RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 SLIT3O75094 1523 aa20.19■□□□□ 0.82
FOXRED1-207ENST00000527004 TMEM57Q8N5G2 664 aa20.18■□□□□ 0.82
FOXRED1-207ENST00000527004 GCP02774 474 aa20.18■□□□□ 0.82
FOXRED1-207ENST00000527004 USP19O94966 1318 aa20.18■□□□□ 0.82
FOXRED1-207ENST00000527004 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
FOXRED1-207ENST00000527004 ELL2O00472 640 aaPredicted RBP20.16■□□□□ 0.82
FOXRED1-207ENST00000527004 ARHGEF25Q86VW2 580 aa20.16■□□□□ 0.82
FOXRED1-207ENST00000527004 SKAP1Q86WV1 359 aa20.16■□□□□ 0.82
FOXRED1-207ENST00000527004 ZBTB40Q9NUA8 1239 aa20.16■□□□□ 0.82
FOXRED1-207ENST00000527004 HDAC1Q13547 482 aaPredicted RBP20.16■□□□□ 0.82
FOXRED1-207ENST00000527004 CADPS2Q86UW7 1296 aa20.16■□□□□ 0.82
FOXRED1-207ENST00000527004 API5Q9BZZ5 524 aaKnown RBP20.16■□□□□ 0.82
FOXRED1-207ENST00000527004 LTN1O94822 1766 aa20.15■□□□□ 0.82
FOXRED1-207ENST00000527004 TRPM3Q9HCF6 1732 aaPredicted RBP20.15■□□□□ 0.82
FOXRED1-207ENST00000527004 BABAM1Q9NWV8 329 aa20.15■□□□□ 0.82
FOXRED1-207ENST00000527004 ANP32AP39687 249 aaKnown RBP20.14■□□□□ 0.81
FOXRED1-207ENST00000527004 LTV1Q96GA3 475 aaPredicted RBP20.14■□□□□ 0.81
FOXRED1-207ENST00000527004 ABCC4O15439 1325 aa20.13■□□□□ 0.81
FOXRED1-207ENST00000527004 XPCQ01831 940 aaPredicted RBP20.13■□□□□ 0.81
FOXRED1-207ENST00000527004 FAM161AQ3B820 660 aa20.13■□□□□ 0.81
FOXRED1-207ENST00000527004 MAP3K5Q99683 1374 aa20.12■□□□□ 0.81
FOXRED1-207ENST00000527004 RGS3P49796 1198 aa20.11■□□□□ 0.81
FOXRED1-207ENST00000527004 NBPF6Q5VWK0 638 aa20.11■□□□□ 0.81
FOXRED1-207ENST00000527004 NBPF4Q96M43 638 aa20.11■□□□□ 0.81
FOXRED1-207ENST00000527004 ZBTB7BO15156 539 aaPredicted RBP20.11■□□□□ 0.81
FOXRED1-207ENST00000527004 TSPYL4Q9UJ04 414 aa20.11■□□□□ 0.81
FOXRED1-207ENST00000527004 STRCP1A6NGW2 1772 aa20.1■□□□□ 0.81
FOXRED1-207ENST00000527004 SOS1Q07889 1333 aaPredicted RBP20.1■□□□□ 0.81
FOXRED1-207ENST00000527004 MSH6P52701 1360 aa20.1■□□□□ 0.81
FOXRED1-207ENST00000527004 LRRC37A3O60309 1634 aa20.09■□□□□ 0.81
FOXRED1-207ENST00000527004 NCAPD2Q15021 1401 aa20.09■□□□□ 0.81
FOXRED1-207ENST00000527004 MSH5O43196 834 aa20.08■□□□□ 0.81
FOXRED1-207ENST00000527004 LMOD2Q6P5Q4 547 aa20.08■□□□□ 0.81
FOXRED1-207ENST00000527004 PTPRCP08575 1304 aa20.08■□□□□ 0.8
FOXRED1-207ENST00000527004 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.8
FOXRED1-207ENST00000527004 C8orf34Q49A92 452 aa20.07■□□□□ 0.8
FOXRED1-207ENST00000527004 IL17REQ8NFR9 667 aa20.07■□□□□ 0.8
FOXRED1-207ENST00000527004 PDZRN3Q9UPQ7 1066 aa20.07■□□□□ 0.8
FOXRED1-207ENST00000527004 TAF7Q15545 349 aaPredicted RBP20.06■□□□□ 0.8
FOXRED1-207ENST00000527004 KRT24Q2M2I5 525 aa20.06■□□□□ 0.8
FOXRED1-207ENST00000527004 AMOTQ4VCS5 1084 aa20.06■□□□□ 0.8
FOXRED1-207ENST00000527004 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
FOXRED1-207ENST00000527004 USHBP1Q8N6Y0 703 aa20.06■□□□□ 0.8
FOXRED1-207ENST00000527004 ALS2Q96Q42 1657 aa20.06■□□□□ 0.8
FOXRED1-207ENST00000527004 IPO9Q96P70 1041 aaKnown RBP20.06■□□□□ 0.8
FOXRED1-207ENST00000527004 CEMIPQ8WUJ3 1361 aa20.05■□□□□ 0.8
FOXRED1-207ENST00000527004 INTS3Q68E01 1043 aaKnown RBP20.05■□□□□ 0.8
FOXRED1-207ENST00000527004 MIS18AQ9NYP9 233 aa20.05■□□□□ 0.8
FOXRED1-207ENST00000527004 ZBTB7CA1YPR0 619 aa20.04■□□□□ 0.8
FOXRED1-207ENST00000527004 PLEKHO1Q53GL0 409 aaPredicted RBP20.04■□□□□ 0.8
FOXRED1-207ENST00000527004 ANKRD24Q8TF21 1146 aa20.04■□□□□ 0.8
FOXRED1-207ENST00000527004 AKAP4Q5JQC9 854 aa20.02■□□□□ 0.8
FOXRED1-207ENST00000527004 STRCQ7RTU9 1775 aa20.01■□□□□ 0.79
FOXRED1-207ENST00000527004 SLC4A2P04920 1241 aa20.01■□□□□ 0.79
FOXRED1-207ENST00000527004 LRRC59Q96AG4 307 aaKnown RBP20.01■□□□□ 0.79
FOXRED1-207ENST00000527004 MED1Q15648 1581 aaPredicted RBP20.01■□□□□ 0.79
FOXRED1-207ENST00000527004 RGS12O14924 1447 aa20.01■□□□□ 0.79
FOXRED1-207ENST00000527004 TNS3Q68CZ2 1445 aa20.01■□□□□ 0.79
FOXRED1-207ENST00000527004 AXIN2Q9Y2T1 843 aa20■□□□□ 0.79
FOXRED1-207ENST00000527004 CAMTA1Q9Y6Y1 1673 aa20■□□□□ 0.79
FOXRED1-207ENST00000527004 CCDC30Q5VVM6 783 aa20■□□□□ 0.79
FOXRED1-207ENST00000527004 GCC1Q96CN9 775 aa19.99■□□□□ 0.79
FOXRED1-207ENST00000527004 STK31Q9BXU1 1019 aa19.99■□□□□ 0.79
FOXRED1-207ENST00000527004 ERBB3P21860 1342 aa19.99■□□□□ 0.79
FOXRED1-207ENST00000527004 SPATA31A3Q5VYP0 1347 aa19.99■□□□□ 0.79
FOXRED1-207ENST00000527004 PXDNQ92626 1479 aa19.99■□□□□ 0.79
FOXRED1-207ENST00000527004 CHMP4AQ9BY43 222 aa19.98■□□□□ 0.79
FOXRED1-207ENST00000527004 ABCC6O95255 1503 aa19.98■□□□□ 0.79
FOXRED1-207ENST00000527004 OVOS2A0A0G2JMS6 1433 aa19.98■□□□□ 0.79
FOXRED1-207ENST00000527004 ZNF530Q6P9A1 599 aaPredicted RBP19.97■□□□□ 0.79
FOXRED1-207ENST00000527004 PLEKHG2Q9H7P9 1386 aa19.97■□□□□ 0.79
FOXRED1-207ENST00000527004 ZC3H6P61129 1189 aaKnown RBP19.96■□□□□ 0.79
FOXRED1-207ENST00000527004 NUCB1Q02818 461 aa19.96■□□□□ 0.79
FOXRED1-207ENST00000527004 HOXB7P09629 217 aa19.95■□□□□ 0.78
FOXRED1-207ENST00000527004 C1orf141Q5JVX7 400 aa19.95■□□□□ 0.78
FOXRED1-207ENST00000527004 NPM2Q86SE8 214 aaKnown RBP19.95■□□□□ 0.78
FOXRED1-207ENST00000527004 DDX17Q92841 729 aaKnown RBP19.95■□□□□ 0.78
FOXRED1-207ENST00000527004 NOP58Q9Y2X3 529 aaKnown RBP19.95■□□□□ 0.78
FOXRED1-207ENST00000527004 LMO7Q8WWI1 1683 aa19.95■□□□□ 0.78
FOXRED1-207ENST00000527004 BRINP3Q76B58 766 aa19.95■□□□□ 0.78
FOXRED1-207ENST00000527004 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
FOXRED1-207ENST00000527004 PLEKHG5O94827 1062 aa19.94■□□□□ 0.78
FOXRED1-207ENST00000527004 DDRGK1Q96HY6 314 aa19.94■□□□□ 0.78
FOXRED1-207ENST00000527004 ANP32EQ9BTT0 268 aa19.94■□□□□ 0.78
FOXRED1-207ENST00000527004 LGR6Q9HBX8 967 aa19.94■□□□□ 0.78
FOXRED1-207ENST00000527004 ZBTB47Q9UFB7 747 aaPredicted RBP19.94■□□□□ 0.78
FOXRED1-207ENST00000527004 CPDO75976 1380 aa19.94■□□□□ 0.78
FOXRED1-207ENST00000527004 CCT4P50991 539 aaKnown RBP19.93■□□□□ 0.78
FOXRED1-207ENST00000527004 XIRP1Q702N8 1843 aaKnown RBP19.93■□□□□ 0.78
FOXRED1-207ENST00000527004 RGPD2P0DJD1 1756 aa19.93■□□□□ 0.78
FOXRED1-207ENST00000527004 TEFQ10587 303 aa19.93■□□□□ 0.78
FOXRED1-207ENST00000527004 RPAP2Q8IXW5 612 aaPredicted RBP19.93■□□□□ 0.78
FOXRED1-207ENST00000527004 RNMTO43148 476 aaKnown RBP19.92■□□□□ 0.78
FOXRED1-207ENST00000527004 CHD1LQ86WJ1 897 aa19.92■□□□□ 0.78
FOXRED1-207ENST00000527004 SIRT2Q8IXJ6 389 aa19.92■□□□□ 0.78
FOXRED1-207ENST00000527004 SLAIN2Q9P270 581 aa19.92■□□□□ 0.78
FOXRED1-207ENST00000527004 EIF4A1P60842 406 aaKnown RBP19.91■□□□□ 0.78
FOXRED1-207ENST00000527004 G2E3Q7L622 706 aa19.91■□□□□ 0.78
FOXRED1-207ENST00000527004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.91■□□□□ 0.78
FOXRED1-207ENST00000527004 ZNF335Q9H4Z2 1342 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms