RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 FOXO3O43524 673 aa12.39□□□□□ -0.43
CTSC-203ENST00000524463 CCDC181Q5TID7 509 aa12.39□□□□□ -0.43
CTSC-203ENST00000524463 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
CTSC-203ENST00000524463 ZNHIT6Q9NWK9 470 aaKnown RBP12.39□□□□□ -0.43
CTSC-203ENST00000524463 GUCY1B3Q02153 619 aa12.39□□□□□ -0.43
CTSC-203ENST00000524463 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
CTSC-203ENST00000524463 PDRG1Q9NUG6 133 aa12.39□□□□□ -0.43
CTSC-203ENST00000524463 FYCO1Q9BQS8 1478 aa12.39□□□□□ -0.43
CTSC-203ENST00000524463 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 EXOC6BQ9Y2D4 811 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 ZSCAN25Q6NSZ9 544 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 RRBP1Q9P2E9 1410 aaKnown RBP12.38□□□□□ -0.43
CTSC-203ENST00000524463 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
CTSC-203ENST00000524463 DNA2P51530 1060 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 CAMK4Q16566 473 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 LARP1BQ659C4 914 aaKnown RBP12.38□□□□□ -0.43
CTSC-203ENST00000524463 TNMDQ9H2S6 317 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 H0YHG0 523 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 CCDC144CPQ8IYA2 1237 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 VAT1LQ9HCJ6 419 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 NOL7Q9UMY1 257 aaKnown RBP12.38□□□□□ -0.43
CTSC-203ENST00000524463 TNNT1P13805 278 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 TAF3Q5VWG9 929 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 ACBD3Q9H3P7 528 aa12.38□□□□□ -0.43
CTSC-203ENST00000524463 RANBP6O60518 1105 aaKnown RBP12.37□□□□□ -0.43
CTSC-203ENST00000524463 CAVIN4Q5BKX8 364 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 TRMT112Q9UI30 125 aaKnown RBP12.37□□□□□ -0.43
CTSC-203ENST00000524463 MYO6Q9UM54 1294 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 GNAT3A8MTJ3 354 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 STIM1Q13586 685 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 RAB11FIP4Q86YS3 637 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 TMX1Q9H3N1 280 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 FGD6Q6ZV73 1430 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 NUDT16Q96DE0 195 aaKnown RBP12.37□□□□□ -0.43
CTSC-203ENST00000524463 ZBTB3Q9H5J0 574 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 FAM43AQ8N2R8 423 aa12.37□□□□□ -0.43
CTSC-203ENST00000524463 SEC63Q9UGP8 760 aaKnown RBP12.36□□□□□ -0.43
CTSC-203ENST00000524463 F8W031 263 aaPredicted RBP12.36□□□□□ -0.43
CTSC-203ENST00000524463 TSPYL1Q9H0U9 437 aa12.36□□□□□ -0.43
CTSC-203ENST00000524463 CHRNA2Q15822 529 aa12.36□□□□□ -0.43
CTSC-203ENST00000524463 CASTP20810 708 aaKnown RBP12.36□□□□□ -0.43
CTSC-203ENST00000524463 RBM10P98175 930 aaKnown RBP12.36□□□□□ -0.43
CTSC-203ENST00000524463 PNISRQ8TF01 805 aaKnown RBP12.35□□□□□ -0.43
CTSC-203ENST00000524463 ZNF692Q9BU19 519 aaPredicted RBP12.35□□□□□ -0.43
CTSC-203ENST00000524463 CCDC8Q9H0W5 538 aaPredicted RBP12.35□□□□□ -0.43
CTSC-203ENST00000524463 CCDC39Q9UFE4 941 aa12.35□□□□□ -0.43
CTSC-203ENST00000524463 TRAK2O60296 914 aa12.35□□□□□ -0.43
CTSC-203ENST00000524463 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
CTSC-203ENST00000524463 ZNF652Q9Y2D9 606 aa12.35□□□□□ -0.43
CTSC-203ENST00000524463 F6X3S4 739 aa12.35□□□□□ -0.43
CTSC-203ENST00000524463 BLOC1S2Q6QNY1 142 aa12.35□□□□□ -0.43
CTSC-203ENST00000524463 CEP57L1Q8IYX8 460 aa12.35□□□□□ -0.43
CTSC-203ENST00000524463 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
CTSC-203ENST00000524463 KLHL10Q6JEL2 608 aa12.34□□□□□ -0.43
CTSC-203ENST00000524463 IGF1RP08069 1367 aa12.34□□□□□ -0.43
CTSC-203ENST00000524463 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
CTSC-203ENST00000524463 PODXL2Q9NZ53 605 aa12.34□□□□□ -0.43
CTSC-203ENST00000524463 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
CTSC-203ENST00000524463 SPATA32Q96LK8 384 aa12.34□□□□□ -0.43
CTSC-203ENST00000524463 FEZ1Q99689 392 aa12.34□□□□□ -0.43
CTSC-203ENST00000524463 NCOA2Q15596 1464 aa12.33□□□□□ -0.43
CTSC-203ENST00000524463 IMMTQ16891 758 aaKnown RBP12.33□□□□□ -0.44
CTSC-203ENST00000524463 NME9Q86XW9 330 aa12.33□□□□□ -0.44
CTSC-203ENST00000524463 CT47B1P0C2W7 299 aaPredicted RBP12.33□□□□□ -0.44
CTSC-203ENST00000524463 ATP5J2-PTCD1G3V325 749 aa12.33□□□□□ -0.44
CTSC-203ENST00000524463 EIF5P55010 431 aaKnown RBP12.33□□□□□ -0.44
CTSC-203ENST00000524463 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
CTSC-203ENST00000524463 WDHD1O75717 1129 aaPredicted RBP12.33□□□□□ -0.44
CTSC-203ENST00000524463 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
CTSC-203ENST00000524463 DUSP27Q5VZP5 1158 aa12.33□□□□□ -0.44
CTSC-203ENST00000524463 SPTY2D1Q68D10 685 aaPredicted RBP12.33□□□□□ -0.44
CTSC-203ENST00000524463 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.33□□□□□ -0.44
CTSC-203ENST00000524463 JMYQ8N9B5 988 aa12.33□□□□□ -0.44
CTSC-203ENST00000524463 ERLIN2O94905 339 aa12.32□□□□□ -0.44
CTSC-203ENST00000524463 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
CTSC-203ENST00000524463 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
CTSC-203ENST00000524463 TNIP1Q15025 636 aa12.32□□□□□ -0.44
CTSC-203ENST00000524463 ZNF444Q8N0Y2 327 aaPredicted RBP12.32□□□□□ -0.44
CTSC-203ENST00000524463 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
CTSC-203ENST00000524463 PPP4R3AQ6IN85 833 aa12.32□□□□□ -0.44
CTSC-203ENST00000524463 MACROD2A1Z1Q3 448 aa12.31□□□□□ -0.44
CTSC-203ENST00000524463 IFIT1P09914 478 aaKnown RBP12.31□□□□□ -0.44
CTSC-203ENST00000524463 PDCP20941 246 aa12.31□□□□□ -0.44
CTSC-203ENST00000524463 RSPH6AQ9H0K4 717 aa12.31□□□□□ -0.44
CTSC-203ENST00000524463 SNRKQ9NRH2 765 aa12.31□□□□□ -0.44
CTSC-203ENST00000524463 CFTRP13569 1480 aa12.31□□□□□ -0.44
CTSC-203ENST00000524463 FBXO31Q5XUX0 539 aaPredicted RBP12.31□□□□□ -0.44
CTSC-203ENST00000524463 CCDC83Q8IWF9 413 aa12.31□□□□□ -0.44
CTSC-203ENST00000524463 SYNJ2O15056 1496 aa12.31□□□□□ -0.44
CTSC-203ENST00000524463 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
CTSC-203ENST00000524463 CHD1LQ86WJ1 897 aa12.31□□□□□ -0.44
CTSC-203ENST00000524463 PIP4K2AP48426 406 aaPredicted RBP12.31□□□□□ -0.44
CTSC-203ENST00000524463 SKAP1Q86WV1 359 aa12.31□□□□□ -0.44
CTSC-203ENST00000524463 IQSEC3Q9UPP2 1182 aaPredicted RBP12.31□□□□□ -0.44
CTSC-203ENST00000524463 RFC4P35249 363 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 RABEP1Q15276 862 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms