RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 SHANK3Q9BYB0 1731 aa15.85■□□□□ 0.13
CTTN-209ENST00000525276 ANKRD24Q8TF21 1146 aa15.84■□□□□ 0.13
CTTN-209ENST00000525276 PNPLA7Q6ZV29 1317 aa15.84■□□□□ 0.13
CTTN-209ENST00000525276 NSD2O96028 1365 aa15.84■□□□□ 0.13
CTTN-209ENST00000525276 SENP3-EIF4A1A0A087X0R7 540 aa15.83■□□□□ 0.12
CTTN-209ENST00000525276 FAM208AQ9UK61 1670 aaKnown RBP15.82■□□□□ 0.12
CTTN-209ENST00000525276 LY75O60449 1722 aa15.82■□□□□ 0.12
CTTN-209ENST00000525276 KCNQ4P56696 695 aa15.81■□□□□ 0.12
CTTN-209ENST00000525276 NLGN2Q8NFZ4 835 aa15.81■□□□□ 0.12
CTTN-209ENST00000525276 COG3Q96JB2 828 aa15.81■□□□□ 0.12
CTTN-209ENST00000525276 DOT1LQ8TEK3 1739 aa15.8■□□□□ 0.12
CTTN-209ENST00000525276 CARD14Q9BXL6 1004 aa15.79■□□□□ 0.12
CTTN-209ENST00000525276 NSD3Q9BZ95 1437 aa15.78■□□□□ 0.12
CTTN-209ENST00000525276 RGPD2P0DJD1 1756 aa15.78■□□□□ 0.12
CTTN-209ENST00000525276 FYB1O15117 783 aa15.78■□□□□ 0.12
CTTN-209ENST00000525276 GPR162Q16538 588 aa15.78■□□□□ 0.12
CTTN-209ENST00000525276 SLC27A3Q5K4L6 730 aa15.78■□□□□ 0.12
CTTN-209ENST00000525276 SLC16A10Q8TF71 515 aa15.78■□□□□ 0.12
CTTN-209ENST00000525276 IP6K1Q92551 441 aa15.77■□□□□ 0.12
CTTN-209ENST00000525276 MEGF6O75095 1541 aa15.77■□□□□ 0.11
CTTN-209ENST00000525276 YBX3P16989 372 aaKnown RBP eCLIP15.76■□□□□ 0.11
CTTN-209ENST00000525276 DDX54Q8TDD1 881 aaKnown RBP15.76■□□□□ 0.11
CTTN-209ENST00000525276 GGNBP2Q9H3C7 697 aa15.76■□□□□ 0.11
CTTN-209ENST00000525276 KIF7Q2M1P5 1343 aa15.75■□□□□ 0.11
CTTN-209ENST00000525276 PRIM1P49642 420 aaKnown RBP15.75■□□□□ 0.11
CTTN-209ENST00000525276 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
CTTN-209ENST00000525276 FBLN1P23142 703 aa15.74■□□□□ 0.11
CTTN-209ENST00000525276 PANK3Q9H999 370 aa15.74■□□□□ 0.11
CTTN-209ENST00000525276 GIGYF1O75420 1035 aaPredicted RBP15.73■□□□□ 0.11
CTTN-209ENST00000525276 POLD1P28340 1107 aa15.73■□□□□ 0.11
CTTN-209ENST00000525276 KLHL34Q8N239 644 aa15.73■□□□□ 0.11
CTTN-209ENST00000525276 TFCP2L1Q9NZI6 479 aa15.73■□□□□ 0.11
CTTN-209ENST00000525276 COL23A1Q86Y22 540 aaPredicted RBP15.72■□□□□ 0.11
CTTN-209ENST00000525276 LTV1Q96GA3 475 aaPredicted RBP15.72■□□□□ 0.11
CTTN-209ENST00000525276 KIF20BQ96Q89 1820 aa15.72■□□□□ 0.11
CTTN-209ENST00000525276 PCNTO95613 3336 aa15.72■□□□□ 0.11
CTTN-209ENST00000525276 MAP3K19Q56UN5 1328 aa15.71■□□□□ 0.11
CTTN-209ENST00000525276 HOXC9P31274 260 aa15.71■□□□□ 0.11
CTTN-209ENST00000525276 PELP1Q8IZL8 1130 aaKnown RBP15.7■□□□□ 0.1
CTTN-209ENST00000525276 SYTL4Q96C24 671 aaPredicted RBP15.7■□□□□ 0.1
CTTN-209ENST00000525276 AMPHP49418 695 aa15.69■□□□□ 0.1
CTTN-209ENST00000525276 C5P01031 1676 aa15.69■□□□□ 0.1
CTTN-209ENST00000525276 TOGARAM1Q9Y4F4 1720 aa15.68■□□□□ 0.1
CTTN-209ENST00000525276 TAF1LQ8IZX4 1826 aa15.68■□□□□ 0.1
CTTN-209ENST00000525276 RTL1A6NKG5 1358 aa15.68■□□□□ 0.1
CTTN-209ENST00000525276 IFFO2Q5TF58 517 aa15.68■□□□□ 0.1
CTTN-209ENST00000525276 AMIGO3Q86WK7 504 aa15.68■□□□□ 0.1
CTTN-209ENST00000525276 ZCRB1Q8TBF4 217 aaKnown RBP15.68■□□□□ 0.1
CTTN-209ENST00000525276 CCNL1Q9UK58 526 aaPredicted RBP15.68■□□□□ 0.1
CTTN-209ENST00000525276 ADCY9O60503 1353 aa15.67■□□□□ 0.1
CTTN-209ENST00000525276 RRS1Q15050 365 aaKnown RBP15.67■□□□□ 0.1
CTTN-209ENST00000525276 NBPF6Q5VWK0 638 aa15.67■□□□□ 0.1
CTTN-209ENST00000525276 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
CTTN-209ENST00000525276 NBPF4Q96M43 638 aa15.67■□□□□ 0.1
CTTN-209ENST00000525276 KNSTRNQ9Y448 316 aa15.67■□□□□ 0.1
CTTN-209ENST00000525276 ATP10DQ9P241 1426 aa15.67■□□□□ 0.1
CTTN-209ENST00000525276 WASHC2AQ641Q2 1341 aa15.67■□□□□ 0.1
CTTN-209ENST00000525276 KIF24Q5T7B8 1368 aa15.64■□□□□ 0.09
CTTN-209ENST00000525276 GRIN3BO60391 1043 aa15.64■□□□□ 0.09
CTTN-209ENST00000525276 USHBP1Q8N6Y0 703 aa15.64■□□□□ 0.09
CTTN-209ENST00000525276 UBR3Q6ZT12 1888 aa15.63■□□□□ 0.09
CTTN-209ENST00000525276 FLT4P35916 1363 aa15.62■□□□□ 0.09
CTTN-209ENST00000525276 ZEB1P37275 1124 aaPredicted RBP15.62■□□□□ 0.09
CTTN-209ENST00000525276 C4BP0C0L5 1744 aa15.62■□□□□ 0.09
CTTN-209ENST00000525276 ANKRD26Q9UPS8 1709 aa15.62■□□□□ 0.09
CTTN-209ENST00000525276 INSRP06213 1382 aa15.62■□□□□ 0.09
CTTN-209ENST00000525276 MAP2P11137 1827 aaKnown RBP15.61■□□□□ 0.09
CTTN-209ENST00000525276 ITGB4P16144 1822 aa15.61■□□□□ 0.09
CTTN-209ENST00000525276 SMG6Q86US8 1419 aaKnown RBP15.61■□□□□ 0.09
CTTN-209ENST00000525276 SMIM5Q71RC9 77 aa15.61■□□□□ 0.09
CTTN-209ENST00000525276 MORC1Q86VD1 984 aa15.61■□□□□ 0.09
CTTN-209ENST00000525276 CD2APQ9Y5K6 639 aa15.61■□□□□ 0.09
CTTN-209ENST00000525276 EMILIN1Q9Y6C2 1016 aa15.61■□□□□ 0.09
CTTN-209ENST00000525276 PPM1GO15355 546 aaPredicted RBP15.6■□□□□ 0.09
CTTN-209ENST00000525276 MSH5O43196 834 aa15.6■□□□□ 0.09
CTTN-209ENST00000525276 TNNT2P45379 298 aaPredicted RBP15.6■□□□□ 0.09
CTTN-209ENST00000525276 HSP90AB2PQ58FF8 381 aa15.6■□□□□ 0.09
CTTN-209ENST00000525276 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
CTTN-209ENST00000525276 PALLDQ8WX93 1383 aa15.6■□□□□ 0.09
CTTN-209ENST00000525276 CYP27B1O15528 508 aa15.59■□□□□ 0.09
CTTN-209ENST00000525276 PER1O15534 1290 aaPredicted RBP15.59■□□□□ 0.09
CTTN-209ENST00000525276 POLKQ9UBT6 870 aa15.59■□□□□ 0.09
CTTN-209ENST00000525276 PKD1L3Q7Z443 1732 aa15.59■□□□□ 0.09
CTTN-209ENST00000525276 NCAPD2Q15021 1401 aa15.57■□□□□ 0.08
CTTN-209ENST00000525276 PCDH11XQ9BZA7 1347 aa15.56■□□□□ 0.08
CTTN-209ENST00000525276 PCDH11YQ9BZA8 1340 aa15.56■□□□□ 0.08
CTTN-209ENST00000525276 CICQ96RK0 1608 aaPredicted RBP15.56■□□□□ 0.08
CTTN-209ENST00000525276 KIAA1551Q9HCM1 1747 aa15.56■□□□□ 0.08
CTTN-209ENST00000525276 NPC1L1Q9UHC9 1359 aa15.55■□□□□ 0.08
CTTN-209ENST00000525276 HSPA6P17066 643 aa15.55■□□□□ 0.08
CTTN-209ENST00000525276 MPRIPQ6WCQ1 1025 aa15.55■□□□□ 0.08
CTTN-209ENST00000525276 RAPGEF4Q8WZA2 1011 aa15.55■□□□□ 0.08
CTTN-209ENST00000525276 GPBP1L1Q9HC44 474 aaPredicted RBP15.55■□□□□ 0.08
CTTN-209ENST00000525276 IGSF1Q8N6C5 1336 aa15.54■□□□□ 0.08
CTTN-209ENST00000525276 CC2D1BQ5T0F9 858 aaKnown RBP15.54■□□□□ 0.08
CTTN-209ENST00000525276 ZNF526Q8TF50 670 aaPredicted RBP15.54■□□□□ 0.08
CTTN-209ENST00000525276 WWC3Q9ULE0 1092 aa15.54■□□□□ 0.08
CTTN-209ENST00000525276 KIF3CO14782 793 aa15.53■□□□□ 0.08
CTTN-209ENST00000525276 TATP17735 454 aaPredicted RBP15.53■□□□□ 0.08
CTTN-209ENST00000525276 LINC00116Q8NCU8 138 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms