RNA–Protein interactions for RNA: ENST00000527340.1

CNTN2-204, Transcript of contactin 2, humanhuman

TSL 3

Gene CNTN2, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-204ENST00000527340 SLC24A1O60721 1099 aa23.46■■□□□ 1.35
CNTN2-204ENST00000527340 AMPHP49418 695 aa23.46■■□□□ 1.35
CNTN2-204ENST00000527340 KIF20BQ96Q89 1820 aa23.45■■□□□ 1.34
CNTN2-204ENST00000527340 GGNBP2Q9H3C7 697 aa23.45■■□□□ 1.34
CNTN2-204ENST00000527340 NBPF6Q5VWK0 638 aa23.44■■□□□ 1.34
CNTN2-204ENST00000527340 NBPF4Q96M43 638 aa23.44■■□□□ 1.34
CNTN2-204ENST00000527340 PRIM1P49642 420 aaKnown RBP23.43■■□□□ 1.34
CNTN2-204ENST00000527340 TMF1P82094 1093 aa23.43■■□□□ 1.34
CNTN2-204ENST00000527340 SLC27A3Q5K4L6 730 aa23.43■■□□□ 1.34
CNTN2-204ENST00000527340 KCNQ4P56696 695 aa23.42■■□□□ 1.34
CNTN2-204ENST00000527340 ZCRB1Q8TBF4 217 aaKnown RBP23.42■■□□□ 1.34
CNTN2-204ENST00000527340 MAP3K5Q99683 1374 aa23.41■■□□□ 1.34
CNTN2-204ENST00000527340 PNPLA7Q6ZV29 1317 aa23.41■■□□□ 1.34
CNTN2-204ENST00000527340 USHBP1Q8N6Y0 703 aa23.41■■□□□ 1.34
CNTN2-204ENST00000527340 DCAF8L1A6NGE4 600 aa23.4■■□□□ 1.34
CNTN2-204ENST00000527340 ARXQ96QS3 562 aa23.4■■□□□ 1.34
CNTN2-204ENST00000527340 SYTL4Q96C24 671 aaPredicted RBP23.39■■□□□ 1.33
CNTN2-204ENST00000527340 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
CNTN2-204ENST00000527340 CARD14Q9BXL6 1004 aa23.38■■□□□ 1.33
CNTN2-204ENST00000527340 INSRP06213 1382 aa23.38■■□□□ 1.33
CNTN2-204ENST00000527340 HSP90AB2PQ58FF8 381 aa23.37■■□□□ 1.33
CNTN2-204ENST00000527340 FLT4P35916 1363 aa23.36■■□□□ 1.33
CNTN2-204ENST00000527340 ANKRD26Q9UPS8 1709 aa23.36■■□□□ 1.33
CNTN2-204ENST00000527340 SMG6Q86US8 1419 aaKnown RBP23.35■■□□□ 1.33
CNTN2-204ENST00000527340 TOGARAM1Q9Y4F4 1720 aa23.35■■□□□ 1.33
CNTN2-204ENST00000527340 KIF24Q5T7B8 1368 aa23.35■■□□□ 1.33
CNTN2-204ENST00000527340 CGNL1Q0VF96 1302 aa23.34■■□□□ 1.33
CNTN2-204ENST00000527340 NCAPD2Q15021 1401 aa23.33■■□□□ 1.33
CNTN2-204ENST00000527340 NSD3Q9BZ95 1437 aa23.33■■□□□ 1.33
CNTN2-204ENST00000527340 SLC16A10Q8TF71 515 aa23.33■■□□□ 1.33
CNTN2-204ENST00000527340 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.32
CNTN2-204ENST00000527340 TFCP2L1Q9NZI6 479 aa23.31■■□□□ 1.32
CNTN2-204ENST00000527340 EMILIN1Q9Y6C2 1016 aa23.31■■□□□ 1.32
CNTN2-204ENST00000527340 C5P01031 1676 aa23.31■■□□□ 1.32
CNTN2-204ENST00000527340 CHD4Q14839 1912 aa23.3■■□□□ 1.32
CNTN2-204ENST00000527340 ZNF784Q8NCA9 323 aaPredicted RBP23.3■■□□□ 1.32
CNTN2-204ENST00000527340 RAPGEF4Q8WZA2 1011 aa23.3■■□□□ 1.32
CNTN2-204ENST00000527340 CCNL1Q9UK58 526 aaPredicted RBP23.3■■□□□ 1.32
CNTN2-204ENST00000527340 TATP17735 454 aaPredicted RBP23.29■■□□□ 1.32
CNTN2-204ENST00000527340 CDCA8Q53HL2 280 aa23.29■■□□□ 1.32
CNTN2-204ENST00000527340 CYP27B1O15528 508 aa23.28■■□□□ 1.32
CNTN2-204ENST00000527340 TAF1LQ8IZX4 1826 aa23.28■■□□□ 1.32
CNTN2-204ENST00000527340 PCDH11XQ9BZA7 1347 aa23.28■■□□□ 1.32
CNTN2-204ENST00000527340 PCDH11YQ9BZA8 1340 aa23.28■■□□□ 1.32
CNTN2-204ENST00000527340 ITGB4P16144 1822 aa23.26■■□□□ 1.31
CNTN2-204ENST00000527340 COL23A1Q86Y22 540 aaPredicted RBP23.26■■□□□ 1.31
CNTN2-204ENST00000527340 POLD1P28340 1107 aa23.24■■□□□ 1.31
CNTN2-204ENST00000527340 NLGN2Q8NFZ4 835 aa23.24■■□□□ 1.31
CNTN2-204ENST00000527340 PALLDQ8WX93 1383 aa23.24■■□□□ 1.31
CNTN2-204ENST00000527340 MAP2P11137 1827 aaKnown RBP23.22■■□□□ 1.31
CNTN2-204ENST00000527340 TIMELESSQ9UNS1 1208 aa23.22■■□□□ 1.31
CNTN2-204ENST00000527340 WASHC2AQ641Q2 1341 aa23.21■■□□□ 1.31
CNTN2-204ENST00000527340 C4BP0C0L5 1744 aa23.21■■□□□ 1.31
CNTN2-204ENST00000527340 MPRIPQ6WCQ1 1025 aa23.2■■□□□ 1.3
CNTN2-204ENST00000527340 AMIGO3Q86WK7 504 aa23.2■■□□□ 1.3
CNTN2-204ENST00000527340 KLHL34Q8N239 644 aa23.2■■□□□ 1.3
CNTN2-204ENST00000527340 NKX1-1Q15270 411 aaPredicted RBP23.18■■□□□ 1.3
CNTN2-204ENST00000527340 GPR162Q16538 588 aa23.18■■□□□ 1.3
CNTN2-204ENST00000527340 EYA1Q99502 592 aa23.18■■□□□ 1.3
CNTN2-204ENST00000527340 POLKQ9UBT6 870 aa23.18■■□□□ 1.3
CNTN2-204ENST00000527340 MSL1Q68DK7 614 aa23.17■■□□□ 1.3
CNTN2-204ENST00000527340 PIGBQ92521 554 aa23.17■■□□□ 1.3
CNTN2-204ENST00000527340 UBR3Q6ZT12 1888 aa23.17■■□□□ 1.3
CNTN2-204ENST00000527340 PPM1GO15355 546 aaPredicted RBP23.16■■□□□ 1.3
CNTN2-204ENST00000527340 CLSPNQ9HAW4 1339 aa23.15■■□□□ 1.3
CNTN2-204ENST00000527340 MSH5O43196 834 aa23.14■■□□□ 1.29
CNTN2-204ENST00000527340 YBX3P16989 372 aaKnown RBP eCLIP23.14■■□□□ 1.29
CNTN2-204ENST00000527340 SMIM5Q71RC9 77 aa23.12■■□□□ 1.29
CNTN2-204ENST00000527340 EIF4A2Q14240 407 aaKnown RBP23.11■■□□□ 1.29
CNTN2-204ENST00000527340 SMARCC1Q92922 1105 aaPredicted RBP23.11■■□□□ 1.29
CNTN2-204ENST00000527340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
CNTN2-204ENST00000527340 SPG7Q9UQ90 795 aa23.11■■□□□ 1.29
CNTN2-204ENST00000527340 PHKG2P15735 406 aa23.1■■□□□ 1.29
CNTN2-204ENST00000527340 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
CNTN2-204ENST00000527340 LINC00116Q8NCU8 138 aa23.09■■□□□ 1.29
CNTN2-204ENST00000527340 FLAD1Q8NFF5 587 aa23.09■■□□□ 1.29
CNTN2-204ENST00000527340 PLEKHG2Q9H7P9 1386 aa23.07■■□□□ 1.28
CNTN2-204ENST00000527340 LOC102724428A0A0B4J2F2 783 aa23.07■■□□□ 1.28
CNTN2-204ENST00000527340 TNNT2P45379 298 aaPredicted RBP23.07■■□□□ 1.28
CNTN2-204ENST00000527340 SIK1P57059 783 aa23.07■■□□□ 1.28
CNTN2-204ENST00000527340 ITPK1Q13572 414 aa23.07■■□□□ 1.28
CNTN2-204ENST00000527340 AK7Q96M32 723 aa23.07■■□□□ 1.28
CNTN2-204ENST00000527340 ASAP1Q9ULH1 1129 aa23.07■■□□□ 1.28
CNTN2-204ENST00000527340 IGSF1Q8N6C5 1336 aa23.07■■□□□ 1.28
CNTN2-204ENST00000527340 CEP350Q5VT06 3117 aa23.06■■□□□ 1.28
CNTN2-204ENST00000527340 POLR3GLQ9BT43 218 aa23.06■■□□□ 1.28
CNTN2-204ENST00000527340 PCGF6Q9BYE7 350 aa23.06■■□□□ 1.28
CNTN2-204ENST00000527340 KDRP35968 1356 aa23.05■■□□□ 1.28
CNTN2-204ENST00000527340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.05■■□□□ 1.28
CNTN2-204ENST00000527340 HSPA5P11021 654 aaKnown RBP23.05■■□□□ 1.28
CNTN2-204ENST00000527340 C1QTNF8P60827 252 aa23.05■■□□□ 1.28
CNTN2-204ENST00000527340 IFNL2Q8IZJ0 200 aa23.05■■□□□ 1.28
CNTN2-204ENST00000527340 TMOD3Q9NYL9 352 aa23.05■■□□□ 1.28
CNTN2-204ENST00000527340 CD2APQ9Y5K6 639 aa23.05■■□□□ 1.28
CNTN2-204ENST00000527340 PHF14O94880 888 aa23.04■■□□□ 1.28
CNTN2-204ENST00000527340 HMGB2P26583 209 aaKnown RBP23.03■■□□□ 1.28
CNTN2-204ENST00000527340 PANK3Q9H999 370 aa23.03■■□□□ 1.28
CNTN2-204ENST00000527340 ATG3Q9NT62 314 aa23.03■■□□□ 1.28
CNTN2-204ENST00000527340 SSFA2P28290 1259 aa23.02■■□□□ 1.28
CNTN2-204ENST00000527340 ZNF831Q5JPB2 1677 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms