RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 MCM2P49736 904 aa9.82□□□□□ -0.84
BDNF-213ENST00000525950 MCTP1Q6DN14 999 aa9.82□□□□□ -0.84
BDNF-213ENST00000525950 KLHL34Q8N239 644 aa9.82□□□□□ -0.84
BDNF-213ENST00000525950 RICTORQ6R327 1708 aa9.82□□□□□ -0.84
BDNF-213ENST00000525950 NRKQ7Z2Y5 1582 aa9.81□□□□□ -0.84
BDNF-213ENST00000525950 CSPP1Q1MSJ5 1256 aa9.81□□□□□ -0.84
BDNF-213ENST00000525950 CEP85Q6P2H3 762 aa9.81□□□□□ -0.84
BDNF-213ENST00000525950 LRSAM1Q6UWE0 723 aa9.81□□□□□ -0.84
BDNF-213ENST00000525950 MBD3O95983 291 aa9.81□□□□□ -0.84
BDNF-213ENST00000525950 SETD1AO15047 1707 aaKnown RBP9.81□□□□□ -0.84
BDNF-213ENST00000525950 SDSP20132 328 aa9.81□□□□□ -0.84
BDNF-213ENST00000525950 RBSNQ9H1K0 784 aa9.81□□□□□ -0.84
BDNF-213ENST00000525950 RTL1A6NKG5 1358 aa9.8□□□□□ -0.84
BDNF-213ENST00000525950 EPB41L2O43491 1005 aaKnown RBP9.8□□□□□ -0.84
BDNF-213ENST00000525950 CAVIN1Q6NZI2 390 aaKnown RBP9.8□□□□□ -0.84
BDNF-213ENST00000525950 MON2Q7Z3U7 1717 aa9.8□□□□□ -0.84
BDNF-213ENST00000525950 THUMPD2Q9BTF0 503 aaKnown RBP9.8□□□□□ -0.84
BDNF-213ENST00000525950 ZDHHC9Q9Y397 364 aa9.8□□□□□ -0.84
BDNF-213ENST00000525950 ERC2O15083 957 aa9.8□□□□□ -0.84
BDNF-213ENST00000525950 HMOX1P09601 288 aa9.8□□□□□ -0.84
BDNF-213ENST00000525950 SIRT1Q96EB6 747 aa9.8□□□□□ -0.84
BDNF-213ENST00000525950 ZKSCAN5Q9Y2L8 839 aa9.8□□□□□ -0.84
BDNF-213ENST00000525950 RIMBP3CA6NJZ7 1639 aa9.79□□□□□ -0.84
BDNF-213ENST00000525950 RIMBP3BA6NNM3 1639 aa9.79□□□□□ -0.84
BDNF-213ENST00000525950 RIMBP3Q9UFD9 1639 aa9.79□□□□□ -0.84
BDNF-213ENST00000525950 CHL1O00533 1208 aa9.79□□□□□ -0.84
BDNF-213ENST00000525950 CUL4AQ13619 759 aa9.79□□□□□ -0.84
BDNF-213ENST00000525950 GPT2Q8TD30 523 aa9.79□□□□□ -0.84
BDNF-213ENST00000525950 INTS4Q96HW7 963 aaKnown RBP9.79□□□□□ -0.84
BDNF-213ENST00000525950 MTERF4Q7Z6M4 381 aaKnown RBP9.79□□□□□ -0.84
BDNF-213ENST00000525950 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.79□□□□□ -0.84
BDNF-213ENST00000525950 PPP6R1Q9UPN7 881 aa9.79□□□□□ -0.84
BDNF-213ENST00000525950 PRIM1P49642 420 aaKnown RBP9.79□□□□□ -0.84
BDNF-213ENST00000525950 ANAPC15P60006 121 aa9.79□□□□□ -0.84
BDNF-213ENST00000525950 AK9Q5TCS8 1911 aa9.78□□□□□ -0.84
BDNF-213ENST00000525950 HMMRO75330 724 aa9.78□□□□□ -0.84
BDNF-213ENST00000525950 CCDC39Q9UFE4 941 aa9.78□□□□□ -0.84
BDNF-213ENST00000525950 EMILIN1Q9Y6C2 1016 aa9.78□□□□□ -0.84
BDNF-213ENST00000525950 C16orf71Q8IYS4 520 aaPredicted RBP9.78□□□□□ -0.84
BDNF-213ENST00000525950 VSIG10Q8N0Z9 540 aa9.78□□□□□ -0.84
BDNF-213ENST00000525950 ZMYND15Q9H091 742 aa9.78□□□□□ -0.84
BDNF-213ENST00000525950 BRD1O95696 1058 aa9.78□□□□□ -0.84
BDNF-213ENST00000525950 PKNOX2Q96KN3 472 aa9.78□□□□□ -0.84
BDNF-213ENST00000525950 SSH2Q76I76 1423 aa9.78□□□□□ -0.84
BDNF-213ENST00000525950 C3P01024 1663 aa9.78□□□□□ -0.84
BDNF-213ENST00000525950 AKAP12Q02952 1782 aa9.77□□□□□ -0.84
BDNF-213ENST00000525950 ELL2O00472 640 aaPredicted RBP9.77□□□□□ -0.84
BDNF-213ENST00000525950 PRPF40AO75400 957 aaKnown RBP9.77□□□□□ -0.84
BDNF-213ENST00000525950 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.84
BDNF-213ENST00000525950 PKP1Q13835 747 aa9.77□□□□□ -0.85
BDNF-213ENST00000525950 TUBGCP6Q96RT7 1819 aa9.77□□□□□ -0.85
BDNF-213ENST00000525950 ARHGEF10O15013 1369 aa9.76□□□□□ -0.85
BDNF-213ENST00000525950 WASLO00401 505 aaPredicted RBP9.76□□□□□ -0.85
BDNF-213ENST00000525950 ZGPATQ8N5A5 531 aaKnown RBP9.76□□□□□ -0.85
BDNF-213ENST00000525950 COG3Q96JB2 828 aa9.76□□□□□ -0.85
BDNF-213ENST00000525950 TMEM63CQ9P1W3 806 aa9.76□□□□□ -0.85
BDNF-213ENST00000525950 SALL3Q9BXA9 1300 aa9.76□□□□□ -0.85
BDNF-213ENST00000525950 DYNC1I1O14576 645 aa9.76□□□□□ -0.85
BDNF-213ENST00000525950 NCLP19338 710 aaKnown RBP9.76□□□□□ -0.85
BDNF-213ENST00000525950 MSH6P52701 1360 aa9.75□□□□□ -0.85
BDNF-213ENST00000525950 A2ML1A8K2U0 1454 aa9.75□□□□□ -0.85
BDNF-213ENST00000525950 RAPGEF3O95398 923 aa9.75□□□□□ -0.85
BDNF-213ENST00000525950 PDE1AP54750 535 aa9.75□□□□□ -0.85
BDNF-213ENST00000525950 OTUD7AQ8TE49 926 aaPredicted RBP9.75□□□□□ -0.85
BDNF-213ENST00000525950 SYAP1Q96A49 352 aaPredicted RBP9.75□□□□□ -0.85
BDNF-213ENST00000525950 TECPR2O15040 1411 aa9.75□□□□□ -0.85
BDNF-213ENST00000525950 CCT4P50991 539 aaKnown RBP9.75□□□□□ -0.85
BDNF-213ENST00000525950 UVSSAQ2YD98 709 aa9.75□□□□□ -0.85
BDNF-213ENST00000525950 TMX3Q96JJ7 454 aa9.75□□□□□ -0.85
BDNF-213ENST00000525950 MCCP23508 829 aa9.75□□□□□ -0.85
BDNF-213ENST00000525950 CPS1P31327 1500 aa9.75□□□□□ -0.85
BDNF-213ENST00000525950 RGPD1P0DJD0 1748 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 SPATA31D1Q6ZQQ2 1576 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 FBLN1P23142 703 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 NME9Q86XW9 330 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 CRB1P82279 1406 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 PHF14O94880 888 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 FAM184AQ8NB25 1140 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 AOX1Q06278 1338 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 AGLP35573 1532 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 FAM83GA6ND36 823 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 ESYT1Q9BSJ8 1104 aa9.74□□□□□ -0.85
BDNF-213ENST00000525950 PLEKHG5O94827 1062 aa9.73□□□□□ -0.85
BDNF-213ENST00000525950 SASS6Q6UVJ0 657 aa9.73□□□□□ -0.85
BDNF-213ENST00000525950 TMEM87AQ8NBN3 555 aa9.73□□□□□ -0.85
BDNF-213ENST00000525950 MEIS3Q99687 375 aa9.73□□□□□ -0.85
BDNF-213ENST00000525950 STAP2Q9UGK3 403 aa9.73□□□□□ -0.85
BDNF-213ENST00000525950 CCDC61Q9Y6R9 512 aa9.73□□□□□ -0.85
BDNF-213ENST00000525950 ITSN1Q15811 1721 aa9.73□□□□□ -0.85
BDNF-213ENST00000525950 SRCIN1Q9C0H9 1055 aa9.73□□□□□ -0.85
BDNF-213ENST00000525950 RBM27Q9P2N5 1060 aaKnown RBP9.73□□□□□ -0.85
BDNF-213ENST00000525950 R3HCC1Q9Y3T6 440 aaKnown RBP9.73□□□□□ -0.85
BDNF-213ENST00000525950 WAPLQ7Z5K2 1190 aa9.73□□□□□ -0.85
BDNF-213ENST00000525950 TSPY26PQ9H489 355 aa9.73□□□□□ -0.85
BDNF-213ENST00000525950 SOS1Q07889 1333 aaPredicted RBP9.73□□□□□ -0.85
BDNF-213ENST00000525950 NRXN3Q9Y4C0 1643 aa9.72□□□□□ -0.85
BDNF-213ENST00000525950 SYCE3A1L190 88 aa9.72□□□□□ -0.85
BDNF-213ENST00000525950 SMARCA5O60264 1052 aaPredicted RBP9.72□□□□□ -0.85
BDNF-213ENST00000525950 NEK4P51957 841 aa9.72□□□□□ -0.85
BDNF-213ENST00000525950 NUDT16Q96DE0 195 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms