RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 PLSCR1O15162 318 aa23.32■■□□□ 1.32
CCS-203ENST00000526058 RGPD3A6NKT7 1758 aaPredicted RBP23.32■■□□□ 1.32
CCS-203ENST00000526058 RGPD4Q7Z3J3 1758 aa23.32■■□□□ 1.32
CCS-203ENST00000526058 R3HDM1Q15032 1099 aaKnown RBP23.31■■□□□ 1.32
CCS-203ENST00000526058 ZCRB1Q8TBF4 217 aaKnown RBP23.31■■□□□ 1.32
CCS-203ENST00000526058 MORC1Q86VD1 984 aa23.3■■□□□ 1.32
CCS-203ENST00000526058 RAPGEF4Q8WZA2 1011 aa23.29■■□□□ 1.32
CCS-203ENST00000526058 AMER1Q5JTC6 1135 aaPredicted RBP23.28■■□□□ 1.32
CCS-203ENST00000526058 PROM2Q8N271 834 aa23.28■■□□□ 1.32
CCS-203ENST00000526058 TATP17735 454 aaPredicted RBP23.27■■□□□ 1.32
CCS-203ENST00000526058 BTAF1O14981 1849 aa23.26■■□□□ 1.31
CCS-203ENST00000526058 PER1O15534 1290 aaPredicted RBP23.26■■□□□ 1.31
CCS-203ENST00000526058 EYA1Q99502 592 aa23.26■■□□□ 1.31
CCS-203ENST00000526058 EIF4A2Q14240 407 aaKnown RBP23.25■■□□□ 1.31
CCS-203ENST00000526058 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
CCS-203ENST00000526058 NBPF14Q5TI25 921 aa23.24■■□□□ 1.31
CCS-203ENST00000526058 DOT1LQ8TEK3 1739 aa23.23■■□□□ 1.31
CCS-203ENST00000526058 TXNRD1Q16881 649 aa23.23■■□□□ 1.31
CCS-203ENST00000526058 PRIM1P49642 420 aaKnown RBP23.21■■□□□ 1.31
CCS-203ENST00000526058 CC2D1BQ5T0F9 858 aaKnown RBP23.2■■□□□ 1.3
CCS-203ENST00000526058 SYTL4Q96C24 671 aaPredicted RBP23.2■■□□□ 1.3
CCS-203ENST00000526058 PKD1L3Q7Z443 1732 aa23.19■■□□□ 1.3
CCS-203ENST00000526058 ANO8Q9HCE9 1232 aaPredicted RBP23.19■■□□□ 1.3
CCS-203ENST00000526058 PCDH11XQ9BZA7 1347 aa23.18■■□□□ 1.3
CCS-203ENST00000526058 PCDH11YQ9BZA8 1340 aa23.18■■□□□ 1.3
CCS-203ENST00000526058 CYP27B1O15528 508 aa23.18■■□□□ 1.3
CCS-203ENST00000526058 LRP5O75197 1615 aa23.16■■□□□ 1.3
CCS-203ENST00000526058 CNGB1Q14028 1251 aaPredicted RBP23.16■■□□□ 1.3
CCS-203ENST00000526058 IGSF1Q8N6C5 1336 aa23.15■■□□□ 1.3
CCS-203ENST00000526058 SPG7Q9UQ90 795 aa23.13■■□□□ 1.29
CCS-203ENST00000526058 MTHFSP49914 203 aa23.12■■□□□ 1.29
CCS-203ENST00000526058 LRRC4BQ9NT99 713 aa23.12■■□□□ 1.29
CCS-203ENST00000526058 TOGARAM1Q9Y4F4 1720 aa23.12■■□□□ 1.29
CCS-203ENST00000526058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
CCS-203ENST00000526058 NPC1L1Q9UHC9 1359 aa23.11■■□□□ 1.29
CCS-203ENST00000526058 ITGB4P16144 1822 aa23.1■■□□□ 1.29
CCS-203ENST00000526058 IL13P35225 146 aa23.1■■□□□ 1.29
CCS-203ENST00000526058 STK32BQ9NY57 414 aa23.1■■□□□ 1.29
CCS-203ENST00000526058 LY75O60449 1722 aa23.1■■□□□ 1.29
CCS-203ENST00000526058 PAPPAQ13219 1627 aa23.09■■□□□ 1.29
CCS-203ENST00000526058 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
CCS-203ENST00000526058 SLC15A2Q16348 729 aa23.09■■□□□ 1.29
CCS-203ENST00000526058 AEBP1Q8IUX7 1158 aa23.09■■□□□ 1.29
CCS-203ENST00000526058 PDGFDQ9GZP0 370 aaPredicted RBP23.09■■□□□ 1.29
CCS-203ENST00000526058 KCNQ4P56696 695 aa23.08■■□□□ 1.29
CCS-203ENST00000526058 MPRIPQ6WCQ1 1025 aa23.08■■□□□ 1.29
CCS-203ENST00000526058 CASZ1Q86V15 1759 aa23.08■■□□□ 1.29
CCS-203ENST00000526058 PHKG2P15735 406 aa23.07■■□□□ 1.28
CCS-203ENST00000526058 IFNL2Q8IZJ0 200 aa23.06■■□□□ 1.28
CCS-203ENST00000526058 ZNF827Q17R98 1081 aa23.05■■□□□ 1.28
CCS-203ENST00000526058 SLC27A3Q5K4L6 730 aa23.05■■□□□ 1.28
CCS-203ENST00000526058 SULT6B1Q6IMI4 303 aa23.05■■□□□ 1.28
CCS-203ENST00000526058 PLEKHG2Q9H7P9 1386 aa23.04■■□□□ 1.28
CCS-203ENST00000526058 PLEKHO1Q53GL0 409 aaPredicted RBP23.03■■□□□ 1.28
CCS-203ENST00000526058 KDRP35968 1356 aa23.02■■□□□ 1.28
CCS-203ENST00000526058 PIGBQ92521 554 aa23.02■■□□□ 1.28
CCS-203ENST00000526058 CCNL1Q9UK58 526 aaPredicted RBP23.02■■□□□ 1.28
CCS-203ENST00000526058 AKT1S1Q96B36 256 aa23.01■■□□□ 1.27
CCS-203ENST00000526058 SPON1Q9HCB6 807 aa23.01■■□□□ 1.27
CCS-203ENST00000526058 DIAPH1O60610 1272 aaKnown RBP23■■□□□ 1.27
CCS-203ENST00000526058 ZBTB7AO95365 584 aa23■■□□□ 1.27
CCS-203ENST00000526058 AMOTQ4VCS5 1084 aa23■■□□□ 1.27
CCS-203ENST00000526058 PALLDQ8WX93 1383 aa23■■□□□ 1.27
CCS-203ENST00000526058 HMOX1P09601 288 aa22.99■■□□□ 1.27
CCS-203ENST00000526058 ZNF530Q6P9A1 599 aaPredicted RBP22.99■■□□□ 1.27
CCS-203ENST00000526058 COL3A1P02461 1466 aaPredicted RBP22.98■■□□□ 1.27
CCS-203ENST00000526058 TUBGCP6Q96RT7 1819 aa22.97■■□□□ 1.27
CCS-203ENST00000526058 TMOD3Q9NYL9 352 aa22.97■■□□□ 1.27
CCS-203ENST00000526058 ATF5Q9Y2D1 282 aaPredicted RBP22.96■■□□□ 1.27
CCS-203ENST00000526058 C5P01031 1676 aa22.95■■□□□ 1.26
CCS-203ENST00000526058 QSER1Q2KHR3 1735 aa22.95■■□□□ 1.26
CCS-203ENST00000526058 TAF1LQ8IZX4 1826 aa22.95■■□□□ 1.26
CCS-203ENST00000526058 SMARCC1Q92922 1105 aaPredicted RBP22.95■■□□□ 1.26
CCS-203ENST00000526058 DCAF5Q96JK2 942 aa22.95■■□□□ 1.26
CCS-203ENST00000526058 KDM6AO15550 1401 aaPredicted RBP22.94■■□□□ 1.26
CCS-203ENST00000526058 HSP90AB1P08238 724 aaKnown RBP22.94■■□□□ 1.26
CCS-203ENST00000526058 ASAP1Q9ULH1 1129 aa22.94■■□□□ 1.26
CCS-203ENST00000526058 PPP2R1AP30153 589 aa22.93■■□□□ 1.26
CCS-203ENST00000526058 C1orf141Q5JVX7 400 aa22.93■■□□□ 1.26
CCS-203ENST00000526058 TFCP2L1Q9NZI6 479 aa22.93■■□□□ 1.26
CCS-203ENST00000526058 PNPLA7Q6ZV29 1317 aa22.92■■□□□ 1.26
CCS-203ENST00000526058 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
CCS-203ENST00000526058 U2SURPO15042 1029 aaKnown RBP22.92■■□□□ 1.26
CCS-203ENST00000526058 PTGER2P43116 358 aa22.92■■□□□ 1.26
CCS-203ENST00000526058 PPP1R1BQ9UD71 204 aaPredicted RBP22.92■■□□□ 1.26
CCS-203ENST00000526058 MTFR1LQ9H019 292 aa22.91■■□□□ 1.26
CCS-203ENST00000526058 ATG3Q9NT62 314 aa22.91■■□□□ 1.26
CCS-203ENST00000526058 SCN11AQ9UI33 1791 aa22.89■■□□□ 1.26
CCS-203ENST00000526058 CABP4P57796 275 aa22.89■■□□□ 1.25
CCS-203ENST00000526058 LOC102724428A0A0B4J2F2 783 aa22.88■■□□□ 1.25
CCS-203ENST00000526058 SIK1P57059 783 aa22.88■■□□□ 1.25
CCS-203ENST00000526058 MTHFSDQ2M296 383 aaKnown RBP22.88■■□□□ 1.25
CCS-203ENST00000526058 CFAP53Q96M91 514 aa22.88■■□□□ 1.25
CCS-203ENST00000526058 VIRMAQ69YN4 1812 aaKnown RBP22.87■■□□□ 1.25
CCS-203ENST00000526058 AKAP4Q5JQC9 854 aa22.87■■□□□ 1.25
CCS-203ENST00000526058 SGIP1Q9BQI5 828 aa22.87■■□□□ 1.25
CCS-203ENST00000526058 C4BP0C0L5 1744 aa22.87■■□□□ 1.25
CCS-203ENST00000526058 NFATC2IPQ8NCF5 419 aa22.86■■□□□ 1.25
CCS-203ENST00000526058 ATP6V1AP38606 617 aa22.85■■□□□ 1.25
CCS-203ENST00000526058 ITPK1Q13572 414 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms