24
TSPAN4-217ENST00000527644 SCN11AQ9UI33 1791 aa35.29■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms