RNA–Protein interactions for RNA: ENST00000525835.5

SOX6-206, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-206ENST00000525835 RREB1Q92766 1687 aa31.17■■■□□ 2.58
SOX6-206ENST00000525835 EIF4A2Q14240 407 aaKnown RBP31.16■■■□□ 2.58
SOX6-206ENST00000525835 TATP17735 454 aaPredicted RBP31.15■■■□□ 2.58
SOX6-206ENST00000525835 EYA1Q99502 592 aa31.15■■■□□ 2.58
SOX6-206ENST00000525835 PLSCR1O15162 318 aa31.14■■■□□ 2.58
SOX6-206ENST00000525835 DDX54Q8TDD1 881 aaKnown RBP31.14■■■□□ 2.58
SOX6-206ENST00000525835 PTF1AQ7RTS3 328 aa31.13■■■□□ 2.57
SOX6-206ENST00000525835 CC2D1BQ5T0F9 858 aaKnown RBP31.12■■■□□ 2.57
SOX6-206ENST00000525835 PKD1L3Q7Z443 1732 aa31.11■■■□□ 2.57
SOX6-206ENST00000525835 NUP188Q5SRE5 1749 aa31.1■■■□□ 2.57
SOX6-206ENST00000525835 KCNQ2O43526 872 aa31.09■■■□□ 2.57
SOX6-206ENST00000525835 PLEKHG2Q9H7P9 1386 aa31.08■■■□□ 2.57
SOX6-206ENST00000525835 IGSF1Q8N6C5 1336 aa31.08■■■□□ 2.57
SOX6-206ENST00000525835 ACSBG1Q96GR2 724 aa31.07■■■□□ 2.56
SOX6-206ENST00000525835 PCDH11XQ9BZA7 1347 aa31.06■■■□□ 2.56
SOX6-206ENST00000525835 PCDH11YQ9BZA8 1340 aa31.06■■■□□ 2.56
SOX6-206ENST00000525835 DOT1LQ8TEK3 1739 aa31.05■■■□□ 2.56
SOX6-206ENST00000525835 BTAF1O14981 1849 aa31.05■■■□□ 2.56
SOX6-206ENST00000525835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.04■■■□□ 2.56
SOX6-206ENST00000525835 KAT6BQ8WYB5 2073 aa31.03■■■□□ 2.56
SOX6-206ENST00000525835 MTHFSP49914 203 aa31.03■■■□□ 2.56
SOX6-206ENST00000525835 IL13P35225 146 aa31■■■□□ 2.55
SOX6-206ENST00000525835 SPG7Q9UQ90 795 aa31■■■□□ 2.55
SOX6-206ENST00000525835 CYP27B1O15528 508 aa30.99■■■□□ 2.55
SOX6-206ENST00000525835 ZEB1P37275 1124 aaPredicted RBP30.98■■■□□ 2.55
SOX6-206ENST00000525835 PROM2Q8N271 834 aa30.98■■■□□ 2.55
SOX6-206ENST00000525835 KDRP35968 1356 aa30.96■■■□□ 2.55
SOX6-206ENST00000525835 PRIM1P49642 420 aaKnown RBP30.96■■■□□ 2.55
SOX6-206ENST00000525835 NBPF14Q5TI25 921 aa30.96■■■□□ 2.55
SOX6-206ENST00000525835 TXNRD1Q16881 649 aa30.95■■■□□ 2.55
SOX6-206ENST00000525835 PSDA5PKW4 1024 aaPredicted RBP30.94■■■□□ 2.54
SOX6-206ENST00000525835 NKX1-1Q15270 411 aaPredicted RBP30.94■■■□□ 2.54
SOX6-206ENST00000525835 CNGB1Q14028 1251 aaPredicted RBP30.93■■■□□ 2.54
SOX6-206ENST00000525835 R3HDM1Q15032 1099 aaKnown RBP30.93■■■□□ 2.54
SOX6-206ENST00000525835 SYTL4Q96C24 671 aaPredicted RBP30.93■■■□□ 2.54
SOX6-206ENST00000525835 COL3A1P02461 1466 aaPredicted RBP30.91■■■□□ 2.54
SOX6-206ENST00000525835 TOGARAM1Q9Y4F4 1720 aa30.91■■■□□ 2.54
SOX6-206ENST00000525835 DIAPH1O60610 1272 aaKnown RBP30.9■■■□□ 2.54
SOX6-206ENST00000525835 SULT6B1Q6IMI4 303 aa30.9■■■□□ 2.54
SOX6-206ENST00000525835 AEBP1Q8IUX7 1158 aa30.9■■■□□ 2.54
SOX6-206ENST00000525835 IFNL2Q8IZJ0 200 aa30.9■■■□□ 2.54
SOX6-206ENST00000525835 SRCAPQ6ZRS2 3230 aa30.89■■■□□ 2.54
SOX6-206ENST00000525835 PHKG2P15735 406 aa30.88■■■□□ 2.53
SOX6-206ENST00000525835 AMOTQ4VCS5 1084 aa30.88■■■□□ 2.53
SOX6-206ENST00000525835 LY75O60449 1722 aa30.87■■■□□ 2.53
SOX6-206ENST00000525835 ITGB4P16144 1822 aa30.87■■■□□ 2.53
SOX6-206ENST00000525835 PLEKHO1Q53GL0 409 aaPredicted RBP30.87■■■□□ 2.53
SOX6-206ENST00000525835 PAPPAQ13219 1627 aa30.84■■■□□ 2.53
SOX6-206ENST00000525835 SLC27A3Q5K4L6 730 aa30.84■■■□□ 2.53
SOX6-206ENST00000525835 ANO8Q9HCE9 1232 aaPredicted RBP30.84■■■□□ 2.53
SOX6-206ENST00000525835 PPP2R1AP30153 589 aa30.83■■■□□ 2.53
SOX6-206ENST00000525835 LRP5O75197 1615 aa30.83■■■□□ 2.53
SOX6-206ENST00000525835 HSP90AB1P08238 724 aaKnown RBP30.8■■■□□ 2.52
SOX6-206ENST00000525835 MPRIPQ6WCQ1 1025 aa30.8■■■□□ 2.52
SOX6-206ENST00000525835 CFAP53Q96M91 514 aa30.8■■■□□ 2.52
SOX6-206ENST00000525835 LRRC4BQ9NT99 713 aa30.8■■■□□ 2.52
SOX6-206ENST00000525835 ZNF530Q6P9A1 599 aaPredicted RBP30.78■■■□□ 2.52
SOX6-206ENST00000525835 STK32BQ9NY57 414 aa30.78■■■□□ 2.52
SOX6-206ENST00000525835 HMOX1P09601 288 aa30.77■■■□□ 2.52
SOX6-206ENST00000525835 SLC15A2Q16348 729 aa30.77■■■□□ 2.52
SOX6-206ENST00000525835 DCAF5Q96JK2 942 aa30.77■■■□□ 2.52
SOX6-206ENST00000525835 DDX10Q13206 875 aaKnown RBP30.75■■■□□ 2.51
SOX6-206ENST00000525835 PIGBQ92521 554 aa30.75■■■□□ 2.51
SOX6-206ENST00000525835 CASZ1Q86V15 1759 aa30.74■■■□□ 2.51
SOX6-206ENST00000525835 C1orf141Q5JVX7 400 aa30.74■■■□□ 2.51
SOX6-206ENST00000525835 TMOD3Q9NYL9 352 aa30.74■■■□□ 2.51
SOX6-206ENST00000525835 ERVV-2B6SEH9 535 aa30.73■■■□□ 2.51
SOX6-206ENST00000525835 SMARCC1Q92922 1105 aaPredicted RBP30.73■■■□□ 2.51
SOX6-206ENST00000525835 PALLDQ8WX93 1383 aa30.73■■■□□ 2.51
SOX6-206ENST00000525835 KDM6AO15550 1401 aaPredicted RBP30.73■■■□□ 2.51
SOX6-206ENST00000525835 U2SURPO15042 1029 aaKnown RBP30.72■■■□□ 2.51
SOX6-206ENST00000525835 CCNL1Q9UK58 526 aaPredicted RBP30.72■■■□□ 2.51
SOX6-206ENST00000525835 HMGB2P26583 209 aaKnown RBP30.69■■■□□ 2.5
SOX6-206ENST00000525835 AKAP4Q5JQC9 854 aa30.69■■■□□ 2.5
SOX6-206ENST00000525835 AKT1S1Q96B36 256 aa30.69■■■□□ 2.5
SOX6-206ENST00000525835 NUDCQ9Y266 331 aa30.69■■■□□ 2.5
SOX6-206ENST00000525835 QSER1Q2KHR3 1735 aa30.69■■■□□ 2.5
SOX6-206ENST00000525835 ZNF827Q17R98 1081 aa30.68■■■□□ 2.5
SOX6-206ENST00000525835 SCN11AQ9UI33 1791 aa30.68■■■□□ 2.5
SOX6-206ENST00000525835 C5P01031 1676 aa30.67■■■□□ 2.5
SOX6-206ENST00000525835 KCNQ4P56696 695 aa30.66■■■□□ 2.5
SOX6-206ENST00000525835 RALBP1Q15311 655 aa30.66■■■□□ 2.5
SOX6-206ENST00000525835 TAF1LQ8IZX4 1826 aa30.66■■■□□ 2.5
SOX6-206ENST00000525835 MTHFSDQ2M296 383 aaKnown RBP30.65■■■□□ 2.5
SOX6-206ENST00000525835 ADAMTS7Q9UKP4 1686 aa30.63■■■□□ 2.49
SOX6-206ENST00000525835 CABP4P57796 275 aa30.63■■■□□ 2.49
SOX6-206ENST00000525835 PDGFDQ9GZP0 370 aaPredicted RBP30.63■■■□□ 2.49
SOX6-206ENST00000525835 ASAP1Q9ULH1 1129 aa30.63■■■□□ 2.49
SOX6-206ENST00000525835 RSPH6AQ9H0K4 717 aa30.62■■■□□ 2.49
SOX6-206ENST00000525835 ATG3Q9NT62 314 aa30.62■■■□□ 2.49
SOX6-206ENST00000525835 VIRMAQ69YN4 1812 aaKnown RBP30.61■■■□□ 2.49
SOX6-206ENST00000525835 SPON1Q9HCB6 807 aa30.61■■■□□ 2.49
SOX6-206ENST00000525835 TUBGCP6Q96RT7 1819 aa30.61■■■□□ 2.49
SOX6-206ENST00000525835 ZNF831Q5JPB2 1677 aa30.59■■■□□ 2.49
SOX6-206ENST00000525835 MRC1P22897 1456 aa30.59■■■□□ 2.49
SOX6-206ENST00000525835 LOC102724428A0A0B4J2F2 783 aa30.59■■■□□ 2.49
SOX6-206ENST00000525835 U2AF1L5P0DN76 240 aaPredicted RBP30.59■■■□□ 2.49
SOX6-206ENST00000525835 SIK1P57059 783 aa30.59■■■□□ 2.49
SOX6-206ENST00000525835 U2AF1Q01081 240 aaKnown RBP eCLIP30.59■■■□□ 2.49
SOX6-206ENST00000525835 FCHSD2O94868 740 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms