RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
CTNND1-211ENST00000525821 ZFP42Q96MM3 310 aa11.7□□□□□ -0.54
CTNND1-211ENST00000525821 UPP2O95045 317 aa11.69□□□□□ -0.54
CTNND1-211ENST00000525821 TRIM47Q96LD4 638 aa11.69□□□□□ -0.54
CTNND1-211ENST00000525821 PURBQ96QR8 312 aaKnown RBP11.69□□□□□ -0.54
CTNND1-211ENST00000525821 LILRA1O75019 489 aa11.68□□□□□ -0.54
CTNND1-211ENST00000525821 LINC00528Q8N1L1 170 aa11.68□□□□□ -0.54
CTNND1-211ENST00000525821 TSEN34Q9BSV6 310 aaKnown RBP11.68□□□□□ -0.54
CTNND1-211ENST00000525821 SLFNL1Q499Z3 407 aa11.67□□□□□ -0.54
CTNND1-211ENST00000525821 CYLDQ9NQC7 956 aa11.67□□□□□ -0.54
CTNND1-211ENST00000525821 PCDHB11Q9Y5F2 797 aa11.67□□□□□ -0.54
CTNND1-211ENST00000525821 A6NJR5 290 aa11.66□□□□□ -0.54
CTNND1-211ENST00000525821 BMP2P12643 396 aa11.66□□□□□ -0.54
CTNND1-211ENST00000525821 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
CTNND1-211ENST00000525821 C6orf118Q5T5N4 469 aa11.66□□□□□ -0.54
CTNND1-211ENST00000525821 PROSER2Q86WR7 435 aaPredicted RBP11.66□□□□□ -0.54
CTNND1-211ENST00000525821 PHTF2Q8N3S3 785 aa11.66□□□□□ -0.54
CTNND1-211ENST00000525821 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
CTNND1-211ENST00000525821 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
CTNND1-211ENST00000525821 SNRPBP14678 240 aaKnown RBP11.65□□□□□ -0.54
CTNND1-211ENST00000525821 FNBP4Q8N3X1 1017 aaPredicted RBP11.65□□□□□ -0.54
CTNND1-211ENST00000525821 CCDC85AQ96PX6 553 aaPredicted RBP11.65□□□□□ -0.54
CTNND1-211ENST00000525821 ALG2Q9H553 416 aa11.65□□□□□ -0.54
CTNND1-211ENST00000525821 CC2D2BQ6DHV5 1058 aa11.64□□□□□ -0.55
CTNND1-211ENST00000525821 RNF135Q8IUD6 432 aa11.64□□□□□ -0.55
CTNND1-211ENST00000525821 AGBL1Q96MI9 1066 aa11.64□□□□□ -0.55
CTNND1-211ENST00000525821 POM121CA8CG34 1229 aa11.63□□□□□ -0.55
CTNND1-211ENST00000525821 ADH1AP07327 375 aa11.63□□□□□ -0.55
CTNND1-211ENST00000525821 ERVK-9P63128 1117 aa11.63□□□□□ -0.55
CTNND1-211ENST00000525821 RELBQ01201 579 aa11.61□□□□□ -0.55
CTNND1-211ENST00000525821 TSGA10IPQ3SY00 556 aa11.61□□□□□ -0.55
CTNND1-211ENST00000525821 CDCA7Q9BWT1 371 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-211ENST00000525821 CHIC2Q9UKJ5 165 aa11.61□□□□□ -0.55
CTNND1-211ENST00000525821 AQRO60306 1485 aaKnown RBP eCLIP11.61□□□□□ -0.556e-14■□□□□ 10.3
CTNND1-211ENST00000525821 SPINT1O43278 529 aa11.6□□□□□ -0.55
CTNND1-211ENST00000525821 SCTRP47872 440 aa11.6□□□□□ -0.55
CTNND1-211ENST00000525821 KDF1Q8NAX2 398 aaPredicted RBP11.6□□□□□ -0.55
CTNND1-211ENST00000525821 ESF1Q9H501 851 aaKnown RBP11.6□□□□□ -0.55
CTNND1-211ENST00000525821 DOLKQ9UPQ8 538 aa11.6□□□□□ -0.55
CTNND1-211ENST00000525821 PTGIRP43119 386 aa11.59□□□□□ -0.55
CTNND1-211ENST00000525821 HDGFL1Q5TGJ6 251 aa11.59□□□□□ -0.55
CTNND1-211ENST00000525821 ZNF395Q9H8N7 513 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-211ENST00000525821 ADAMTS19Q8TE59 1207 aa11.58□□□□□ -0.56
CTNND1-211ENST00000525821 SOS2Q07890 1332 aaPredicted RBP11.58□□□□□ -0.56
CTNND1-211ENST00000525821 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
CTNND1-211ENST00000525821 MYCP01106 439 aaPredicted RBP11.57□□□□□ -0.56
CTNND1-211ENST00000525821 MAP7D1Q3KQU3 841 aa11.57□□□□□ -0.56
CTNND1-211ENST00000525821 OSBPL3Q9H4L5 887 aa11.57□□□□□ -0.56
CTNND1-211ENST00000525821 TOPBP1Q92547 1522 aa11.56□□□□□ -0.56
CTNND1-211ENST00000525821 TTLL8A6PVC2 850 aa11.56□□□□□ -0.56
CTNND1-211ENST00000525821 EIF4G3O43432 1585 aaKnown RBP11.56□□□□□ -0.56
CTNND1-211ENST00000525821 USP4Q13107 963 aa11.56□□□□□ -0.56
CTNND1-211ENST00000525821 CYP2U1Q7Z449 544 aa11.56□□□□□ -0.56
CTNND1-211ENST00000525821 PLPP7Q8NBV4 271 aa11.56□□□□□ -0.56
CTNND1-211ENST00000525821 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
CTNND1-211ENST00000525821 INSM2Q96T92 566 aaPredicted RBP11.56□□□□□ -0.56
CTNND1-211ENST00000525821 PIK3CDO00329 1044 aa11.55□□□□□ -0.56
CTNND1-211ENST00000525821 TRAK2O60296 914 aa11.55□□□□□ -0.56
CTNND1-211ENST00000525821 MAN1A2O60476 641 aa11.55□□□□□ -0.56
CTNND1-211ENST00000525821 OXLD1Q5BKU9 147 aa11.55□□□□□ -0.56
CTNND1-211ENST00000525821 ZNF775Q96BV0 537 aaPredicted RBP11.54□□□□□ -0.56
CTNND1-211ENST00000525821 SIRT1Q96EB6 747 aa11.54□□□□□ -0.56
CTNND1-211ENST00000525821 SOBPA7XYQ1 873 aa11.53□□□□□ -0.56
CTNND1-211ENST00000525821 SKIP12755 728 aa11.53□□□□□ -0.56
CTNND1-211ENST00000525821 CTSOP43234 321 aaPredicted RBP11.53□□□□□ -0.56
CTNND1-211ENST00000525821 NFATC2IPQ8NCF5 419 aa11.53□□□□□ -0.56
CTNND1-211ENST00000525821 POLMQ9NP87 494 aaPredicted RBP11.53□□□□□ -0.56
CTNND1-211ENST00000525821 TOP2AP11388 1531 aaKnown RBP11.52□□□□□ -0.57
CTNND1-211ENST00000525821 FIGNL2A6NMB9 653 aa11.52□□□□□ -0.57
CTNND1-211ENST00000525821 GLMNQ92990 594 aa11.52□□□□□ -0.57
CTNND1-211ENST00000525821 DNMT3LQ9UJW3 386 aa11.52□□□□□ -0.57
CTNND1-211ENST00000525821 A0A1W2PRU2 124 aa11.51□□□□□ -0.57
CTNND1-211ENST00000525821 CHD1O14646 1710 aa11.5□□□□□ -0.57
CTNND1-211ENST00000525821 GNRH1P01148 92 aa11.5□□□□□ -0.57
CTNND1-211ENST00000525821 ZMYND15Q9H091 742 aa11.5□□□□□ -0.57
CTNND1-211ENST00000525821 MEN1O00255 615 aa11.49□□□□□ -0.57
CTNND1-211ENST00000525821 LZTS3O60299 673 aaPredicted RBP11.49□□□□□ -0.57
CTNND1-211ENST00000525821 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.49□□□□□ -0.57
CTNND1-211ENST00000525821 TDRD9Q8NDG6 1382 aaKnown RBP11.49□□□□□ -0.57
CTNND1-211ENST00000525821 CALR3Q96L12 384 aaKnown RBP11.48□□□□□ -0.57
CTNND1-211ENST00000525821 UCN2Q96RP3 112 aa11.48□□□□□ -0.57
CTNND1-211ENST00000525821 ARHGEF10LQ9HCE6 1279 aa11.48□□□□□ -0.57
CTNND1-211ENST00000525821 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
CTNND1-211ENST00000525821 RNF144AP50876 292 aaPredicted RBP11.47□□□□□ -0.57
CTNND1-211ENST00000525821 CLN3Q13286 438 aa11.47□□□□□ -0.57
CTNND1-211ENST00000525821 EML3Q32P44 896 aa11.47□□□□□ -0.57
CTNND1-211ENST00000525821 FOXD4L5Q5VV16 416 aaPredicted RBP11.47□□□□□ -0.57
CTNND1-211ENST00000525821 RNF217Q8TC41 542 aa11.47□□□□□ -0.57
CTNND1-211ENST00000525821 NLRP3Q96P20 1036 aa11.47□□□□□ -0.57
CTNND1-211ENST00000525821 ZNF777Q9ULD5 760 aaPredicted RBP11.47□□□□□ -0.57
CTNND1-211ENST00000525821 GPC1P35052 558 aa11.46□□□□□ -0.57
CTNND1-211ENST00000525821 TBC1D9Q6ZT07 1266 aa11.46□□□□□ -0.57
CTNND1-211ENST00000525821 CHMP7Q8WUX9 453 aaPredicted RBP11.46□□□□□ -0.57
CTNND1-211ENST00000525821 NXF1Q9UBU9 619 aaKnown RBP11.46□□□□□ -0.57
CTNND1-211ENST00000525821 RAD54L2Q9Y4B4 1467 aa11.45□□□□□ -0.58
CTNND1-211ENST00000525821 USP17L5A8MUK1 530 aa11.45□□□□□ -0.58
CTNND1-211ENST00000525821 ATP9BO43861 1147 aa11.45□□□□□ -0.58
CTNND1-211ENST00000525821 NCOA4Q13772 614 aa11.45□□□□□ -0.58
CTNND1-211ENST00000525821 RAB6BQ9NRW1 208 aa11.45□□□□□ -0.58
CTNND1-211ENST00000525821 TERTO14746 1132 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms