RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
SSSCA1-203ENST00000526877 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
SSSCA1-203ENST00000526877 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
SSSCA1-203ENST00000526877 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
SSSCA1-203ENST00000526877 KAT6BQ8WYB5 2073 aa17.1■□□□□ 0.33
SSSCA1-203ENST00000526877 KIF24Q5T7B8 1368 aa17.1■□□□□ 0.33
SSSCA1-203ENST00000526877 NBPF14Q5TI25 921 aa17.09■□□□□ 0.33
SSSCA1-203ENST00000526877 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
SSSCA1-203ENST00000526877 INSRP06213 1382 aa17.09■□□□□ 0.33
SSSCA1-203ENST00000526877 ANKRD26Q9UPS8 1709 aa17.09■□□□□ 0.33
SSSCA1-203ENST00000526877 MAP2P11137 1827 aaKnown RBP17.08■□□□□ 0.33
SSSCA1-203ENST00000526877 NHSQ6T4R5 1651 aa17.08■□□□□ 0.32
SSSCA1-203ENST00000526877 ACSBG1Q96GR2 724 aa17.08■□□□□ 0.32
SSSCA1-203ENST00000526877 EMILIN1Q9Y6C2 1016 aa17.08■□□□□ 0.32
SSSCA1-203ENST00000526877 FLT4P35916 1363 aa17.07■□□□□ 0.32
SSSCA1-203ENST00000526877 MEGF6O75095 1541 aa17.06■□□□□ 0.32
SSSCA1-203ENST00000526877 TXNRD1Q16881 649 aa17.06■□□□□ 0.32
SSSCA1-203ENST00000526877 DDX54Q8TDD1 881 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-203ENST00000526877 SHANK3Q9BYB0 1731 aa17.06■□□□□ 0.32
SSSCA1-203ENST00000526877 USHBP1Q8N6Y0 703 aa17.05■□□□□ 0.32
SSSCA1-203ENST00000526877 ZCRB1Q8TBF4 217 aaKnown RBP17.05■□□□□ 0.32
SSSCA1-203ENST00000526877 ANO8Q9HCE9 1232 aaPredicted RBP17.05■□□□□ 0.32
SSSCA1-203ENST00000526877 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
SSSCA1-203ENST00000526877 POLKQ9UBT6 870 aa17.04■□□□□ 0.32
SSSCA1-203ENST00000526877 BTAF1O14981 1849 aa17.04■□□□□ 0.32
SSSCA1-203ENST00000526877 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
SSSCA1-203ENST00000526877 SMG6Q86US8 1419 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-203ENST00000526877 PPM1GO15355 546 aaPredicted RBP17■□□□□ 0.31
SSSCA1-203ENST00000526877 TNNT2P45379 298 aaPredicted RBP17■□□□□ 0.31
SSSCA1-203ENST00000526877 NCAPD2Q15021 1401 aa17■□□□□ 0.31
SSSCA1-203ENST00000526877 RAPGEF4Q8WZA2 1011 aa17■□□□□ 0.31
SSSCA1-203ENST00000526877 TATP17735 454 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-203ENST00000526877 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
SSSCA1-203ENST00000526877 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
SSSCA1-203ENST00000526877 EYA1Q99502 592 aa16.98■□□□□ 0.31
SSSCA1-203ENST00000526877 PDGFDQ9GZP0 370 aaPredicted RBP16.98■□□□□ 0.31
SSSCA1-203ENST00000526877 DOT1LQ8TEK3 1739 aa16.98■□□□□ 0.31
SSSCA1-203ENST00000526877 CASZ1Q86V15 1759 aa16.97■□□□□ 0.31
SSSCA1-203ENST00000526877 SLC15A2Q16348 729 aa16.97■□□□□ 0.31
SSSCA1-203ENST00000526877 LRRC4BQ9NT99 713 aa16.97■□□□□ 0.31
SSSCA1-203ENST00000526877 PAPPAQ13219 1627 aa16.96■□□□□ 0.3
SSSCA1-203ENST00000526877 CYP27B1O15528 508 aa16.95■□□□□ 0.3
SSSCA1-203ENST00000526877 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
SSSCA1-203ENST00000526877 SPON1Q9HCB6 807 aa16.95■□□□□ 0.3
SSSCA1-203ENST00000526877 STK32BQ9NY57 414 aa16.95■□□□□ 0.3
SSSCA1-203ENST00000526877 PKD1L3Q7Z443 1732 aa16.94■□□□□ 0.3
SSSCA1-203ENST00000526877 SYTL4Q96C24 671 aaPredicted RBP16.94■□□□□ 0.3
SSSCA1-203ENST00000526877 CFAP53Q96M91 514 aa16.94■□□□□ 0.3
SSSCA1-203ENST00000526877 MTHFSP49914 203 aa16.93■□□□□ 0.3
SSSCA1-203ENST00000526877 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
SSSCA1-203ENST00000526877 PCDH11XQ9BZA7 1347 aa16.93■□□□□ 0.3
SSSCA1-203ENST00000526877 PCDH11YQ9BZA8 1340 aa16.93■□□□□ 0.3
SSSCA1-203ENST00000526877 LY75O60449 1722 aa16.93■□□□□ 0.3
SSSCA1-203ENST00000526877 SLC27A3Q5K4L6 730 aa16.92■□□□□ 0.3
SSSCA1-203ENST00000526877 NKX1-1Q15270 411 aaPredicted RBP16.91■□□□□ 0.3
SSSCA1-203ENST00000526877 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
SSSCA1-203ENST00000526877 PNISRQ8TF01 805 aaKnown RBP16.91■□□□□ 0.3
SSSCA1-203ENST00000526877 AKT1S1Q96B36 256 aa16.91■□□□□ 0.3
SSSCA1-203ENST00000526877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.91■□□□□ 0.3
SSSCA1-203ENST00000526877 KCNQ4P56696 695 aa16.9■□□□□ 0.3
SSSCA1-203ENST00000526877 IGSF1Q8N6C5 1336 aa16.9■□□□□ 0.3
SSSCA1-203ENST00000526877 ITGB4P16144 1822 aa16.89■□□□□ 0.29
SSSCA1-203ENST00000526877 ZBTB7AO95365 584 aa16.89■□□□□ 0.29
SSSCA1-203ENST00000526877 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
SSSCA1-203ENST00000526877 SPG7Q9UQ90 795 aa16.89■□□□□ 0.29
SSSCA1-203ENST00000526877 TOGARAM1Q9Y4F4 1720 aa16.89■□□□□ 0.29
SSSCA1-203ENST00000526877 PTGER2P43116 358 aa16.88■□□□□ 0.29
SSSCA1-203ENST00000526877 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
SSSCA1-203ENST00000526877 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
SSSCA1-203ENST00000526877 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
SSSCA1-203ENST00000526877 SGIP1Q9BQI5 828 aa16.86■□□□□ 0.29
SSSCA1-203ENST00000526877 QSER1Q2KHR3 1735 aa16.85■□□□□ 0.29
SSSCA1-203ENST00000526877 PHKG2P15735 406 aa16.85■□□□□ 0.29
SSSCA1-203ENST00000526877 PIGBQ92521 554 aa16.85■□□□□ 0.29
SSSCA1-203ENST00000526877 MTFR1LQ9H019 292 aa16.85■□□□□ 0.29
SSSCA1-203ENST00000526877 CCNL1Q9UK58 526 aaPredicted RBP16.85■□□□□ 0.29
SSSCA1-203ENST00000526877 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
SSSCA1-203ENST00000526877 PLEKHG2Q9H7P9 1386 aa16.85■□□□□ 0.29
SSSCA1-203ENST00000526877 IL13P35225 146 aa16.84■□□□□ 0.29
SSSCA1-203ENST00000526877 IFNL2Q8IZJ0 200 aa16.84■□□□□ 0.29
SSSCA1-203ENST00000526877 PPP1R1BQ9UD71 204 aaPredicted RBP16.84■□□□□ 0.29
SSSCA1-203ENST00000526877 TUBGCP6Q96RT7 1819 aa16.84■□□□□ 0.29
SSSCA1-203ENST00000526877 PNPLA7Q6ZV29 1317 aa16.83■□□□□ 0.28
SSSCA1-203ENST00000526877 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
SSSCA1-203ENST00000526877 AEBP1Q8IUX7 1158 aa16.82■□□□□ 0.28
SSSCA1-203ENST00000526877 TAF1LQ8IZX4 1826 aa16.82■□□□□ 0.28
SSSCA1-203ENST00000526877 PALLDQ8WX93 1383 aa16.81■□□□□ 0.28
SSSCA1-203ENST00000526877 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
SSSCA1-203ENST00000526877 ADAMTS8Q9UP79 889 aa16.81■□□□□ 0.28
SSSCA1-203ENST00000526877 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
SSSCA1-203ENST00000526877 COL24A1Q17RW2 1714 aa16.8■□□□□ 0.28
SSSCA1-203ENST00000526877 SLC16A10Q8TF71 515 aa16.8■□□□□ 0.28
SSSCA1-203ENST00000526877 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
SSSCA1-203ENST00000526877 KDRP35968 1356 aa16.79■□□□□ 0.28
SSSCA1-203ENST00000526877 C5P01031 1676 aa16.79■□□□□ 0.28
SSSCA1-203ENST00000526877 HNRNPUQ00839 825 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSSCA1-203ENST00000526877 PLEKHO1Q53GL0 409 aaPredicted RBP16.79■□□□□ 0.28
SSSCA1-203ENST00000526877 SULT6B1Q6IMI4 303 aa16.79■□□□□ 0.28
SSSCA1-203ENST00000526877 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
SSSCA1-203ENST00000526877 AMOTQ4VCS5 1084 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms