RNA–Protein interactions for RNA: ENST00000527205.1

TTC39A-215, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-215ENST00000527205 COL3A1P02461 1466 aaPredicted RBP26.43■■□□□ 1.82
TTC39A-215ENST00000527205 MTHFSP49914 203 aa26.43■■□□□ 1.82
TTC39A-215ENST00000527205 RGPD3A6NKT7 1758 aaPredicted RBP26.42■■□□□ 1.82
TTC39A-215ENST00000527205 RGPD4Q7Z3J3 1758 aa26.42■■□□□ 1.82
TTC39A-215ENST00000527205 NUP188Q5SRE5 1749 aa26.42■■□□□ 1.82
TTC39A-215ENST00000527205 TOGARAM1Q9Y4F4 1720 aa26.42■■□□□ 1.82
TTC39A-215ENST00000527205 IGSF1Q8N6C5 1336 aa26.4■■□□□ 1.82
TTC39A-215ENST00000527205 TATP17735 454 aaPredicted RBP26.4■■□□□ 1.82
TTC39A-215ENST00000527205 BAG6P46379 1132 aa26.4■■□□□ 1.82
TTC39A-215ENST00000527205 EN1Q05925 392 aaPredicted RBP26.4■■□□□ 1.82
TTC39A-215ENST00000527205 ZCRB1Q8TBF4 217 aaKnown RBP26.4■■□□□ 1.82
TTC39A-215ENST00000527205 RAPGEF4Q8WZA2 1011 aa26.4■■□□□ 1.82
TTC39A-215ENST00000527205 DDX54Q8TDD1 881 aaKnown RBP26.39■■□□□ 1.82
TTC39A-215ENST00000527205 ACSBG1Q96GR2 724 aa26.38■■□□□ 1.81
TTC39A-215ENST00000527205 APBA3O96018 575 aa26.37■■□□□ 1.81
TTC39A-215ENST00000527205 IL13P35225 146 aa26.37■■□□□ 1.81
TTC39A-215ENST00000527205 DDX10Q13206 875 aaKnown RBP26.37■■□□□ 1.81
TTC39A-215ENST00000527205 ITGB4P16144 1822 aa26.37■■□□□ 1.81
TTC39A-215ENST00000527205 KCNQ2O43526 872 aa26.36■■□□□ 1.81
TTC39A-215ENST00000527205 EZH2Q15910 746 aaKnown RBP26.35■■□□□ 1.81
TTC39A-215ENST00000527205 AEBP1Q8IUX7 1158 aa26.35■■□□□ 1.81
TTC39A-215ENST00000527205 CAMKK2Q96RR4 588 aa26.33■■□□□ 1.81
TTC39A-215ENST00000527205 BCL11BQ9C0K0 894 aaPredicted RBP26.33■■□□□ 1.81
TTC39A-215ENST00000527205 VIRMAQ69YN4 1812 aaKnown RBP26.32■■□□□ 1.8
TTC39A-215ENST00000527205 PARD3Q8TEW0 1356 aa26.32■■□□□ 1.8
TTC39A-215ENST00000527205 CYP27B1O15528 508 aa26.31■■□□□ 1.8
TTC39A-215ENST00000527205 PPP2R1AP30153 589 aa26.31■■□□□ 1.8
TTC39A-215ENST00000527205 PCDH11XQ9BZA7 1347 aa26.31■■□□□ 1.8
TTC39A-215ENST00000527205 PCDH11YQ9BZA8 1340 aa26.31■■□□□ 1.8
TTC39A-215ENST00000527205 KDRP35968 1356 aa26.29■■□□□ 1.8
TTC39A-215ENST00000527205 DIAPH1O60610 1272 aaKnown RBP26.27■■□□□ 1.8
TTC39A-215ENST00000527205 SULT6B1Q6IMI4 303 aa26.27■■□□□ 1.8
TTC39A-215ENST00000527205 LY75O60449 1722 aa26.27■■□□□ 1.8
TTC39A-215ENST00000527205 PLEKHG2Q9H7P9 1386 aa26.23■■□□□ 1.79
TTC39A-215ENST00000527205 HMOX1P09601 288 aa26.23■■□□□ 1.79
TTC39A-215ENST00000527205 SPG7Q9UQ90 795 aa26.23■■□□□ 1.79
TTC39A-215ENST00000527205 PLSCR1O15162 318 aa26.22■■□□□ 1.79
TTC39A-215ENST00000527205 PRIM1P49642 420 aaKnown RBP26.22■■□□□ 1.79
TTC39A-215ENST00000527205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.22■■□□□ 1.79
TTC39A-215ENST00000527205 SCN11AQ9UI33 1791 aa26.21■■□□□ 1.79
TTC39A-215ENST00000527205 PHKG2P15735 406 aa26.21■■□□□ 1.79
TTC39A-215ENST00000527205 PROM2Q8N271 834 aa26.2■■□□□ 1.78
TTC39A-215ENST00000527205 SYTL4Q96C24 671 aaPredicted RBP26.2■■□□□ 1.78
TTC39A-215ENST00000527205 PAPPAQ13219 1627 aa26.2■■□□□ 1.78
TTC39A-215ENST00000527205 NKX1-1Q15270 411 aaPredicted RBP26.18■■□□□ 1.78
TTC39A-215ENST00000527205 ZNF316A6NFI3 1004 aaPredicted RBP26.17■■□□□ 1.78
TTC39A-215ENST00000527205 U2SURPO15042 1029 aaKnown RBP26.17■■□□□ 1.78
TTC39A-215ENST00000527205 IFNL2Q8IZJ0 200 aa26.17■■□□□ 1.78
TTC39A-215ENST00000527205 KDM6AO15550 1401 aaPredicted RBP26.16■■□□□ 1.78
TTC39A-215ENST00000527205 PLEKHO1Q53GL0 409 aaPredicted RBP26.16■■□□□ 1.78
TTC39A-215ENST00000527205 CFAP53Q96M91 514 aa26.16■■□□□ 1.78
TTC39A-215ENST00000527205 PSDA5PKW4 1024 aaPredicted RBP26.15■■□□□ 1.78
TTC39A-215ENST00000527205 TXNRD1Q16881 649 aa26.15■■□□□ 1.78
TTC39A-215ENST00000527205 ZNF530Q6P9A1 599 aaPredicted RBP26.15■■□□□ 1.78
TTC39A-215ENST00000527205 TAF1LQ8IZX4 1826 aa26.14■■□□□ 1.78
TTC39A-215ENST00000527205 TUBGCP6Q96RT7 1819 aa26.14■■□□□ 1.78
TTC39A-215ENST00000527205 ADAMTS7Q9UKP4 1686 aa26.13■■□□□ 1.77
TTC39A-215ENST00000527205 AMOTQ4VCS5 1084 aa26.13■■□□□ 1.77
TTC39A-215ENST00000527205 ANO8Q9HCE9 1232 aaPredicted RBP26.13■■□□□ 1.77
TTC39A-215ENST00000527205 RALBP1Q15311 655 aa26.11■■□□□ 1.77
TTC39A-215ENST00000527205 C5P01031 1676 aa26.1■■□□□ 1.77
TTC39A-215ENST00000527205 R3HDM1Q15032 1099 aaKnown RBP26.1■■□□□ 1.77
TTC39A-215ENST00000527205 MPRIPQ6WCQ1 1025 aa26.1■■□□□ 1.77
TTC39A-215ENST00000527205 LRRC4BQ9NT99 713 aa26.09■■□□□ 1.77
TTC39A-215ENST00000527205 CASZ1Q86V15 1759 aa26.09■■□□□ 1.77
TTC39A-215ENST00000527205 MTHFSDQ2M296 383 aaKnown RBP26.08■■□□□ 1.77
TTC39A-215ENST00000527205 PIGBQ92521 554 aa26.08■■□□□ 1.77
TTC39A-215ENST00000527205 RSPH6AQ9H0K4 717 aa26.08■■□□□ 1.77
TTC39A-215ENST00000527205 DLG5Q8TDM6 1919 aa26.08■■□□□ 1.76
TTC39A-215ENST00000527205 KCNQ4P56696 695 aa26.07■■□□□ 1.76
TTC39A-215ENST00000527205 MYBBP1AQ9BQG0 1328 aaKnown RBP26.06■■□□□ 1.76
TTC39A-215ENST00000527205 QSER1Q2KHR3 1735 aa26.05■■□□□ 1.76
TTC39A-215ENST00000527205 C1orf141Q5JVX7 400 aa26.05■■□□□ 1.76
TTC39A-215ENST00000527205 PRKRIP1Q9H875 184 aaPredicted RBP26.05■■□□□ 1.76
TTC39A-215ENST00000527205 NUDCQ9Y266 331 aa26.05■■□□□ 1.76
TTC39A-215ENST00000527205 PALLDQ8WX93 1383 aa26.05■■□□□ 1.76
TTC39A-215ENST00000527205 SIPA1L3O60292 1781 aaPredicted RBP26.05■■□□□ 1.76
TTC39A-215ENST00000527205 U2AF1L5P0DN76 240 aaPredicted RBP26.04■■□□□ 1.76
TTC39A-215ENST00000527205 PRKAR2BP31323 418 aa26.04■■□□□ 1.76
TTC39A-215ENST00000527205 U2AF1Q01081 240 aaKnown RBP eCLIP26.04■■□□□ 1.76
TTC39A-215ENST00000527205 DCAF5Q96JK2 942 aa26.04■■□□□ 1.76
TTC39A-215ENST00000527205 HSP90AB1P08238 724 aaKnown RBP26.03■■□□□ 1.76
TTC39A-215ENST00000527205 AKAP4Q5JQC9 854 aa26.03■■□□□ 1.76
TTC39A-215ENST00000527205 TMOD3Q9NYL9 352 aa26.03■■□□□ 1.76
TTC39A-215ENST00000527205 MRC1P22897 1456 aa26.03■■□□□ 1.76
TTC39A-215ENST00000527205 NBPF14Q5TI25 921 aa26.02■■□□□ 1.76
TTC39A-215ENST00000527205 PHACTR3Q96KR7 559 aa26.02■■□□□ 1.76
TTC39A-215ENST00000527205 LRP5O75197 1615 aa26■■□□□ 1.75
TTC39A-215ENST00000527205 ERVV-2B6SEH9 535 aa26■■□□□ 1.75
TTC39A-215ENST00000527205 ZNF827Q17R98 1081 aa26■■□□□ 1.75
TTC39A-215ENST00000527205 LGR6Q9HBX8 967 aa26■■□□□ 1.75
TTC39A-215ENST00000527205 ASAP1Q9ULH1 1129 aa25.99■■□□□ 1.75
TTC39A-215ENST00000527205 C4BP0C0L5 1744 aa25.98■■□□□ 1.75
TTC39A-215ENST00000527205 SLC27A3Q5K4L6 730 aa25.98■■□□□ 1.75
TTC39A-215ENST00000527205 CCNL1Q9UK58 526 aaPredicted RBP25.98■■□□□ 1.75
TTC39A-215ENST00000527205 COL5A3P25940 1745 aaPredicted RBP25.97■■□□□ 1.75
TTC39A-215ENST00000527205 ZNF831Q5JPB2 1677 aa25.97■■□□□ 1.75
TTC39A-215ENST00000527205 RNMTO43148 476 aaKnown RBP25.97■■□□□ 1.75
TTC39A-215ENST00000527205 ATG3Q9NT62 314 aa25.97■■□□□ 1.75
TTC39A-215ENST00000527205 MAP3K5Q99683 1374 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms