RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 ANKRD36BQ8N2N9 1353 aa15□□□□□ -0.01
VPS26B-203ENST00000525918 ZCRB1Q8TBF4 217 aaKnown RBP15□□□□□ -0.01
VPS26B-203ENST00000525918 AKT1S1Q96B36 256 aa15□□□□□ -0.01
VPS26B-203ENST00000525918 SYTL4Q96C24 671 aaPredicted RBP15□□□□□ -0.01
VPS26B-203ENST00000525918 COL24A1Q17RW2 1714 aa15□□□□□ -0.01
VPS26B-203ENST00000525918 MAP3K5Q99683 1374 aa14.99□□□□□ -0.01
VPS26B-203ENST00000525918 TUBGCP6Q96RT7 1819 aa14.99□□□□□ -0.01
VPS26B-203ENST00000525918 PRIM1P49642 420 aaKnown RBP14.99□□□□□ -0.01
VPS26B-203ENST00000525918 RTL1A6NKG5 1358 aa14.98□□□□□ -0.01
VPS26B-203ENST00000525918 KIF20BQ96Q89 1820 aa14.97□□□□□ -0.01
VPS26B-203ENST00000525918 FYB1O15117 783 aa14.97□□□□□ -0.01
VPS26B-203ENST00000525918 TMF1P82094 1093 aa14.97□□□□□ -0.01
VPS26B-203ENST00000525918 TFCP2L1Q9NZI6 479 aa14.97□□□□□ -0.01
VPS26B-203ENST00000525918 MEGF6O75095 1541 aa14.97□□□□□ -0.01
VPS26B-203ENST00000525918 CGNL1Q0VF96 1302 aa14.96□□□□□ -0.01
VPS26B-203ENST00000525918 PNPLA7Q6ZV29 1317 aa14.96□□□□□ -0.01
VPS26B-203ENST00000525918 POLD1P28340 1107 aa14.96□□□□□ -0.01
VPS26B-203ENST00000525918 RRS1Q15050 365 aaKnown RBP14.96□□□□□ -0.01
VPS26B-203ENST00000525918 ZNF784Q8NCA9 323 aaPredicted RBP14.96□□□□□ -0.01
VPS26B-203ENST00000525918 GGNBP2Q9H3C7 697 aa14.96□□□□□ -0.01
VPS26B-203ENST00000525918 SMG6Q86US8 1419 aaKnown RBP14.95□□□□□ -0.02
VPS26B-203ENST00000525918 KCNQ4P56696 695 aa14.95□□□□□ -0.02
VPS26B-203ENST00000525918 NBPF6Q5VWK0 638 aa14.95□□□□□ -0.02
VPS26B-203ENST00000525918 NBPF4Q96M43 638 aa14.95□□□□□ -0.02
VPS26B-203ENST00000525918 NSD2O96028 1365 aa14.95□□□□□ -0.02
VPS26B-203ENST00000525918 RAPGEF4Q8WZA2 1011 aa14.94□□□□□ -0.02
VPS26B-203ENST00000525918 USP47Q96K76 1375 aa14.94□□□□□ -0.02
VPS26B-203ENST00000525918 GPR162Q16538 588 aa14.93□□□□□ -0.02
VPS26B-203ENST00000525918 CDCA8Q53HL2 280 aa14.93□□□□□ -0.02
VPS26B-203ENST00000525918 CCNL1Q9UK58 526 aaPredicted RBP14.93□□□□□ -0.02
VPS26B-203ENST00000525918 TATP17735 454 aaPredicted RBP14.92□□□□□ -0.02
VPS26B-203ENST00000525918 USHBP1Q8N6Y0 703 aa14.92□□□□□ -0.02
VPS26B-203ENST00000525918 INSRP06213 1382 aa14.92□□□□□ -0.02
VPS26B-203ENST00000525918 KIF24Q5T7B8 1368 aa14.92□□□□□ -0.02
VPS26B-203ENST00000525918 HMGB2P26583 209 aaKnown RBP14.91□□□□□ -0.02
VPS26B-203ENST00000525918 HSP90AB2PQ58FF8 381 aa14.91□□□□□ -0.02
VPS26B-203ENST00000525918 KLHL34Q8N239 644 aa14.91□□□□□ -0.02
VPS26B-203ENST00000525918 TAF1LQ8IZX4 1826 aa14.91□□□□□ -0.02
VPS26B-203ENST00000525918 C5P01031 1676 aa14.9□□□□□ -0.02
VPS26B-203ENST00000525918 ITGB4P16144 1822 aa14.9□□□□□ -0.02
VPS26B-203ENST00000525918 FLT4P35916 1363 aa14.9□□□□□ -0.02
VPS26B-203ENST00000525918 PCDH11XQ9BZA7 1347 aa14.9□□□□□ -0.02
VPS26B-203ENST00000525918 PCDH11YQ9BZA8 1340 aa14.9□□□□□ -0.02
VPS26B-203ENST00000525918 MAP2P11137 1827 aaKnown RBP14.88□□□□□ -0.03
VPS26B-203ENST00000525918 COL23A1Q86Y22 540 aaPredicted RBP14.88□□□□□ -0.03
VPS26B-203ENST00000525918 GOLGB1Q14789 3259 aaKnown RBP14.87□□□□□ -0.03
VPS26B-203ENST00000525918 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
VPS26B-203ENST00000525918 PKD1L3Q7Z443 1732 aa14.86□□□□□ -0.03
VPS26B-203ENST00000525918 MPRIPQ6WCQ1 1025 aa14.86□□□□□ -0.03
VPS26B-203ENST00000525918 PELP1Q8IZL8 1130 aaKnown RBP14.86□□□□□ -0.03
VPS26B-203ENST00000525918 CARD14Q9BXL6 1004 aa14.86□□□□□ -0.03
VPS26B-203ENST00000525918 ANKRD26Q9UPS8 1709 aa14.86□□□□□ -0.03
VPS26B-203ENST00000525918 CYP27B1O15528 508 aa14.85□□□□□ -0.03
VPS26B-203ENST00000525918 FLAD1Q8NFF5 587 aa14.85□□□□□ -0.03
VPS26B-203ENST00000525918 NLGN2Q8NFZ4 835 aa14.85□□□□□ -0.03
VPS26B-203ENST00000525918 EMILIN1Q9Y6C2 1016 aa14.85□□□□□ -0.03
VPS26B-203ENST00000525918 TOGARAM1Q9Y4F4 1720 aa14.85□□□□□ -0.03
VPS26B-203ENST00000525918 PALLDQ8WX93 1383 aa14.85□□□□□ -0.03
VPS26B-203ENST00000525918 C1QTNF8P60827 252 aa14.84□□□□□ -0.03
VPS26B-203ENST00000525918 SMARCC1Q92922 1105 aaPredicted RBP14.84□□□□□ -0.03
VPS26B-203ENST00000525918 NSD3Q9BZ95 1437 aa14.83□□□□□ -0.03
VPS26B-203ENST00000525918 C4BP0C0L5 1744 aa14.83□□□□□ -0.03
VPS26B-203ENST00000525918 TIMELESSQ9UNS1 1208 aa14.83□□□□□ -0.04
VPS26B-203ENST00000525918 PPM1GO15355 546 aaPredicted RBP14.82□□□□□ -0.04
VPS26B-203ENST00000525918 GRIN3BO60391 1043 aa14.82□□□□□ -0.04
VPS26B-203ENST00000525918 MSL1Q68DK7 614 aa14.82□□□□□ -0.04
VPS26B-203ENST00000525918 SPG7Q9UQ90 795 aa14.82□□□□□ -0.04
VPS26B-203ENST00000525918 WASHC2AQ641Q2 1341 aa14.82□□□□□ -0.04
VPS26B-203ENST00000525918 UBR3Q6ZT12 1888 aa14.82□□□□□ -0.04
VPS26B-203ENST00000525918 NCAPD2Q15021 1401 aa14.82□□□□□ -0.04
VPS26B-203ENST00000525918 NKX1-1Q15270 411 aaPredicted RBP14.81□□□□□ -0.04
VPS26B-203ENST00000525918 YBX3P16989 372 aaKnown RBP eCLIP14.8□□□□□ -0.044e-6■□□□□ 8.3
VPS26B-203ENST00000525918 PIGBQ92521 554 aa14.8□□□□□ -0.04
VPS26B-203ENST00000525918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.8□□□□□ -0.04
VPS26B-203ENST00000525918 CD2APQ9Y5K6 639 aa14.8□□□□□ -0.04
VPS26B-203ENST00000525918 SENP3-EIF4A1A0A087X0R7 540 aa14.79□□□□□ -0.04
VPS26B-203ENST00000525918 AK7Q96M32 723 aa14.79□□□□□ -0.04
VPS26B-203ENST00000525918 GIGYF1O75420 1035 aaPredicted RBP14.78□□□□□ -0.04
VPS26B-203ENST00000525918 EYA1Q99502 592 aa14.78□□□□□ -0.04
VPS26B-203ENST00000525918 POLKQ9UBT6 870 aa14.77□□□□□ -0.05
VPS26B-203ENST00000525918 LOC102724428A0A0B4J2F2 783 aa14.76□□□□□ -0.05
VPS26B-203ENST00000525918 SIK1P57059 783 aa14.76□□□□□ -0.05
VPS26B-203ENST00000525918 IFNL2Q8IZJ0 200 aa14.76□□□□□ -0.05
VPS26B-203ENST00000525918 TMOD3Q9NYL9 352 aa14.76□□□□□ -0.05
VPS26B-203ENST00000525918 CLSPNQ9HAW4 1339 aa14.75□□□□□ -0.05
VPS26B-203ENST00000525918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.75□□□□□ -0.05
VPS26B-203ENST00000525918 PHKG2P15735 406 aa14.75□□□□□ -0.05
VPS26B-203ENST00000525918 SSFA2P28290 1259 aa14.75□□□□□ -0.05
VPS26B-203ENST00000525918 AMIGO3Q86WK7 504 aa14.75□□□□□ -0.05
VPS26B-203ENST00000525918 PLEKHG2Q9H7P9 1386 aa14.74□□□□□ -0.05
VPS26B-203ENST00000525918 PHF14O94880 888 aa14.74□□□□□ -0.05
VPS26B-203ENST00000525918 LINC00116Q8NCU8 138 aa14.74□□□□□ -0.05
VPS26B-203ENST00000525918 ASAP1Q9ULH1 1129 aa14.74□□□□□ -0.05
VPS26B-203ENST00000525918 ATP6V1AP38606 617 aa14.73□□□□□ -0.05
VPS26B-203ENST00000525918 EIF4A2Q14240 407 aaKnown RBP14.73□□□□□ -0.05
VPS26B-203ENST00000525918 POLR3GLQ9BT43 218 aa14.73□□□□□ -0.05
VPS26B-203ENST00000525918 TNNT2P45379 298 aaPredicted RBP14.72□□□□□ -0.05
VPS26B-203ENST00000525918 SMIM5Q71RC9 77 aa14.72□□□□□ -0.05
VPS26B-203ENST00000525918 ZNF831Q5JPB2 1677 aa14.71□□□□□ -0.05
VPS26B-203ENST00000525918 ITPK1Q13572 414 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms