RNA–Protein interactions for RNA: ENST00000524112.1

CSGALNACT1-215, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-215ENST00000524112 KLHL34Q8N239 644 aa12.46□□□□□ -0.41
CSGALNACT1-215ENST00000524112 DCAF11Q8TEB1 546 aa12.46□□□□□ -0.41
CSGALNACT1-215ENST00000524112 ERBB3P21860 1342 aa12.45□□□□□ -0.42
CSGALNACT1-215ENST00000524112 KIF3CO14782 793 aa12.45□□□□□ -0.42
CSGALNACT1-215ENST00000524112 NLGN2Q8NFZ4 835 aa12.45□□□□□ -0.42
CSGALNACT1-215ENST00000524112 RBM46Q8TBY0 533 aaKnown RBP12.45□□□□□ -0.42
CSGALNACT1-215ENST00000524112 LRRC4BQ9NT99 713 aa12.45□□□□□ -0.42
CSGALNACT1-215ENST00000524112 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
CSGALNACT1-215ENST00000524112 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
CSGALNACT1-215ENST00000524112 ANKRD36BQ8N2N9 1353 aa12.44□□□□□ -0.42
CSGALNACT1-215ENST00000524112 NFAT5O94916 1531 aa12.44□□□□□ -0.42
CSGALNACT1-215ENST00000524112 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
CSGALNACT1-215ENST00000524112 PLEKHG2Q9H7P9 1386 aa12.43□□□□□ -0.42
CSGALNACT1-215ENST00000524112 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
CSGALNACT1-215ENST00000524112 CGNL1Q0VF96 1302 aa12.43□□□□□ -0.42
CSGALNACT1-215ENST00000524112 CENPJQ9HC77 1338 aaPredicted RBP12.43□□□□□ -0.42
CSGALNACT1-215ENST00000524112 WDR90Q96KV7 1748 aa12.43□□□□□ -0.42
CSGALNACT1-215ENST00000524112 SLC34A2O95436 690 aa12.43□□□□□ -0.42
CSGALNACT1-215ENST00000524112 KLRG1Q96E93 195 aa12.43□□□□□ -0.42
CSGALNACT1-215ENST00000524112 TNS4Q8IZW8 715 aa12.42□□□□□ -0.42
CSGALNACT1-215ENST00000524112 USP31Q70CQ4 1352 aa12.42□□□□□ -0.42
CSGALNACT1-215ENST00000524112 EVC2Q86UK5 1308 aa12.41□□□□□ -0.42
CSGALNACT1-215ENST00000524112 TTC21BQ7Z4L5 1316 aa12.39□□□□□ -0.43
CSGALNACT1-215ENST00000524112 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
CSGALNACT1-215ENST00000524112 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
CSGALNACT1-215ENST00000524112 CABP1Q9NZU7 370 aa12.39□□□□□ -0.43
CSGALNACT1-215ENST00000524112 USP47Q96K76 1375 aa12.39□□□□□ -0.43
CSGALNACT1-215ENST00000524112 C16orf71Q8IYS4 520 aaPredicted RBP12.38□□□□□ -0.43
CSGALNACT1-215ENST00000524112 NLRP2Q9NX02 1062 aa12.38□□□□□ -0.43
CSGALNACT1-215ENST00000524112 CCNL1Q9UK58 526 aaPredicted RBP12.38□□□□□ -0.43
CSGALNACT1-215ENST00000524112 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
CSGALNACT1-215ENST00000524112 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
CSGALNACT1-215ENST00000524112 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
CSGALNACT1-215ENST00000524112 TGFB2P61812 414 aa12.36□□□□□ -0.43
CSGALNACT1-215ENST00000524112 C5P01031 1676 aa12.35□□□□□ -0.43
CSGALNACT1-215ENST00000524112 NSD2O96028 1365 aa12.35□□□□□ -0.43
CSGALNACT1-215ENST00000524112 POLA2Q14181 598 aa12.35□□□□□ -0.43
CSGALNACT1-215ENST00000524112 COL13A1Q5TAT6 717 aaPredicted RBP12.35□□□□□ -0.43
CSGALNACT1-215ENST00000524112 COL23A1Q86Y22 540 aaPredicted RBP12.35□□□□□ -0.43
CSGALNACT1-215ENST00000524112 LTN1O94822 1766 aa12.35□□□□□ -0.43
CSGALNACT1-215ENST00000524112 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
CSGALNACT1-215ENST00000524112 ZNF526Q8TF50 670 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-215ENST00000524112 SMARCC1Q92922 1105 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-215ENST00000524112 KIF13BQ9NQT8 1826 aa12.34□□□□□ -0.43
CSGALNACT1-215ENST00000524112 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
CSGALNACT1-215ENST00000524112 SSFA2P28290 1259 aa12.33□□□□□ -0.44
CSGALNACT1-215ENST00000524112 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
CSGALNACT1-215ENST00000524112 CABP2Q9NPB3 220 aa12.33□□□□□ -0.44
CSGALNACT1-215ENST00000524112 DOT1LQ8TEK3 1739 aa12.33□□□□□ -0.44
CSGALNACT1-215ENST00000524112 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
CSGALNACT1-215ENST00000524112 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-215ENST00000524112 KTN1Q86UP2 1357 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-215ENST00000524112 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
CSGALNACT1-215ENST00000524112 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
CSGALNACT1-215ENST00000524112 WWC3Q9ULE0 1092 aa12.32□□□□□ -0.44
CSGALNACT1-215ENST00000524112 PXDNLA1KZ92 1463 aa12.32□□□□□ -0.44
CSGALNACT1-215ENST00000524112 SBNO2Q9Y2G9 1366 aa12.31□□□□□ -0.44
CSGALNACT1-215ENST00000524112 PRIM1P49642 420 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-215ENST00000524112 PCNTO95613 3336 aa12.31□□□□□ -0.44
CSGALNACT1-215ENST00000524112 ZCRB1Q8TBF4 217 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT1-215ENST00000524112 IP6K1Q92551 441 aa12.29□□□□□ -0.44
CSGALNACT1-215ENST00000524112 SYTL4Q96C24 671 aaPredicted RBP12.29□□□□□ -0.44
CSGALNACT1-215ENST00000524112 AK7Q96M32 723 aa12.29□□□□□ -0.44
CSGALNACT1-215ENST00000524112 PUS7Q96PZ0 661 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT1-215ENST00000524112 ARFGEF1Q9Y6D6 1849 aa12.29□□□□□ -0.44
CSGALNACT1-215ENST00000524112 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
CSGALNACT1-215ENST00000524112 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
CSGALNACT1-215ENST00000524112 DDX54Q8TDD1 881 aaKnown RBP12.28□□□□□ -0.44
CSGALNACT1-215ENST00000524112 RTL1A6NKG5 1358 aa12.28□□□□□ -0.44
CSGALNACT1-215ENST00000524112 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
CSGALNACT1-215ENST00000524112 EDC4Q6P2E9 1401 aaKnown RBP12.28□□□□□ -0.44
CSGALNACT1-215ENST00000524112 NLGN1Q8N2Q7 840 aa12.26□□□□□ -0.45
CSGALNACT1-215ENST00000524112 PRDM10Q9NQV6 1147 aa12.26□□□□□ -0.45
CSGALNACT1-215ENST00000524112 PCDH11XQ9BZA7 1347 aa12.26□□□□□ -0.45
CSGALNACT1-215ENST00000524112 PCDH11YQ9BZA8 1340 aa12.26□□□□□ -0.45
CSGALNACT1-215ENST00000524112 HDGFL2Q7Z4V5 671 aaPredicted RBP12.25□□□□□ -0.45
CSGALNACT1-215ENST00000524112 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
CSGALNACT1-215ENST00000524112 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
CSGALNACT1-215ENST00000524112 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
CSGALNACT1-215ENST00000524112 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
CSGALNACT1-215ENST00000524112 SMG6Q86US8 1419 aaKnown RBP12.25□□□□□ -0.45
CSGALNACT1-215ENST00000524112 BRCA1P38398 1863 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-215ENST00000524112 POTEHQ6S545 545 aa12.24□□□□□ -0.45
CSGALNACT1-215ENST00000524112 PKD1L3Q7Z443 1732 aa12.24□□□□□ -0.45
CSGALNACT1-215ENST00000524112 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
CSGALNACT1-215ENST00000524112 ZNF831Q5JPB2 1677 aa12.23□□□□□ -0.45
CSGALNACT1-215ENST00000524112 CD163L1Q9NR16 1453 aa12.23□□□□□ -0.45
CSGALNACT1-215ENST00000524112 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
CSGALNACT1-215ENST00000524112 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
CSGALNACT1-215ENST00000524112 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
CSGALNACT1-215ENST00000524112 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
CSGALNACT1-215ENST00000524112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-215ENST00000524112 SOX12O15370 315 aa12.22□□□□□ -0.45
CSGALNACT1-215ENST00000524112 HSPA1AP0DMV8 641 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-215ENST00000524112 HSPA1BP0DMV9 641 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-215ENST00000524112 NMRK2Q9NPI5 230 aa12.22□□□□□ -0.45
CSGALNACT1-215ENST00000524112 PPARGC1BQ86YN6 1023 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-215ENST00000524112 VEGFAP15692 232 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-215ENST00000524112 NBPF1Q3BBV0 1214 aa12.2□□□□□ -0.46
CSGALNACT1-215ENST00000524112 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms