RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 AMER1Q5JTC6 1135 aaPredicted RBP24.88■■□□□ 1.57
TRIM3-205ENST00000527237 CAMKK2Q96RR4 588 aa24.88■■□□□ 1.57
TRIM3-205ENST00000527237 PARD3Q8TEW0 1356 aa24.84■■□□□ 1.57
TRIM3-205ENST00000527237 PER1O15534 1290 aaPredicted RBP24.84■■□□□ 1.57
TRIM3-205ENST00000527237 MORC1Q86VD1 984 aa24.84■■□□□ 1.57
TRIM3-205ENST00000527237 ACSBG1Q96GR2 724 aa24.84■■□□□ 1.57
TRIM3-205ENST00000527237 KCNQ2O43526 872 aa24.83■■□□□ 1.57
TRIM3-205ENST00000527237 VIRMAQ69YN4 1812 aaKnown RBP24.83■■□□□ 1.57
TRIM3-205ENST00000527237 LY75O60449 1722 aa24.83■■□□□ 1.57
TRIM3-205ENST00000527237 DDX54Q8TDD1 881 aaKnown RBP24.82■■□□□ 1.56
TRIM3-205ENST00000527237 BCL11BQ9C0K0 894 aaPredicted RBP24.82■■□□□ 1.56
TRIM3-205ENST00000527237 PSDA5PKW4 1024 aaPredicted RBP24.81■■□□□ 1.56
TRIM3-205ENST00000527237 EIF4A2Q14240 407 aaKnown RBP24.81■■□□□ 1.56
TRIM3-205ENST00000527237 CC2D1BQ5T0F9 858 aaKnown RBP24.79■■□□□ 1.56
TRIM3-205ENST00000527237 ZCRB1Q8TBF4 217 aaKnown RBP24.79■■□□□ 1.56
TRIM3-205ENST00000527237 RAPGEF4Q8WZA2 1011 aa24.79■■□□□ 1.56
TRIM3-205ENST00000527237 EYA1Q99502 592 aa24.79■■□□□ 1.56
TRIM3-205ENST00000527237 LRP5O75197 1615 aa24.79■■□□□ 1.56
TRIM3-205ENST00000527237 PAPPAQ13219 1627 aa24.79■■□□□ 1.56
TRIM3-205ENST00000527237 TUBGCP6Q96RT7 1819 aa24.78■■□□□ 1.56
TRIM3-205ENST00000527237 TATP17735 454 aaPredicted RBP24.77■■□□□ 1.56
TRIM3-205ENST00000527237 CASZ1Q86V15 1759 aa24.76■■□□□ 1.55
TRIM3-205ENST00000527237 CNGB1Q14028 1251 aaPredicted RBP24.76■■□□□ 1.55
TRIM3-205ENST00000527237 R3HDM1Q15032 1099 aaKnown RBP24.74■■□□□ 1.55
TRIM3-205ENST00000527237 NPC1L1Q9UHC9 1359 aa24.73■■□□□ 1.55
TRIM3-205ENST00000527237 IGSF1Q8N6C5 1336 aa24.73■■□□□ 1.55
TRIM3-205ENST00000527237 PLSCR1O15162 318 aa24.73■■□□□ 1.55
TRIM3-205ENST00000527237 TAF1LQ8IZX4 1826 aa24.72■■□□□ 1.55
TRIM3-205ENST00000527237 PCDH11XQ9BZA7 1347 aa24.72■■□□□ 1.55
TRIM3-205ENST00000527237 PCDH11YQ9BZA8 1340 aa24.72■■□□□ 1.55
TRIM3-205ENST00000527237 COL3A1P02461 1466 aaPredicted RBP24.71■■□□□ 1.55
TRIM3-205ENST00000527237 PROM2Q8N271 834 aa24.71■■□□□ 1.55
TRIM3-205ENST00000527237 ANO8Q9HCE9 1232 aaPredicted RBP24.7■■□□□ 1.54
TRIM3-205ENST00000527237 CYP27B1O15528 508 aa24.69■■□□□ 1.54
TRIM3-205ENST00000527237 QSER1Q2KHR3 1735 aa24.69■■□□□ 1.54
TRIM3-205ENST00000527237 SYTL4Q96C24 671 aaPredicted RBP24.68■■□□□ 1.54
TRIM3-205ENST00000527237 C5P01031 1676 aa24.68■■□□□ 1.54
TRIM3-205ENST00000527237 SCN11AQ9UI33 1791 aa24.67■■□□□ 1.54
TRIM3-205ENST00000527237 SRCAPQ6ZRS2 3230 aa24.67■■□□□ 1.54
TRIM3-205ENST00000527237 PRIM1P49642 420 aaKnown RBP24.67■■□□□ 1.54
TRIM3-205ENST00000527237 MTHFSP49914 203 aa24.67■■□□□ 1.54
TRIM3-205ENST00000527237 TXNRD1Q16881 649 aa24.67■■□□□ 1.54
TRIM3-205ENST00000527237 AEBP1Q8IUX7 1158 aa24.67■■□□□ 1.54
TRIM3-205ENST00000527237 IL13P35225 146 aa24.64■■□□□ 1.54
TRIM3-205ENST00000527237 KDRP35968 1356 aa24.62■■□□□ 1.53
TRIM3-205ENST00000527237 NBPF14Q5TI25 921 aa24.61■■□□□ 1.53
TRIM3-205ENST00000527237 SPG7Q9UQ90 795 aa24.61■■□□□ 1.53
TRIM3-205ENST00000527237 PLEKHG2Q9H7P9 1386 aa24.59■■□□□ 1.53
TRIM3-205ENST00000527237 LRRC4BQ9NT99 713 aa24.59■■□□□ 1.53
TRIM3-205ENST00000527237 PHKG2P15735 406 aa24.58■■□□□ 1.53
TRIM3-205ENST00000527237 KCNQ4P56696 695 aa24.58■■□□□ 1.53
TRIM3-205ENST00000527237 SULT6B1Q6IMI4 303 aa24.58■■□□□ 1.53
TRIM3-205ENST00000527237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.58■■□□□ 1.53
TRIM3-205ENST00000527237 KDM6AO15550 1401 aaPredicted RBP24.56■■□□□ 1.52
TRIM3-205ENST00000527237 NKX1-1Q15270 411 aaPredicted RBP24.55■■□□□ 1.52
TRIM3-205ENST00000527237 PDGFDQ9GZP0 370 aaPredicted RBP24.55■■□□□ 1.52
TRIM3-205ENST00000527237 ADAMTS7Q9UKP4 1686 aa24.54■■□□□ 1.52
TRIM3-205ENST00000527237 HMOX1P09601 288 aa24.54■■□□□ 1.52
TRIM3-205ENST00000527237 MPRIPQ6WCQ1 1025 aa24.54■■□□□ 1.52
TRIM3-205ENST00000527237 C4BP0C0L5 1744 aa24.53■■□□□ 1.52
TRIM3-205ENST00000527237 DIAPH1O60610 1272 aaKnown RBP24.53■■□□□ 1.52
TRIM3-205ENST00000527237 ZNF827Q17R98 1081 aa24.53■■□□□ 1.52
TRIM3-205ENST00000527237 IFNL2Q8IZJ0 200 aa24.53■■□□□ 1.52
TRIM3-205ENST00000527237 UBR3Q6ZT12 1888 aa24.53■■□□□ 1.52
TRIM3-205ENST00000527237 ZNF530Q6P9A1 599 aaPredicted RBP24.52■■□□□ 1.52
TRIM3-205ENST00000527237 PALLDQ8WX93 1383 aa24.52■■□□□ 1.52
TRIM3-205ENST00000527237 COL5A3P25940 1745 aaPredicted RBP24.52■■□□□ 1.52
TRIM3-205ENST00000527237 SLC15A2Q16348 729 aa24.51■■□□□ 1.51
TRIM3-205ENST00000527237 STK32BQ9NY57 414 aa24.51■■□□□ 1.51
TRIM3-205ENST00000527237 COL24A1Q17RW2 1714 aa24.5■■□□□ 1.51
TRIM3-205ENST00000527237 PPP2R1AP30153 589 aa24.5■■□□□ 1.51
TRIM3-205ENST00000527237 PLEKHO1Q53GL0 409 aaPredicted RBP24.5■■□□□ 1.51
TRIM3-205ENST00000527237 PIGBQ92521 554 aa24.49■■□□□ 1.51
TRIM3-205ENST00000527237 SIPA1L3O60292 1781 aaPredicted RBP24.49■■□□□ 1.51
TRIM3-205ENST00000527237 ZNF831Q5JPB2 1677 aa24.48■■□□□ 1.51
TRIM3-205ENST00000527237 SLC27A3Q5K4L6 730 aa24.48■■□□□ 1.51
TRIM3-205ENST00000527237 DLG5Q8TDM6 1919 aa24.48■■□□□ 1.51
TRIM3-205ENST00000527237 CCNL1Q9UK58 526 aaPredicted RBP24.47■■□□□ 1.51
TRIM3-205ENST00000527237 TJP1Q07157 1748 aa24.47■■□□□ 1.51
TRIM3-205ENST00000527237 AMOTQ4VCS5 1084 aa24.46■■□□□ 1.51
TRIM3-205ENST00000527237 TMOD3Q9NYL9 352 aa24.46■■□□□ 1.51
TRIM3-205ENST00000527237 U2SURPO15042 1029 aaKnown RBP24.45■■□□□ 1.5
TRIM3-205ENST00000527237 AKT1S1Q96B36 256 aa24.45■■□□□ 1.5
TRIM3-205ENST00000527237 MRC1P22897 1456 aa24.44■■□□□ 1.5
TRIM3-205ENST00000527237 DDX10Q13206 875 aaKnown RBP24.43■■□□□ 1.5
TRIM3-205ENST00000527237 CICQ96RK0 1608 aaPredicted RBP24.43■■□□□ 1.5
TRIM3-205ENST00000527237 UBR2Q8IWV8 1755 aa24.42■■□□□ 1.5
TRIM3-205ENST00000527237 ZBTB7AO95365 584 aa24.42■■□□□ 1.5
TRIM3-205ENST00000527237 C1orf141Q5JVX7 400 aa24.42■■□□□ 1.5
TRIM3-205ENST00000527237 DCAF5Q96JK2 942 aa24.42■■□□□ 1.5
TRIM3-205ENST00000527237 ASAP1Q9ULH1 1129 aa24.42■■□□□ 1.5
TRIM3-205ENST00000527237 MYH14Q7Z406 1995 aaKnown RBP24.41■■□□□ 1.5
TRIM3-205ENST00000527237 PNPLA7Q6ZV29 1317 aa24.4■■□□□ 1.5
TRIM3-205ENST00000527237 HSP90AB1P08238 724 aaKnown RBP24.4■■□□□ 1.5
TRIM3-205ENST00000527237 CFAP53Q96M91 514 aa24.4■■□□□ 1.5
TRIM3-205ENST00000527237 MTHFSDQ2M296 383 aaKnown RBP24.39■■□□□ 1.49
TRIM3-205ENST00000527237 C4AP0C0L4 1744 aa24.38■■□□□ 1.49
TRIM3-205ENST00000527237 ERVV-2B6SEH9 535 aa24.38■■□□□ 1.49
TRIM3-205ENST00000527237 SMARCC1Q92922 1105 aaPredicted RBP24.38■■□□□ 1.49
TRIM3-205ENST00000527237 SPON1Q9HCB6 807 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms