RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 KIF15Q9NS87 1388 aa8.94□□□□□ -0.98
ATM-206ENST00000525056 ARHGEF5Q12774 1597 aa8.94□□□□□ -0.98
ATM-206ENST00000525056 NDUFV2P19404 249 aa8.93□□□□□ -0.98
ATM-206ENST00000525056 ANP32AP39687 249 aaKnown RBP8.93□□□□□ -0.98
ATM-206ENST00000525056 PDE3BQ13370 1112 aa8.93□□□□□ -0.98
ATM-206ENST00000525056 IL27Q8NEV9 243 aa8.93□□□□□ -0.98
ATM-206ENST00000525056 KIF7Q2M1P5 1343 aa8.93□□□□□ -0.98
ATM-206ENST00000525056 SYCP2Q9BX26 1530 aa8.93□□□□□ -0.98
ATM-206ENST00000525056 REREQ9P2R6 1566 aa8.93□□□□□ -0.98
ATM-206ENST00000525056 STRCQ7RTU9 1775 aa8.92□□□□□ -0.98
ATM-206ENST00000525056 E9PCH4 1651 aa8.92□□□□□ -0.98
ATM-206ENST00000525056 EIF2AK4Q9P2K8 1649 aaKnown RBP8.92□□□□□ -0.98
ATM-206ENST00000525056 GPATCH8Q9UKJ3 1502 aaKnown RBP8.92□□□□□ -0.98
ATM-206ENST00000525056 USP47Q96K76 1375 aa8.92□□□□□ -0.98
ATM-206ENST00000525056 GUCA2AQ02747 115 aa8.92□□□□□ -0.98
ATM-206ENST00000525056 RALBP1Q15311 655 aa8.92□□□□□ -0.98
ATM-206ENST00000525056 NKX2-3Q8TAU0 364 aa8.92□□□□□ -0.98
ATM-206ENST00000525056 RSPH6AQ9H0K4 717 aa8.92□□□□□ -0.98
ATM-206ENST00000525056 RRP7BPQ9NSQ0 103 aa8.92□□□□□ -0.98
ATM-206ENST00000525056 ZNF644Q9H582 1327 aaPredicted RBP8.91□□□□□ -0.98
ATM-206ENST00000525056 FDX1P10109 184 aa8.91□□□□□ -0.98
ATM-206ENST00000525056 MYSM1Q5VVJ2 828 aa8.91□□□□□ -0.98
ATM-206ENST00000525056 THAP11Q96EK4 314 aa8.91□□□□□ -0.98
ATM-206ENST00000525056 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
ATM-206ENST00000525056 CFDP1Q9UEE9 299 aaPredicted RBP8.91□□□□□ -0.98
ATM-206ENST00000525056 SALL2Q9Y467 1007 aaPredicted RBP8.91□□□□□ -0.98
ATM-206ENST00000525056 CLTCQ00610 1675 aaKnown RBP8.91□□□□□ -0.98
ATM-206ENST00000525056 MLH3Q9UHC1 1453 aa8.9□□□□□ -0.98
ATM-206ENST00000525056 LRPPRCP42704 1394 aaKnown RBP8.9□□□□□ -0.98
ATM-206ENST00000525056 DHX29Q7Z478 1369 aaKnown RBP8.9□□□□□ -0.98
ATM-206ENST00000525056 SPTLC1O15269 473 aa8.9□□□□□ -0.98
ATM-206ENST00000525056 TLL1O43897 1013 aa8.9□□□□□ -0.98
ATM-206ENST00000525056 GJA5P36382 358 aa8.9□□□□□ -0.98
ATM-206ENST00000525056 Q3C1V9 767 aa8.9□□□□□ -0.98
ATM-206ENST00000525056 RSBN1LQ6PCB5 846 aaPredicted RBP8.9□□□□□ -0.98
ATM-206ENST00000525056 BRICD5Q6PL45 260 aa8.9□□□□□ -0.98
ATM-206ENST00000525056 RIC3Q7Z5B4 369 aa8.9□□□□□ -0.98
ATM-206ENST00000525056 HIRIP3Q9BW71 556 aaPredicted RBP8.9□□□□□ -0.98
ATM-206ENST00000525056 USP35Q9P2H5 1018 aa8.9□□□□□ -0.98
ATM-206ENST00000525056 PCDHGC3Q9UN70 934 aa8.9□□□□□ -0.98
ATM-206ENST00000525056 NOP58Q9Y2X3 529 aaKnown RBP8.9□□□□□ -0.98
ATM-206ENST00000525056 SPAG9O60271 1321 aaKnown RBP8.89□□□□□ -0.99
ATM-206ENST00000525056 FMNL1O95466 1100 aaPredicted RBP8.89□□□□□ -0.99
ATM-206ENST00000525056 INO80Q9ULG1 1556 aaPredicted RBP8.89□□□□□ -0.99
ATM-206ENST00000525056 ANKRD50Q9ULJ7 1429 aa8.88□□□□□ -0.99
ATM-206ENST00000525056 MYBBP1AQ9BQG0 1328 aaKnown RBP8.88□□□□□ -0.99
ATM-206ENST00000525056 MAST1Q9Y2H9 1570 aa8.88□□□□□ -0.99
ATM-206ENST00000525056 RNF19BQ6ZMZ0 732 aa8.88□□□□□ -0.99
ATM-206ENST00000525056 FBXO41Q8TF61 875 aa8.88□□□□□ -0.99
ATM-206ENST00000525056 SPSB2Q99619 263 aa8.88□□□□□ -0.99
ATM-206ENST00000525056 POLR3EQ9NVU0 708 aa8.88□□□□□ -0.99
ATM-206ENST00000525056 MROH2AA6NES4 1674 aa8.88□□□□□ -0.99
ATM-206ENST00000525056 AGLP35573 1532 aa8.87□□□□□ -0.99
ATM-206ENST00000525056 ATP7AQ04656 1500 aa8.87□□□□□ -0.99
ATM-206ENST00000525056 TCERG1O14776 1098 aaKnown RBP8.87□□□□□ -0.99
ATM-206ENST00000525056 ADH1BP00325 375 aa8.87□□□□□ -0.99
ATM-206ENST00000525056 SKIV2LQ15477 1246 aaKnown RBP8.87□□□□□ -0.99
ATM-206ENST00000525056 SH3D19Q5HYK7 790 aa8.87□□□□□ -0.99
ATM-206ENST00000525056 GGT6Q6P531 493 aa8.87□□□□□ -0.99
ATM-206ENST00000525056 CCDC136Q96JN2 1154 aa8.87□□□□□ -0.99
ATM-206ENST00000525056 LIMD1Q9UGP4 676 aa8.87□□□□□ -0.99
ATM-206ENST00000525056 PCDHB15Q9Y5E8 787 aa8.87□□□□□ -0.99
ATM-206ENST00000525056 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
ATM-206ENST00000525056 FAM9BQ8IZU0 186 aa8.86□□□□□ -0.99
ATM-206ENST00000525056 SYMPKQ92797 1274 aaKnown RBP8.86□□□□□ -0.99
ATM-206ENST00000525056 CHIC2Q9UKJ5 165 aa8.86□□□□□ -0.99
ATM-206ENST00000525056 C6orf229H3BNL8 230 aa8.85□□□□□ -0.99
ATM-206ENST00000525056 CLK2P49760 499 aaKnown RBP8.85□□□□□ -0.99
ATM-206ENST00000525056 TUSC1Q2TAM9 212 aa8.85□□□□□ -0.99
ATM-206ENST00000525056 FAM160A2Q8N612 972 aaPredicted RBP8.85□□□□□ -0.99
ATM-206ENST00000525056 TMC1Q8TDI8 760 aa8.85□□□□□ -0.99
ATM-206ENST00000525056 IPO9Q96P70 1041 aaKnown RBP8.85□□□□□ -0.99
ATM-206ENST00000525056 USB1Q9BQ65 265 aaKnown RBP8.85□□□□□ -0.99
ATM-206ENST00000525056 UNC13BO14795 1591 aa8.85□□□□□ -0.99
ATM-206ENST00000525056 PLXNC1O60486 1568 aa8.85□□□□□ -0.99
ATM-206ENST00000525056 CSPP1Q1MSJ5 1256 aa8.84□□□□□ -0.99
ATM-206ENST00000525056 NBPF8Q3BBV2 869 aa8.84□□□□□ -0.99
ATM-206ENST00000525056 GOPCQ9HD26 462 aa8.84□□□□□ -0.99
ATM-206ENST00000525056 GPRASP1Q5JY77 1395 aa8.84□□□□□ -0.99
ATM-206ENST00000525056 TRPM1Q7Z4N2 1603 aa8.83□□□□□ -1
ATM-206ENST00000525056 A2MP01023 1474 aa8.83□□□□□ -1
ATM-206ENST00000525056 A0A0G2JS52 829 aa8.83□□□□□ -1
ATM-206ENST00000525056 PPP1R18Q6NYC8 613 aa8.83□□□□□ -1
ATM-206ENST00000525056 NLRP13Q86W25 1043 aa8.83□□□□□ -1
ATM-206ENST00000525056 PROCA1Q8NCQ7 364 aaPredicted RBP8.83□□□□□ -1
ATM-206ENST00000525056 PNISRQ8TF01 805 aaKnown RBP8.83□□□□□ -1
ATM-206ENST00000525056 SLC6A16Q9GZN6 736 aa8.83□□□□□ -1
ATM-206ENST00000525056 MYO3AQ8NEV4 1616 aa8.83□□□□□ -1
ATM-206ENST00000525056 CCDC141Q6ZP82 1450 aa8.83□□□□□ -1
ATM-206ENST00000525056 ZNF142P52746 1687 aaPredicted RBP8.82□□□□□ -1
ATM-206ENST00000525056 S1PR4O95977 384 aa8.82□□□□□ -1
ATM-206ENST00000525056 MTMR2Q13614 643 aa8.82□□□□□ -1
ATM-206ENST00000525056 MSS51Q4VC12 460 aa8.82□□□□□ -1
ATM-206ENST00000525056 PRPF38BQ5VTL8 546 aaKnown RBP8.82□□□□□ -1
ATM-206ENST00000525056 RETREG3Q86VR2 466 aa8.82□□□□□ -1
ATM-206ENST00000525056 ZMYM3Q14202 1370 aa8.82□□□□□ -1
ATM-206ENST00000525056 PARD3Q8TEW0 1356 aa8.82□□□□□ -1
ATM-206ENST00000525056 PRDM15P57071 1507 aaPredicted RBP8.81□□□□□ -1
ATM-206ENST00000525056 SPDYE5A6NIY4 337 aa8.81□□□□□ -1
ATM-206ENST00000525056 PPM1GO15355 546 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms