RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 TWISTNBQ3B726 338 aaPredicted RBP24.78■■□□□ 1.56
TM9SF1-203ENST00000524835 FTSJ3Q8IY81 847 aaKnown RBP24.78■■□□□ 1.56
TM9SF1-203ENST00000524835 ZNF335Q9H4Z2 1342 aaPredicted RBP24.78■■□□□ 1.56
TM9SF1-203ENST00000524835 PXDNQ92626 1479 aa24.78■■□□□ 1.56
TM9SF1-203ENST00000524835 ZBTB7CA1YPR0 619 aa24.77■■□□□ 1.56
TM9SF1-203ENST00000524835 NBPF6Q5VWK0 638 aa24.77■■□□□ 1.56
TM9SF1-203ENST00000524835 USHBP1Q8N6Y0 703 aa24.77■■□□□ 1.56
TM9SF1-203ENST00000524835 NBPF4Q96M43 638 aa24.77■■□□□ 1.56
TM9SF1-203ENST00000524835 HTATSF1O43719 755 aaKnown RBP24.76■■□□□ 1.55
TM9SF1-203ENST00000524835 RTF1Q92541 710 aaKnown RBP24.76■■□□□ 1.55
TM9SF1-203ENST00000524835 NCAPD2Q15021 1401 aa24.76■■□□□ 1.55
TM9SF1-203ENST00000524835 RGPD2P0DJD1 1756 aa24.76■■□□□ 1.55
TM9SF1-203ENST00000524835 ELL2O00472 640 aaPredicted RBP24.75■■□□□ 1.55
TM9SF1-203ENST00000524835 TCERG1O14776 1098 aaKnown RBP24.75■■□□□ 1.55
TM9SF1-203ENST00000524835 IPO8O15397 1037 aaKnown RBP24.75■■□□□ 1.55
TM9SF1-203ENST00000524835 MRPL50Q8N5N7 158 aaKnown RBP24.75■■□□□ 1.55
TM9SF1-203ENST00000524835 TNS3Q68CZ2 1445 aa24.75■■□□□ 1.55
TM9SF1-203ENST00000524835 PLEKHG5O94827 1062 aa24.74■■□□□ 1.55
TM9SF1-203ENST00000524835 KIAA0232Q92628 1395 aa24.74■■□□□ 1.55
TM9SF1-203ENST00000524835 CAMTA1Q9Y6Y1 1673 aa24.73■■□□□ 1.55
TM9SF1-203ENST00000524835 MAP3K5Q99683 1374 aa24.73■■□□□ 1.55
TM9SF1-203ENST00000524835 GNAT3A8MTJ3 354 aa24.73■■□□□ 1.55
TM9SF1-203ENST00000524835 IGHDP01880 384 aa24.72■■□□□ 1.55
TM9SF1-203ENST00000524835 SKAP1Q86WV1 359 aa24.72■■□□□ 1.55
TM9SF1-203ENST00000524835 LRRC59Q96AG4 307 aaKnown RBP24.71■■□□□ 1.55
TM9SF1-203ENST00000524835 BRINP3Q76B58 766 aa24.71■■□□□ 1.55
TM9SF1-203ENST00000524835 AXIN2Q9Y2T1 843 aa24.71■■□□□ 1.55
TM9SF1-203ENST00000524835 CRYBG1Q9Y4K1 1723 aa24.7■■□□□ 1.55
TM9SF1-203ENST00000524835 KRT24Q2M2I5 525 aa24.7■■□□□ 1.54
TM9SF1-203ENST00000524835 ARHGAP45Q92619 1136 aa24.7■■□□□ 1.54
TM9SF1-203ENST00000524835 PCDHB15Q9Y5E8 787 aa24.7■■□□□ 1.54
TM9SF1-203ENST00000524835 TMEM57Q8N5G2 664 aa24.69■■□□□ 1.54
TM9SF1-203ENST00000524835 ANKRD24Q8TF21 1146 aa24.69■■□□□ 1.54
TM9SF1-203ENST00000524835 SPATA31A3Q5VYP0 1347 aa24.69■■□□□ 1.54
TM9SF1-203ENST00000524835 DDX19BQ9UMR2 479 aa24.69■■□□□ 1.54
TM9SF1-203ENST00000524835 ITPRIPQ8IWB1 547 aa24.68■■□□□ 1.54
TM9SF1-203ENST00000524835 RGPD5Q99666 1765 aa24.67■■□□□ 1.54
TM9SF1-203ENST00000524835 IL17REQ8NFR9 667 aa24.67■■□□□ 1.54
TM9SF1-203ENST00000524835 LMO7Q8WWI1 1683 aa24.67■■□□□ 1.54
TM9SF1-203ENST00000524835 ZC3H6P61129 1189 aaKnown RBP24.67■■□□□ 1.54
TM9SF1-203ENST00000524835 MIS18AQ9NYP9 233 aa24.67■■□□□ 1.54
TM9SF1-203ENST00000524835 TSPYL4Q9UJ04 414 aa24.67■■□□□ 1.54
TM9SF1-203ENST00000524835 HAP1P54257 671 aaPredicted RBP24.66■■□□□ 1.54
TM9SF1-203ENST00000524835 COL18A1P39060 1754 aa24.65■■□□□ 1.54
TM9SF1-203ENST00000524835 ERBB3P21860 1342 aa24.65■■□□□ 1.54
TM9SF1-203ENST00000524835 SLAIN2Q9P270 581 aa24.64■■□□□ 1.53
TM9SF1-203ENST00000524835 ABCC6O95255 1503 aa24.64■■□□□ 1.53
TM9SF1-203ENST00000524835 CEMIPQ8WUJ3 1361 aa24.63■■□□□ 1.53
TM9SF1-203ENST00000524835 ABCC4O15439 1325 aa24.63■■□□□ 1.53
TM9SF1-203ENST00000524835 CABLES1Q8TDN4 633 aa24.62■■□□□ 1.53
TM9SF1-203ENST00000524835 ZBTB40Q9NUA8 1239 aa24.61■■□□□ 1.53
TM9SF1-203ENST00000524835 BABAM1Q9NWV8 329 aa24.61■■□□□ 1.53
TM9SF1-203ENST00000524835 SOS2Q07890 1332 aaPredicted RBP24.6■■□□□ 1.53
TM9SF1-203ENST00000524835 AMOTQ4VCS5 1084 aa24.59■■□□□ 1.53
TM9SF1-203ENST00000524835 PLEKHO1Q53GL0 409 aaPredicted RBP24.59■■□□□ 1.53
TM9SF1-203ENST00000524835 API5Q9BZZ5 524 aaKnown RBP24.59■■□□□ 1.53
TM9SF1-203ENST00000524835 CPDO75976 1380 aa24.59■■□□□ 1.53
TM9SF1-203ENST00000524835 TAF7Q15545 349 aaPredicted RBP24.58■■□□□ 1.53
TM9SF1-203ENST00000524835 RWDD1Q9H446 243 aaPredicted RBP24.58■■□□□ 1.53
TM9SF1-203ENST00000524835 RGS12O14924 1447 aa24.58■■□□□ 1.52
TM9SF1-203ENST00000524835 FAM208AQ9UK61 1670 aaKnown RBP24.57■■□□□ 1.52
TM9SF1-203ENST00000524835 AKAP4Q5JQC9 854 aa24.57■■□□□ 1.52
TM9SF1-203ENST00000524835 ZNF530Q6P9A1 599 aaPredicted RBP24.57■■□□□ 1.52
TM9SF1-203ENST00000524835 PDE4AP27815 886 aa24.56■■□□□ 1.52
TM9SF1-203ENST00000524835 HDAC1Q13547 482 aaPredicted RBP24.55■■□□□ 1.52
TM9SF1-203ENST00000524835 BACH2Q9BYV9 841 aa24.55■■□□□ 1.52
TM9SF1-203ENST00000524835 ZBTB7BO15156 539 aaPredicted RBP24.54■■□□□ 1.52
TM9SF1-203ENST00000524835 LGR6Q9HBX8 967 aa24.54■■□□□ 1.52
TM9SF1-203ENST00000524835 OVOS2A0A0G2JMS6 1433 aa24.53■■□□□ 1.52
TM9SF1-203ENST00000524835 NHSL1Q5SYE7 1610 aa24.53■■□□□ 1.52
TM9SF1-203ENST00000524835 CHRNA2Q15822 529 aa24.53■■□□□ 1.52
TM9SF1-203ENST00000524835 KDM3BQ7LBC6 1761 aa24.53■■□□□ 1.52
TM9SF1-203ENST00000524835 PTPRCP08575 1304 aa24.53■■□□□ 1.52
TM9SF1-203ENST00000524835 SOS1Q07889 1333 aaPredicted RBP24.53■■□□□ 1.52
TM9SF1-203ENST00000524835 RGS3P49796 1198 aa24.52■■□□□ 1.52
TM9SF1-203ENST00000524835 CHMP4BQ9H444 224 aaKnown RBP24.51■■□□□ 1.51
TM9SF1-203ENST00000524835 NLRP2Q9NX02 1062 aa24.51■■□□□ 1.51
TM9SF1-203ENST00000524835 ADAMTS7Q9UKP4 1686 aa24.5■■□□□ 1.51
TM9SF1-203ENST00000524835 ABCA3Q99758 1704 aa24.5■■□□□ 1.51
TM9SF1-203ENST00000524835 SLC4A2P04920 1241 aa24.5■■□□□ 1.51
TM9SF1-203ENST00000524835 C1orf141Q5JVX7 400 aa24.49■■□□□ 1.51
TM9SF1-203ENST00000524835 VIRMAQ69YN4 1812 aaKnown RBP24.49■■□□□ 1.51
TM9SF1-203ENST00000524835 INTS3Q68E01 1043 aaKnown RBP24.49■■□□□ 1.51
TM9SF1-203ENST00000524835 MPRIPQ6WCQ1 1025 aa24.49■■□□□ 1.51
TM9SF1-203ENST00000524835 MEGF6O75095 1541 aa24.48■■□□□ 1.51
TM9SF1-203ENST00000524835 PLEKHG2Q9H7P9 1386 aa24.47■■□□□ 1.51
TM9SF1-203ENST00000524835 RNMTO43148 476 aaKnown RBP24.47■■□□□ 1.51
TM9SF1-203ENST00000524835 PDZRN3Q9UPQ7 1066 aa24.47■■□□□ 1.51
TM9SF1-203ENST00000524835 RAPGEF4Q8WZA2 1011 aa24.47■■□□□ 1.51
TM9SF1-203ENST00000524835 CSB-PGBD3P0DP91 1061 aa24.45■■□□□ 1.51
TM9SF1-203ENST00000524835 TEFQ10587 303 aa24.45■■□□□ 1.51
TM9SF1-203ENST00000524835 CCDC30Q5VVM6 783 aa24.45■■□□□ 1.51
TM9SF1-203ENST00000524835 G2E3Q7L622 706 aa24.45■■□□□ 1.51
TM9SF1-203ENST00000524835 SIPA1L3O60292 1781 aaPredicted RBP24.44■■□□□ 1.5
TM9SF1-203ENST00000524835 EIF4A1P60842 406 aaKnown RBP24.44■■□□□ 1.5
TM9SF1-203ENST00000524835 SMC5Q8IY18 1101 aa24.44■■□□□ 1.5
TM9SF1-203ENST00000524835 STK31Q9BXU1 1019 aa24.44■■□□□ 1.5
TM9SF1-203ENST00000524835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.43■■□□□ 1.5
TM9SF1-203ENST00000524835 TATP17735 454 aaPredicted RBP24.42■■□□□ 1.5
TM9SF1-203ENST00000524835 FAM161AQ3B820 660 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms