RNA–Protein interactions for RNA: ENST00000526118.1

CAPN11-203, Transcript of calpain 11, humanhuman

TSL 4

Gene CAPN11, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-203ENST00000526118 USP31Q70CQ4 1352 aa16.42■□□□□ 0.22
CAPN11-203ENST00000526118 NME9Q86XW9 330 aa16.41■□□□□ 0.22
CAPN11-203ENST00000526118 USP54Q70EL1 1684 aa16.4■□□□□ 0.22
CAPN11-203ENST00000526118 APLP1P51693 650 aa16.4■□□□□ 0.22
CAPN11-203ENST00000526118 LTV1Q96GA3 475 aaPredicted RBP16.4■□□□□ 0.22
CAPN11-203ENST00000526118 FAM208AQ9UK61 1670 aaKnown RBP16.4■□□□□ 0.22
CAPN11-203ENST00000526118 USP47Q96K76 1375 aa16.39■□□□□ 0.21
CAPN11-203ENST00000526118 NSD2O96028 1365 aa16.38■□□□□ 0.21
CAPN11-203ENST00000526118 KIF3CO14782 793 aa16.37■□□□□ 0.21
CAPN11-203ENST00000526118 HMGB2P26583 209 aaKnown RBP16.37■□□□□ 0.21
CAPN11-203ENST00000526118 FLAD1Q8NFF5 587 aa16.37■□□□□ 0.21
CAPN11-203ENST00000526118 WWC3Q9ULE0 1092 aa16.37■□□□□ 0.21
CAPN11-203ENST00000526118 IGSF1Q8N6C5 1336 aa16.36■□□□□ 0.21
CAPN11-203ENST00000526118 C5P01031 1676 aa16.36■□□□□ 0.21
CAPN11-203ENST00000526118 HDGFL2Q7Z4V5 671 aaPredicted RBP16.35■□□□□ 0.21
CAPN11-203ENST00000526118 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
CAPN11-203ENST00000526118 IP6K1Q92551 441 aa16.35■□□□□ 0.21
CAPN11-203ENST00000526118 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
CAPN11-203ENST00000526118 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
CAPN11-203ENST00000526118 ROCK2O75116 1388 aaKnown RBP16.33■□□□□ 0.2
CAPN11-203ENST00000526118 TOMM70O94826 608 aa16.32■□□□□ 0.2
CAPN11-203ENST00000526118 TAF1LQ8IZX4 1826 aa16.32■□□□□ 0.2
CAPN11-203ENST00000526118 RGPD2P0DJD1 1756 aa16.31■□□□□ 0.2
CAPN11-203ENST00000526118 EDC4Q6P2E9 1401 aaKnown RBP16.31■□□□□ 0.2
CAPN11-203ENST00000526118 CAPN15O75808 1086 aa16.3■□□□□ 0.2
CAPN11-203ENST00000526118 DNAJC5GQ8N7S2 189 aa16.3■□□□□ 0.2
CAPN11-203ENST00000526118 AK7Q96M32 723 aa16.3■□□□□ 0.2
CAPN11-203ENST00000526118 MEGF6O75095 1541 aa16.29■□□□□ 0.2
CAPN11-203ENST00000526118 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
CAPN11-203ENST00000526118 AMPHP49418 695 aa16.29■□□□□ 0.2
CAPN11-203ENST00000526118 L3MBTL2Q969R5 705 aa16.29■□□□□ 0.2
CAPN11-203ENST00000526118 PALLDQ8WX93 1383 aa16.28■□□□□ 0.2
CAPN11-203ENST00000526118 PHF14O94880 888 aa16.28■□□□□ 0.2
CAPN11-203ENST00000526118 TERF2IPQ9NYB0 399 aa16.28■□□□□ 0.2
CAPN11-203ENST00000526118 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
CAPN11-203ENST00000526118 WDR90Q96KV7 1748 aa16.28■□□□□ 0.2
CAPN11-203ENST00000526118 HOXC9P31274 260 aa16.27■□□□□ 0.2
CAPN11-203ENST00000526118 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.2
CAPN11-203ENST00000526118 NSD3Q9BZ95 1437 aa16.27■□□□□ 0.19
CAPN11-203ENST00000526118 COL13A1Q5TAT6 717 aaPredicted RBP16.26■□□□□ 0.19
CAPN11-203ENST00000526118 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
CAPN11-203ENST00000526118 CICQ96RK0 1608 aaPredicted RBP16.26■□□□□ 0.19
CAPN11-203ENST00000526118 CGNL1Q0VF96 1302 aa16.25■□□□□ 0.19
CAPN11-203ENST00000526118 MAP3K19Q56UN5 1328 aa16.25■□□□□ 0.19
CAPN11-203ENST00000526118 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
CAPN11-203ENST00000526118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.25■□□□□ 0.19
CAPN11-203ENST00000526118 MPRIPQ6WCQ1 1025 aa16.25■□□□□ 0.19
CAPN11-203ENST00000526118 COG3Q96JB2 828 aa16.25■□□□□ 0.19
CAPN11-203ENST00000526118 A0A1W2PP64 1363 aa16.25■□□□□ 0.19
CAPN11-203ENST00000526118 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
CAPN11-203ENST00000526118 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
CAPN11-203ENST00000526118 TOGARAM1Q9Y4F4 1720 aa16.23■□□□□ 0.19
CAPN11-203ENST00000526118 TATP17735 454 aaPredicted RBP16.23■□□□□ 0.19
CAPN11-203ENST00000526118 TNS4Q8IZW8 715 aa16.23■□□□□ 0.19
CAPN11-203ENST00000526118 KLRG1Q96E93 195 aa16.23■□□□□ 0.19
CAPN11-203ENST00000526118 NMRK2Q9NPI5 230 aa16.23■□□□□ 0.19
CAPN11-203ENST00000526118 PCDH11XQ9BZA7 1347 aa16.22■□□□□ 0.19
CAPN11-203ENST00000526118 PCDH11YQ9BZA8 1340 aa16.22■□□□□ 0.19
CAPN11-203ENST00000526118 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
CAPN11-203ENST00000526118 BCS1LQ9Y276 419 aa16.22■□□□□ 0.19
CAPN11-203ENST00000526118 SMG6Q86US8 1419 aaKnown RBP16.21■□□□□ 0.19
CAPN11-203ENST00000526118 SSFA2P28290 1259 aa16.21■□□□□ 0.19
CAPN11-203ENST00000526118 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
CAPN11-203ENST00000526118 ARHGAP27Q6ZUM4 889 aa16.21■□□□□ 0.19
CAPN11-203ENST00000526118 SMIM5Q71RC9 77 aa16.21■□□□□ 0.19
CAPN11-203ENST00000526118 AMIGO3Q86WK7 504 aa16.21■□□□□ 0.19
CAPN11-203ENST00000526118 RBM46Q8TBY0 533 aaKnown RBP16.21■□□□□ 0.19
CAPN11-203ENST00000526118 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
CAPN11-203ENST00000526118 ITGB4P16144 1822 aa16.21■□□□□ 0.19
CAPN11-203ENST00000526118 FBLN1P23142 703 aa16.2■□□□□ 0.18
CAPN11-203ENST00000526118 HTRA3P83110 453 aa16.2■□□□□ 0.18
CAPN11-203ENST00000526118 N4BP2Q86UW6 1770 aaPredicted RBP16.2■□□□□ 0.18
CAPN11-203ENST00000526118 RTL1A6NKG5 1358 aa16.19■□□□□ 0.18
CAPN11-203ENST00000526118 PRELPP51888 382 aa16.19■□□□□ 0.18
CAPN11-203ENST00000526118 JMYQ8N9B5 988 aa16.19■□□□□ 0.18
CAPN11-203ENST00000526118 PXDNLA1KZ92 1463 aa16.18■□□□□ 0.18
CAPN11-203ENST00000526118 MMP10P09238 476 aa16.18■□□□□ 0.18
CAPN11-203ENST00000526118 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
CAPN11-203ENST00000526118 GNPATO15228 680 aa16.17■□□□□ 0.18
CAPN11-203ENST00000526118 TGFB2P61812 414 aa16.17■□□□□ 0.18
CAPN11-203ENST00000526118 FSTL1Q12841 308 aa16.17■□□□□ 0.18
CAPN11-203ENST00000526118 RRS1Q15050 365 aaKnown RBP16.17■□□□□ 0.18
CAPN11-203ENST00000526118 A0A0G2JLW4 131 aa16.16■□□□□ 0.18
CAPN11-203ENST00000526118 FCHSD2O94868 740 aa16.16■□□□□ 0.18
CAPN11-203ENST00000526118 CARD11Q9BXL7 1154 aa16.16■□□□□ 0.18
CAPN11-203ENST00000526118 PLEKHG2Q9H7P9 1386 aa16.15■□□□□ 0.18
CAPN11-203ENST00000526118 LOC102724428A0A0B4J2F2 783 aa16.15■□□□□ 0.18
CAPN11-203ENST00000526118 SIK1P57059 783 aa16.15■□□□□ 0.18
CAPN11-203ENST00000526118 NEUROD1Q13562 356 aa16.15■□□□□ 0.18
CAPN11-203ENST00000526118 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
CAPN11-203ENST00000526118 KIAA1551Q9HCM1 1747 aa16.15■□□□□ 0.18
CAPN11-203ENST00000526118 CYP27B1O15528 508 aa16.14■□□□□ 0.17
CAPN11-203ENST00000526118 C9orf131Q5VYM1 1079 aa16.14■□□□□ 0.17
CAPN11-203ENST00000526118 PIGBQ92521 554 aa16.14■□□□□ 0.17
CAPN11-203ENST00000526118 SIN3AQ96ST3 1273 aa16.14■□□□□ 0.17
CAPN11-203ENST00000526118 KDM2BQ8NHM5 1336 aa16.14■□□□□ 0.17
CAPN11-203ENST00000526118 MAP2P11137 1827 aaKnown RBP16.13■□□□□ 0.17
CAPN11-203ENST00000526118 PUS7Q96PZ0 661 aaKnown RBP16.13■□□□□ 0.17
CAPN11-203ENST00000526118 CCDC87Q9NVE4 849 aa16.13■□□□□ 0.17
CAPN11-203ENST00000526118 DPEP1P16444 411 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms