RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 MCM10Q7L590 875 aa13.47□□□□□ -0.25
PTPMT1-204ENST00000527079 MAP3K19Q56UN5 1328 aa13.47□□□□□ -0.25
PTPMT1-204ENST00000527079 NCOA3Q9Y6Q9 1424 aa13.46□□□□□ -0.25
PTPMT1-204ENST00000527079 ANKRD44Q8N8A2 993 aa13.46□□□□□ -0.25
PTPMT1-204ENST00000527079 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
PTPMT1-204ENST00000527079 THEMISQ8N1K5 641 aaPredicted RBP13.45□□□□□ -0.26
PTPMT1-204ENST00000527079 ANKARQ7Z5J8 1434 aa13.45□□□□□ -0.26
PTPMT1-204ENST00000527079 ATP10DQ9P241 1426 aa13.45□□□□□ -0.26
PTPMT1-204ENST00000527079 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
PTPMT1-204ENST00000527079 CDC45O75419 566 aa13.44□□□□□ -0.26
PTPMT1-204ENST00000527079 CEBPAP49715 358 aaPredicted RBP13.44□□□□□ -0.26
PTPMT1-204ENST00000527079 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
PTPMT1-204ENST00000527079 RTF1Q92541 710 aaKnown RBP13.44□□□□□ -0.26
PTPMT1-204ENST00000527079 XRN1Q8IZH2 1706 aaKnown RBP13.44□□□□□ -0.26
PTPMT1-204ENST00000527079 MCM4P33991 863 aa13.44□□□□□ -0.26
PTPMT1-204ENST00000527079 GAS2L2Q8NHY3 880 aa13.44□□□□□ -0.26
PTPMT1-204ENST00000527079 FER1L4A9Z1Z3 1794 aa13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 PIK3C2AO00443 1686 aa13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 HTATSF1O43719 755 aaKnown RBP13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 KRT24Q2M2I5 525 aa13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 IGSF1Q8N6C5 1336 aa13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 MTHFSDQ2M296 383 aaKnown RBP13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 USP54Q70EL1 1684 aa13.43□□□□□ -0.26
PTPMT1-204ENST00000527079 AMPHP49418 695 aa13.42□□□□□ -0.26
PTPMT1-204ENST00000527079 CEP85Q6P2H3 762 aa13.42□□□□□ -0.26
PTPMT1-204ENST00000527079 CIZ1Q9ULV3 898 aaPredicted RBP13.42□□□□□ -0.26
PTPMT1-204ENST00000527079 MSH6P52701 1360 aa13.42□□□□□ -0.26
PTPMT1-204ENST00000527079 SOX12O15370 315 aa13.42□□□□□ -0.26
PTPMT1-204ENST00000527079 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
PTPMT1-204ENST00000527079 DDIT3P35638 169 aa13.42□□□□□ -0.26
PTPMT1-204ENST00000527079 KIF2CQ99661 725 aa13.42□□□□□ -0.26
PTPMT1-204ENST00000527079 TSPYL4Q9UJ04 414 aa13.42□□□□□ -0.26
PTPMT1-204ENST00000527079 TTC22Q5TAA0 569 aa13.41□□□□□ -0.26
PTPMT1-204ENST00000527079 EYA1Q99502 592 aa13.41□□□□□ -0.26
PTPMT1-204ENST00000527079 CACNA1FO60840 1977 aa13.4□□□□□ -0.26
PTPMT1-204ENST00000527079 LRRC37A3O60309 1634 aa13.4□□□□□ -0.26
PTPMT1-204ENST00000527079 HMMRO75330 724 aa13.4□□□□□ -0.26
PTPMT1-204ENST00000527079 GSPT1P15170 499 aaKnown RBP13.4□□□□□ -0.26
PTPMT1-204ENST00000527079 CCT4P50991 539 aaKnown RBP13.4□□□□□ -0.26
PTPMT1-204ENST00000527079 L1TD1Q5T7N2 865 aaKnown RBP13.4□□□□□ -0.26
PTPMT1-204ENST00000527079 BRPF3Q9ULD4 1205 aa13.4□□□□□ -0.26
PTPMT1-204ENST00000527079 CEP170BQ9Y4F5 1589 aaPredicted RBP13.4□□□□□ -0.26
PTPMT1-204ENST00000527079 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
PTPMT1-204ENST00000527079 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
PTPMT1-204ENST00000527079 FOXO3O43524 673 aa13.39□□□□□ -0.27
PTPMT1-204ENST00000527079 DDX11L8A8MPP1 907 aa13.38□□□□□ -0.27
PTPMT1-204ENST00000527079 NLRP6P59044 892 aa13.38□□□□□ -0.27
PTPMT1-204ENST00000527079 MEIS3Q99687 375 aa13.38□□□□□ -0.27
PTPMT1-204ENST00000527079 BABAM1Q9NWV8 329 aa13.38□□□□□ -0.27
PTPMT1-204ENST00000527079 MARF1Q9Y4F3 1742 aaKnown RBP13.38□□□□□ -0.27
PTPMT1-204ENST00000527079 K7ELQ4 463 aaPredicted RBP13.37□□□□□ -0.27
PTPMT1-204ENST00000527079 STK31Q9BXU1 1019 aa13.37□□□□□ -0.27
PTPMT1-204ENST00000527079 MIS18AQ9NYP9 233 aa13.37□□□□□ -0.27
PTPMT1-204ENST00000527079 GNAT3A8MTJ3 354 aa13.37□□□□□ -0.27
PTPMT1-204ENST00000527079 HOXC9P31274 260 aa13.37□□□□□ -0.27
PTPMT1-204ENST00000527079 CASC1Q6TDU7 716 aa13.36□□□□□ -0.27
PTPMT1-204ENST00000527079 RABEP1Q15276 862 aa13.36□□□□□ -0.27
PTPMT1-204ENST00000527079 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
PTPMT1-204ENST00000527079 FAM208AQ9UK61 1670 aaKnown RBP13.35□□□□□ -0.27
PTPMT1-204ENST00000527079 NWD1Q149M9 1564 aa13.35□□□□□ -0.27
PTPMT1-204ENST00000527079 TRAK2O60296 914 aa13.35□□□□□ -0.27
PTPMT1-204ENST00000527079 KCNA6P17658 529 aa13.35□□□□□ -0.27
PTPMT1-204ENST00000527079 PTMSP20962 102 aa13.35□□□□□ -0.27
PTPMT1-204ENST00000527079 C16orf71Q8IYS4 520 aaPredicted RBP13.35□□□□□ -0.27
PTPMT1-204ENST00000527079 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
PTPMT1-204ENST00000527079 GNAI2P04899 355 aa13.34□□□□□ -0.27
PTPMT1-204ENST00000527079 HSP90AA1P07900 732 aaKnown RBP13.34□□□□□ -0.27
PTPMT1-204ENST00000527079 RAB3GAP1Q15042 981 aa13.34□□□□□ -0.27
PTPMT1-204ENST00000527079 G2E3Q7L622 706 aa13.34□□□□□ -0.27
PTPMT1-204ENST00000527079 GBP4Q96PP9 640 aa13.34□□□□□ -0.27
PTPMT1-204ENST00000527079 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
PTPMT1-204ENST00000527079 N4BP2Q86UW6 1770 aaPredicted RBP13.34□□□□□ -0.27
PTPMT1-204ENST00000527079 SLC4A10Q6U841 1118 aa13.34□□□□□ -0.27
PTPMT1-204ENST00000527079 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
PTPMT1-204ENST00000527079 GNAI3P08754 354 aa13.33□□□□□ -0.28
PTPMT1-204ENST00000527079 ABTB2Q8N961 1025 aa13.33□□□□□ -0.28
PTPMT1-204ENST00000527079 FSD2A1L4K1 749 aa13.33□□□□□ -0.28
PTPMT1-204ENST00000527079 SDSP20132 328 aa13.33□□□□□ -0.28
PTPMT1-204ENST00000527079 FLIIQ13045 1269 aa13.33□□□□□ -0.28
PTPMT1-204ENST00000527079 TNPO1Q92973 898 aaKnown RBP13.33□□□□□ -0.28
PTPMT1-204ENST00000527079 PXDNLA1KZ92 1463 aa13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 GOLGA6L3A6NEY3 463 aa13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 F6X3S4 739 aa13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 CD2BP2O95400 341 aaKnown RBP13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 OTUD7AQ8TE49 926 aaPredicted RBP13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 SMARCA5O60264 1052 aaPredicted RBP13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 REC8O95072 547 aa13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 TAF7Q15545 349 aaPredicted RBP13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 PLPPR3Q6T4P5 718 aa13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 ISY1Q9ULR0 285 aaKnown RBP13.32□□□□□ -0.28
PTPMT1-204ENST00000527079 CHD2O14647 1828 aaKnown RBP13.31□□□□□ -0.28
PTPMT1-204ENST00000527079 FKBP5Q13451 457 aaPredicted RBP13.31□□□□□ -0.28
PTPMT1-204ENST00000527079 LTN1O94822 1766 aa13.3□□□□□ -0.28
PTPMT1-204ENST00000527079 SKOR2Q2VWA4 1001 aaPredicted RBP13.3□□□□□ -0.28
PTPMT1-204ENST00000527079 IL17REQ8NFR9 667 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms