RNA–Protein interactions for RNA: ENST00000525395.2

LRRK1-203, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-203ENST00000525395 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
LRRK1-203ENST00000525395 POLKQ9UBT6 870 aa13.14□□□□□ -0.31
LRRK1-203ENST00000525395 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
LRRK1-203ENST00000525395 NSD2O96028 1365 aa13.13□□□□□ -0.31
LRRK1-203ENST00000525395 FLT4P35916 1363 aa13.13□□□□□ -0.31
LRRK1-203ENST00000525395 ZBTB7AO95365 584 aa13.13□□□□□ -0.31
LRRK1-203ENST00000525395 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-203ENST00000525395 ZNF827Q17R98 1081 aa13.13□□□□□ -0.31
LRRK1-203ENST00000525395 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-203ENST00000525395 SPON1Q9HCB6 807 aa13.13□□□□□ -0.31
LRRK1-203ENST00000525395 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-203ENST00000525395 BTAF1O14981 1849 aa13.13□□□□□ -0.31
LRRK1-203ENST00000525395 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
LRRK1-203ENST00000525395 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
LRRK1-203ENST00000525395 CGNL1Q0VF96 1302 aa13.12□□□□□ -0.31
LRRK1-203ENST00000525395 RAPGEF4Q8WZA2 1011 aa13.11□□□□□ -0.31
LRRK1-203ENST00000525395 EYA1Q99502 592 aa13.11□□□□□ -0.31
LRRK1-203ENST00000525395 CASZ1Q86V15 1759 aa13.11□□□□□ -0.31
LRRK1-203ENST00000525395 WASHC2AQ641Q2 1341 aa13.11□□□□□ -0.31
LRRK1-203ENST00000525395 KIF24Q5T7B8 1368 aa13.1□□□□□ -0.31
LRRK1-203ENST00000525395 CYP27B1O15528 508 aa13.1□□□□□ -0.31
LRRK1-203ENST00000525395 TATP17735 454 aaPredicted RBP13.1□□□□□ -0.31
LRRK1-203ENST00000525395 PTGER2P43116 358 aa13.1□□□□□ -0.31
LRRK1-203ENST00000525395 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
LRRK1-203ENST00000525395 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
LRRK1-203ENST00000525395 PAPPAQ13219 1627 aa13.09□□□□□ -0.31
LRRK1-203ENST00000525395 MAP2P11137 1827 aaKnown RBP13.09□□□□□ -0.31
LRRK1-203ENST00000525395 DOT1LQ8TEK3 1739 aa13.08□□□□□ -0.32
LRRK1-203ENST00000525395 EIF4A2Q14240 407 aaKnown RBP13.08□□□□□ -0.32
LRRK1-203ENST00000525395 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
LRRK1-203ENST00000525395 PPP1R1BQ9UD71 204 aaPredicted RBP13.07□□□□□ -0.32
LRRK1-203ENST00000525395 NCAPD2Q15021 1401 aa13.06□□□□□ -0.32
LRRK1-203ENST00000525395 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
LRRK1-203ENST00000525395 SLC27A3Q5K4L6 730 aa13.05□□□□□ -0.32
LRRK1-203ENST00000525395 MPRIPQ6WCQ1 1025 aa13.05□□□□□ -0.32
LRRK1-203ENST00000525395 KIF7Q2M1P5 1343 aa13.05□□□□□ -0.32
LRRK1-203ENST00000525395 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
LRRK1-203ENST00000525395 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
LRRK1-203ENST00000525395 MTFR1LQ9H019 292 aa13.04□□□□□ -0.32
LRRK1-203ENST00000525395 CCNL1Q9UK58 526 aaPredicted RBP13.04□□□□□ -0.32
LRRK1-203ENST00000525395 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
LRRK1-203ENST00000525395 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
LRRK1-203ENST00000525395 MORC1Q86VD1 984 aa13.03□□□□□ -0.32
LRRK1-203ENST00000525395 PIGBQ92521 554 aa13.03□□□□□ -0.32
LRRK1-203ENST00000525395 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
LRRK1-203ENST00000525395 SMIM5Q71RC9 77 aa13.02□□□□□ -0.33
LRRK1-203ENST00000525395 FHDC1Q9C0D6 1143 aaPredicted RBP13.02□□□□□ -0.33
LRRK1-203ENST00000525395 SPG7Q9UQ90 795 aa13.02□□□□□ -0.33
LRRK1-203ENST00000525395 LY75O60449 1722 aa13.02□□□□□ -0.33
LRRK1-203ENST00000525395 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.33
LRRK1-203ENST00000525395 PER1O15534 1290 aaPredicted RBP13.01□□□□□ -0.33
LRRK1-203ENST00000525395 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
LRRK1-203ENST00000525395 SYT17Q9BSW7 474 aa13.01□□□□□ -0.33
LRRK1-203ENST00000525395 TFCP2L1Q9NZI6 479 aa13.01□□□□□ -0.33
LRRK1-203ENST00000525395 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
LRRK1-203ENST00000525395 IGSF1Q8N6C5 1336 aa13.01□□□□□ -0.33
LRRK1-203ENST00000525395 PKD1L3Q7Z443 1732 aa13.01□□□□□ -0.33
LRRK1-203ENST00000525395 PHKG2P15735 406 aa13□□□□□ -0.33
LRRK1-203ENST00000525395 COL23A1Q86Y22 540 aaPredicted RBP13□□□□□ -0.33
LRRK1-203ENST00000525395 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
LRRK1-203ENST00000525395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.33
LRRK1-203ENST00000525395 PALLDQ8WX93 1383 aa12.99□□□□□ -0.33
LRRK1-203ENST00000525395 ARXQ96QS3 562 aa12.99□□□□□ -0.33
LRRK1-203ENST00000525395 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
LRRK1-203ENST00000525395 ITGB4P16144 1822 aa12.98□□□□□ -0.33
LRRK1-203ENST00000525395 TUBGCP6Q96RT7 1819 aa12.98□□□□□ -0.33
LRRK1-203ENST00000525395 IL13P35225 146 aa12.98□□□□□ -0.33
LRRK1-203ENST00000525395 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
LRRK1-203ENST00000525395 CC2D1BQ5T0F9 858 aaKnown RBP12.97□□□□□ -0.33
LRRK1-203ENST00000525395 SLC16A10Q8TF71 515 aa12.97□□□□□ -0.33
LRRK1-203ENST00000525395 MTHFSP49914 203 aa12.96□□□□□ -0.33
LRRK1-203ENST00000525395 ITPK1Q13572 414 aa12.96□□□□□ -0.33
LRRK1-203ENST00000525395 CNGB1Q14028 1251 aaPredicted RBP12.96□□□□□ -0.33
LRRK1-203ENST00000525395 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
LRRK1-203ENST00000525395 MSH5O43196 834 aa12.95□□□□□ -0.34
LRRK1-203ENST00000525395 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
LRRK1-203ENST00000525395 SULT6B1Q6IMI4 303 aa12.95□□□□□ -0.34
LRRK1-203ENST00000525395 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
LRRK1-203ENST00000525395 SLC4A9Q96Q91 983 aa12.95□□□□□ -0.34
LRRK1-203ENST00000525395 TMOD3Q9NYL9 352 aa12.95□□□□□ -0.34
LRRK1-203ENST00000525395 QSER1Q2KHR3 1735 aa12.94□□□□□ -0.34
LRRK1-203ENST00000525395 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
LRRK1-203ENST00000525395 SIK1P57059 783 aa12.94□□□□□ -0.34
LRRK1-203ENST00000525395 PLEKHO1Q53GL0 409 aaPredicted RBP12.94□□□□□ -0.34
LRRK1-203ENST00000525395 SMARCC1Q92922 1105 aaPredicted RBP12.94□□□□□ -0.34
LRRK1-203ENST00000525395 YY1P25490 414 aa12.93□□□□□ -0.34
LRRK1-203ENST00000525395 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
LRRK1-203ENST00000525395 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
LRRK1-203ENST00000525395 NLGN2Q8NFZ4 835 aa12.93□□□□□ -0.34
LRRK1-203ENST00000525395 KDM6AO15550 1401 aaPredicted RBP12.93□□□□□ -0.34
LRRK1-203ENST00000525395 C5P01031 1676 aa12.93□□□□□ -0.34
LRRK1-203ENST00000525395 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
LRRK1-203ENST00000525395 PHF14O94880 888 aa12.92□□□□□ -0.34
LRRK1-203ENST00000525395 COL24A1Q17RW2 1714 aa12.92□□□□□ -0.34
LRRK1-203ENST00000525395 UTRNP46939 3433 aa12.91□□□□□ -0.34
LRRK1-203ENST00000525395 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
LRRK1-203ENST00000525395 HMOX1P09601 288 aa12.91□□□□□ -0.34
LRRK1-203ENST00000525395 POLD1P28340 1107 aa12.91□□□□□ -0.34
LRRK1-203ENST00000525395 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
LRRK1-203ENST00000525395 DCAF5Q96JK2 942 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms