RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
SWAP70-203ENST00000524817 DCTN1Q14203 1278 aa17.42■□□□□ 0.38
SWAP70-203ENST00000524817 ACSBG1Q96GR2 724 aa17.42■□□□□ 0.38
SWAP70-203ENST00000524817 ILDR2Q71H61 639 aa17.42■□□□□ 0.38
SWAP70-203ENST00000524817 EXOC5O00471 708 aa17.41■□□□□ 0.38
SWAP70-203ENST00000524817 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
SWAP70-203ENST00000524817 NWD2Q9ULI1 1742 aa17.41■□□□□ 0.38
SWAP70-203ENST00000524817 PDE3BQ13370 1112 aa17.41■□□□□ 0.38
SWAP70-203ENST00000524817 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
SWAP70-203ENST00000524817 THUMPD2Q9BTF0 503 aaKnown RBP17.4■□□□□ 0.38
SWAP70-203ENST00000524817 APAF1O14727 1248 aa17.4■□□□□ 0.38
SWAP70-203ENST00000524817 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
SWAP70-203ENST00000524817 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
SWAP70-203ENST00000524817 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.38
SWAP70-203ENST00000524817 ZNF530Q6P9A1 599 aaPredicted RBP17.39■□□□□ 0.37
SWAP70-203ENST00000524817 CYP27B1O15528 508 aa17.39■□□□□ 0.37
SWAP70-203ENST00000524817 MARCH10Q8NA82 808 aaPredicted RBP17.38■□□□□ 0.37
SWAP70-203ENST00000524817 MAPK8IP3Q9UPT6 1336 aa17.37■□□□□ 0.37
SWAP70-203ENST00000524817 FCHSD2O94868 740 aa17.36■□□□□ 0.37
SWAP70-203ENST00000524817 MCM10Q7L590 875 aa17.36■□□□□ 0.37
SWAP70-203ENST00000524817 LGR6Q9HBX8 967 aa17.36■□□□□ 0.37
SWAP70-203ENST00000524817 RGS12O14924 1447 aa17.36■□□□□ 0.37
SWAP70-203ENST00000524817 BARGINQ6ZT62 677 aa17.36■□□□□ 0.37
SWAP70-203ENST00000524817 PLEKHF1Q96S99 279 aa17.36■□□□□ 0.37
SWAP70-203ENST00000524817 FAM208AQ9UK61 1670 aaKnown RBP17.35■□□□□ 0.37
SWAP70-203ENST00000524817 CCER2I3L3R5 266 aa17.35■□□□□ 0.37
SWAP70-203ENST00000524817 KCNQ2O43526 872 aa17.35■□□□□ 0.37
SWAP70-203ENST00000524817 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
SWAP70-203ENST00000524817 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
SWAP70-203ENST00000524817 PLEKHO1Q53GL0 409 aaPredicted RBP17.34■□□□□ 0.37
SWAP70-203ENST00000524817 NEFMP07197 916 aa17.34■□□□□ 0.37
SWAP70-203ENST00000524817 KDRP35968 1356 aa17.33■□□□□ 0.37
SWAP70-203ENST00000524817 RIPK4P57078 832 aa17.33■□□□□ 0.36
SWAP70-203ENST00000524817 MIS18AQ9NYP9 233 aa17.32■□□□□ 0.36
SWAP70-203ENST00000524817 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
SWAP70-203ENST00000524817 RGPD1P0DJD0 1748 aa17.32■□□□□ 0.36
SWAP70-203ENST00000524817 C1orf141Q5JVX7 400 aa17.32■□□□□ 0.36
SWAP70-203ENST00000524817 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.32■□□□□ 0.36
SWAP70-203ENST00000524817 ONECUT3O60422 494 aaPredicted RBP17.31■□□□□ 0.36
SWAP70-203ENST00000524817 RUNDC1Q96C34 613 aa17.31■□□□□ 0.36
SWAP70-203ENST00000524817 DISP2A7MBM2 1401 aa17.31■□□□□ 0.36
SWAP70-203ENST00000524817 TRIM37O94972 964 aa17.31■□□□□ 0.36
SWAP70-203ENST00000524817 BRWD3Q6RI45 1802 aa17.31■□□□□ 0.36
SWAP70-203ENST00000524817 PHKG2P15735 406 aa17.31■□□□□ 0.36
SWAP70-203ENST00000524817 LAS1LQ9Y4W2 734 aaKnown RBP17.31■□□□□ 0.36
SWAP70-203ENST00000524817 ABCC6O95255 1503 aa17.31■□□□□ 0.36
SWAP70-203ENST00000524817 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
SWAP70-203ENST00000524817 PRIM1P49642 420 aaKnown RBP17.3■□□□□ 0.36
SWAP70-203ENST00000524817 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
SWAP70-203ENST00000524817 HNRNPUQ00839 825 aaKnown RBP eCLIP17.3■□□□□ 0.36
SWAP70-203ENST00000524817 KCNQ4P56696 695 aa17.29■□□□□ 0.36
SWAP70-203ENST00000524817 IFNL2Q8IZJ0 200 aa17.29■□□□□ 0.36
SWAP70-203ENST00000524817 IL17REQ8NFR9 667 aa17.28■□□□□ 0.36
SWAP70-203ENST00000524817 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.36
SWAP70-203ENST00000524817 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.36
SWAP70-203ENST00000524817 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
SWAP70-203ENST00000524817 AMOTQ4VCS5 1084 aa17.27■□□□□ 0.35
SWAP70-203ENST00000524817 SLC39A6Q13433 755 aa17.26■□□□□ 0.35
SWAP70-203ENST00000524817 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
SWAP70-203ENST00000524817 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
SWAP70-203ENST00000524817 CDCA7Q9BWT1 371 aaPredicted RBP17.26■□□□□ 0.35
SWAP70-203ENST00000524817 NCAPD2Q15021 1401 aa17.26■□□□□ 0.35
SWAP70-203ENST00000524817 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
SWAP70-203ENST00000524817 RTF1Q92541 710 aaKnown RBP17.26■□□□□ 0.35
SWAP70-203ENST00000524817 GAS2L2Q8NHY3 880 aa17.25■□□□□ 0.35
SWAP70-203ENST00000524817 TNS2Q63HR2 1409 aa17.25■□□□□ 0.35
SWAP70-203ENST00000524817 AKAP4Q5JQC9 854 aa17.24■□□□□ 0.35
SWAP70-203ENST00000524817 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
SWAP70-203ENST00000524817 RNMTO43148 476 aaKnown RBP17.23■□□□□ 0.35
SWAP70-203ENST00000524817 KCNQ3O43525 872 aa17.23■□□□□ 0.35
SWAP70-203ENST00000524817 THSD7AQ9UPZ6 1657 aa17.22■□□□□ 0.35
SWAP70-203ENST00000524817 CABP4P57796 275 aa17.22■□□□□ 0.35
SWAP70-203ENST00000524817 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
SWAP70-203ENST00000524817 PTCD1O75127 700 aaKnown RBP17.22■□□□□ 0.35
SWAP70-203ENST00000524817 DEFB132Q7Z7B7 95 aa17.22■□□□□ 0.35
SWAP70-203ENST00000524817 KDM6AO15550 1401 aaPredicted RBP17.22■□□□□ 0.35
SWAP70-203ENST00000524817 PIGBQ92521 554 aa17.21■□□□□ 0.35
SWAP70-203ENST00000524817 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
SWAP70-203ENST00000524817 MAP3K5Q99683 1374 aa17.21■□□□□ 0.35
SWAP70-203ENST00000524817 TEFQ10587 303 aa17.21■□□□□ 0.35
SWAP70-203ENST00000524817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.21■□□□□ 0.35
SWAP70-203ENST00000524817 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
SWAP70-203ENST00000524817 SHANK3Q9BYB0 1731 aa17.21■□□□□ 0.34
SWAP70-203ENST00000524817 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.34
SWAP70-203ENST00000524817 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.34
SWAP70-203ENST00000524817 WNK3Q9BYP7 1800 aa17.2■□□□□ 0.34
SWAP70-203ENST00000524817 DLG5Q8TDM6 1919 aa17.2■□□□□ 0.34
SWAP70-203ENST00000524817 DCAF5Q96JK2 942 aa17.2■□□□□ 0.34
SWAP70-203ENST00000524817 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
SWAP70-203ENST00000524817 FAM196AQ6ZSG2 479 aa17.19■□□□□ 0.34
SWAP70-203ENST00000524817 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
SWAP70-203ENST00000524817 KRT24Q2M2I5 525 aa17.19■□□□□ 0.34
SWAP70-203ENST00000524817 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
SWAP70-203ENST00000524817 APBA3O96018 575 aa17.18■□□□□ 0.34
SWAP70-203ENST00000524817 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
SWAP70-203ENST00000524817 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
SWAP70-203ENST00000524817 GOLGB1Q14789 3259 aaKnown RBP17.17■□□□□ 0.34
SWAP70-203ENST00000524817 EN1Q05925 392 aaPredicted RBP17.17■□□□□ 0.34
SWAP70-203ENST00000524817 PRAMEF22A3QJZ6 481 aa17.16■□□□□ 0.34
SWAP70-203ENST00000524817 SMIM5Q71RC9 77 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms