RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 IL13P35225 146 aa16.91■□□□□ 0.3
CCNC-216ENST00000523961 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
CCNC-216ENST00000523961 RGPD1P0DJD0 1748 aa16.9■□□□□ 0.3
CCNC-216ENST00000523961 DIAPH1O60610 1272 aaKnown RBP16.89■□□□□ 0.29
CCNC-216ENST00000523961 PPP2R1AP30153 589 aa16.89■□□□□ 0.29
CCNC-216ENST00000523961 DEFB132Q7Z7B7 95 aa16.89■□□□□ 0.29
CCNC-216ENST00000523961 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
CCNC-216ENST00000523961 APBA3O96018 575 aa16.88■□□□□ 0.29
CCNC-216ENST00000523961 CFAP53Q96M91 514 aa16.88■□□□□ 0.29
CCNC-216ENST00000523961 BCL11BQ9C0K0 894 aaPredicted RBP16.88■□□□□ 0.29
CCNC-216ENST00000523961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■□□□□ 10.7
CCNC-216ENST00000523961 SPG7Q9UQ90 795 aa16.88■□□□□ 0.29
CCNC-216ENST00000523961 PCDH11XQ9BZA7 1347 aa16.88■□□□□ 0.29
CCNC-216ENST00000523961 PCDH11YQ9BZA8 1340 aa16.88■□□□□ 0.29
CCNC-216ENST00000523961 PLEKHG2Q9H7P9 1386 aa16.88■□□□□ 0.29
CCNC-216ENST00000523961 PARD3Q8TEW0 1356 aa16.87■□□□□ 0.29
CCNC-216ENST00000523961 TNS1Q9HBL0 1735 aaKnown RBP16.86■□□□□ 0.29
CCNC-216ENST00000523961 EN1Q05925 392 aaPredicted RBP16.85■□□□□ 0.29
CCNC-216ENST00000523961 RALBP1Q15311 655 aa16.85■□□□□ 0.29
CCNC-216ENST00000523961 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
CCNC-216ENST00000523961 SBF2Q86WG5 1849 aa16.84■□□□□ 0.29
CCNC-216ENST00000523961 AEBP1Q8IUX7 1158 aa16.84■□□□□ 0.29
CCNC-216ENST00000523961 ACSBG1Q96GR2 724 aa16.84■□□□□ 0.29
CCNC-216ENST00000523961 KDRP35968 1356 aa16.84■□□□□ 0.29
CCNC-216ENST00000523961 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
CCNC-216ENST00000523961 CYP27B1O15528 508 aa16.83■□□□□ 0.28
CCNC-216ENST00000523961 KCNQ2O43526 872 aa16.83■□□□□ 0.28
CCNC-216ENST00000523961 PLEKHO1Q53GL0 409 aaPredicted RBP16.83■□□□□ 0.28
CCNC-216ENST00000523961 PKD1L3Q7Z443 1732 aa16.83■□□□□ 0.28
CCNC-216ENST00000523961 SHANK3Q9BYB0 1731 aa16.83■□□□□ 0.28
CCNC-216ENST00000523961 PLSCR1O15162 318 aa16.82■□□□□ 0.28
CCNC-216ENST00000523961 AMOTQ4VCS5 1084 aa16.82■□□□□ 0.28
CCNC-216ENST00000523961 PTF1AQ7RTS3 328 aa16.82■□□□□ 0.28
CCNC-216ENST00000523961 CAMKK2Q96RR4 588 aa16.82■□□□□ 0.28
CCNC-216ENST00000523961 NUDCQ9Y266 331 aa16.82■□□□□ 0.28
CCNC-216ENST00000523961 U2SURPO15042 1029 aaKnown RBP16.81■□□□□ 0.28
CCNC-216ENST00000523961 EZH2Q15910 746 aaKnown RBP16.81■□□□□ 0.28
CCNC-216ENST00000523961 IFNL2Q8IZJ0 200 aa16.81■□□□□ 0.28
CCNC-216ENST00000523961 NHSQ6T4R5 1651 aa16.81■□□□□ 0.28
CCNC-216ENST00000523961 HMOX1P09601 288 aa16.8■□□□□ 0.28
CCNC-216ENST00000523961 NKX1-1Q15270 411 aaPredicted RBP16.8■□□□□ 0.28
CCNC-216ENST00000523961 KAT6BQ8WYB5 2073 aa16.79■□□□□ 0.28
CCNC-216ENST00000523961 PHKG2P15735 406 aa16.79■□□□□ 0.28
CCNC-216ENST00000523961 PRIM1P49642 420 aaKnown RBP16.79■□□□□ 0.28
CCNC-216ENST00000523961 SYTL4Q96C24 671 aaPredicted RBP16.79■□□□□ 0.28
CCNC-216ENST00000523961 ZNF530Q6P9A1 599 aaPredicted RBP16.78■□□□□ 0.28
CCNC-216ENST00000523961 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.28
CCNC-216ENST00000523961 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.28
CCNC-216ENST00000523961 C1orf141Q5JVX7 400 aa16.76■□□□□ 0.27
CCNC-216ENST00000523961 DOT1LQ8TEK3 1739 aa16.76■□□□□ 0.27
CCNC-216ENST00000523961 U2AF1L5P0DN76 240 aaPredicted RBP16.75■□□□□ 0.27
CCNC-216ENST00000523961 U2AF1Q01081 240 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCNC-216ENST00000523961 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
CCNC-216ENST00000523961 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
CCNC-216ENST00000523961 RGPD3A6NKT7 1758 aaPredicted RBP16.74■□□□□ 0.27
CCNC-216ENST00000523961 RGPD4Q7Z3J3 1758 aa16.74■□□□□ 0.27
CCNC-216ENST00000523961 DCAF5Q96JK2 942 aa16.74■□□□□ 0.27
CCNC-216ENST00000523961 BTAF1O14981 1849 aa16.73■□□□□ 0.27
CCNC-216ENST00000523961 TXNRD1Q16881 649 aa16.73■□□□□ 0.27
CCNC-216ENST00000523961 FCHSD2O94868 740 aa16.72■□□□□ 0.27
CCNC-216ENST00000523961 AKAP4Q5JQC9 854 aa16.72■□□□□ 0.27
CCNC-216ENST00000523961 MPRIPQ6WCQ1 1025 aa16.72■□□□□ 0.27
CCNC-216ENST00000523961 PROM2Q8N271 834 aa16.72■□□□□ 0.27
CCNC-216ENST00000523961 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
CCNC-216ENST00000523961 RREB1Q92766 1687 aa16.72■□□□□ 0.27
CCNC-216ENST00000523961 ERVV-2B6SEH9 535 aa16.71■□□□□ 0.27
CCNC-216ENST00000523961 PRKAR2BP31323 418 aa16.71■□□□□ 0.27
CCNC-216ENST00000523961 MTHFSDQ2M296 383 aaKnown RBP16.71■□□□□ 0.27
CCNC-216ENST00000523961 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
CCNC-216ENST00000523961 TMOD3Q9NYL9 352 aa16.71■□□□□ 0.27
CCNC-216ENST00000523961 GAS2L2Q8NHY3 880 aa16.7■□□□□ 0.26
CCNC-216ENST00000523961 PIGBQ92521 554 aa16.7■□□□□ 0.26
CCNC-216ENST00000523961 TOGARAM1Q9Y4F4 1720 aa16.7■□□□□ 0.26
CCNC-216ENST00000523961 SLC27A3Q5K4L6 730 aa16.69■□□□□ 0.26
CCNC-216ENST00000523961 SMARCC1Q92922 1105 aaPredicted RBP16.69■□□□□ 0.26
CCNC-216ENST00000523961 KDM6AO15550 1401 aaPredicted RBP16.69■□□□□ 0.26
CCNC-216ENST00000523961 NUP188Q5SRE5 1749 aa16.68■□□□□ 0.26
CCNC-216ENST00000523961 CABP4P57796 275 aa16.68■□□□□ 0.26
CCNC-216ENST00000523961 NEFMP07197 916 aa16.67■□□□□ 0.26
CCNC-216ENST00000523961 PNNQ9H307 717 aaKnown RBP16.67■□□□□ 0.26
CCNC-216ENST00000523961 ITGB4P16144 1822 aa16.67■□□□□ 0.26
CCNC-216ENST00000523961 PALLDQ8WX93 1383 aa16.66■□□□□ 0.26
CCNC-216ENST00000523961 ANP32CO43423 234 aa16.66■□□□□ 0.26
CCNC-216ENST00000523961 R3HDM1Q15032 1099 aaKnown RBP16.66■□□□□ 0.26
CCNC-216ENST00000523961 PHACTR3Q96KR7 559 aa16.66■□□□□ 0.26
CCNC-216ENST00000523961 PSDA5PKW4 1024 aaPredicted RBP16.65■□□□□ 0.26
CCNC-216ENST00000523961 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
CCNC-216ENST00000523961 HMGB2P26583 209 aaKnown RBP16.65■□□□□ 0.26
CCNC-216ENST00000523961 LRRC4BQ9NT99 713 aa16.65■□□□□ 0.26
CCNC-216ENST00000523961 CCNL1Q9UK58 526 aaPredicted RBP16.65■□□□□ 0.26
CCNC-216ENST00000523961 MAP3K5Q99683 1374 aa16.64■□□□□ 0.26
CCNC-216ENST00000523961 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
CCNC-216ENST00000523961 LGR6Q9HBX8 967 aa16.64■□□□□ 0.25
CCNC-216ENST00000523961 ANO8Q9HCE9 1232 aaPredicted RBP16.64■□□□□ 0.25
CCNC-216ENST00000523961 STK32BQ9NY57 414 aa16.64■□□□□ 0.25
CCNC-216ENST00000523961 LY75O60449 1722 aa16.63■□□□□ 0.25
CCNC-216ENST00000523961 NFATC2IPQ8NCF5 419 aa16.63■□□□□ 0.25
CCNC-216ENST00000523961 ASAP1Q9ULH1 1129 aa16.63■□□□□ 0.25
CCNC-216ENST00000523961 SCN11AQ9UI33 1791 aa16.62■□□□□ 0.25
CCNC-216ENST00000523961 WDR43Q15061 677 aaKnown RBP eCLIP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms