RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
PTPN12-216ENST00000523952 NLGN2Q8NFZ4 835 aa13.38□□□□□ -0.27
PTPN12-216ENST00000523952 SYTL4Q96C24 671 aaPredicted RBP13.38□□□□□ -0.27
PTPN12-216ENST00000523952 GPBP1L1Q9HC44 474 aaPredicted RBP13.37□□□□□ -0.27
PTPN12-216ENST00000523952 LRRC4BQ9NT99 713 aa13.37□□□□□ -0.27
PTPN12-216ENST00000523952 ATP10DQ9P241 1426 aa13.37□□□□□ -0.27
PTPN12-216ENST00000523952 ERBB3P21860 1342 aa13.37□□□□□ -0.27
PTPN12-216ENST00000523952 PNPLA7Q6ZV29 1317 aa13.37□□□□□ -0.27
PTPN12-216ENST00000523952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTPN12-216ENST00000523952 DDX54Q8TDD1 881 aaKnown RBP13.36□□□□□ -0.27
PTPN12-216ENST00000523952 AKT1S1Q96B36 256 aa13.36□□□□□ -0.27
PTPN12-216ENST00000523952 ANKRD24Q8TF21 1146 aa13.35□□□□□ -0.27
PTPN12-216ENST00000523952 ZNF526Q8TF50 670 aaPredicted RBP13.34□□□□□ -0.27
PTPN12-216ENST00000523952 ABCB7O75027 752 aa13.33□□□□□ -0.28
PTPN12-216ENST00000523952 YBX3P16989 372 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTPN12-216ENST00000523952 KCNQ4P56696 695 aa13.33□□□□□ -0.28
PTPN12-216ENST00000523952 HSPA6P17066 643 aa13.32□□□□□ -0.28
PTPN12-216ENST00000523952 ITGB4P16144 1822 aa13.32□□□□□ -0.28
PTPN12-216ENST00000523952 CCNL1Q9UK58 526 aaPredicted RBP13.31□□□□□ -0.28
PTPN12-216ENST00000523952 PRIM1P49642 420 aaKnown RBP13.3□□□□□ -0.28
PTPN12-216ENST00000523952 MSL1Q68DK7 614 aa13.3□□□□□ -0.28
PTPN12-216ENST00000523952 LTV1Q96GA3 475 aaPredicted RBP13.3□□□□□ -0.28
PTPN12-216ENST00000523952 ANKRD36BQ8N2N9 1353 aa13.3□□□□□ -0.28
PTPN12-216ENST00000523952 HDGFL2Q7Z4V5 671 aaPredicted RBP13.29□□□□□ -0.28
PTPN12-216ENST00000523952 NME9Q86XW9 330 aa13.29□□□□□ -0.28
PTPN12-216ENST00000523952 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
PTPN12-216ENST00000523952 ROCK2O75116 1388 aaKnown RBP13.29□□□□□ -0.28
PTPN12-216ENST00000523952 USP31Q70CQ4 1352 aa13.29□□□□□ -0.28
PTPN12-216ENST00000523952 USP47Q96K76 1375 aa13.29□□□□□ -0.28
PTPN12-216ENST00000523952 UBR3Q6ZT12 1888 aa13.28□□□□□ -0.28
PTPN12-216ENST00000523952 HMGB2P26583 209 aaKnown RBP13.28□□□□□ -0.28
PTPN12-216ENST00000523952 COL23A1Q86Y22 540 aaPredicted RBP13.27□□□□□ -0.29
PTPN12-216ENST00000523952 CD2APQ9Y5K6 639 aa13.27□□□□□ -0.29
PTPN12-216ENST00000523952 C4BP0C0L5 1744 aa13.26□□□□□ -0.29
PTPN12-216ENST00000523952 WDR90Q96KV7 1748 aa13.26□□□□□ -0.29
PTPN12-216ENST00000523952 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
PTPN12-216ENST00000523952 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
PTPN12-216ENST00000523952 ZCRB1Q8TBF4 217 aaKnown RBP13.25□□□□□ -0.29
PTPN12-216ENST00000523952 EDC4Q6P2E9 1401 aaKnown RBP13.24□□□□□ -0.29
PTPN12-216ENST00000523952 IP6K1Q92551 441 aa13.24□□□□□ -0.29
PTPN12-216ENST00000523952 TERF2IPQ9NYB0 399 aa13.24□□□□□ -0.29
PTPN12-216ENST00000523952 ADCY9O60503 1353 aa13.23□□□□□ -0.29
PTPN12-216ENST00000523952 AMPHP49418 695 aa13.23□□□□□ -0.29
PTPN12-216ENST00000523952 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
PTPN12-216ENST00000523952 WWC3Q9ULE0 1092 aa13.23□□□□□ -0.29
PTPN12-216ENST00000523952 NSD2O96028 1365 aa13.22□□□□□ -0.29
PTPN12-216ENST00000523952 SBNO2Q9Y2G9 1366 aa13.22□□□□□ -0.29
PTPN12-216ENST00000523952 APLP1P51693 650 aa13.22□□□□□ -0.29
PTPN12-216ENST00000523952 L3MBTL2Q969R5 705 aa13.22□□□□□ -0.29
PTPN12-216ENST00000523952 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.29
PTPN12-216ENST00000523952 KIF20BQ96Q89 1820 aa13.21□□□□□ -0.29
PTPN12-216ENST00000523952 KIF13BQ9NQT8 1826 aa13.21□□□□□ -0.29
PTPN12-216ENST00000523952 AK7Q96M32 723 aa13.21□□□□□ -0.29
PTPN12-216ENST00000523952 TOGARAM1Q9Y4F4 1720 aa13.21□□□□□ -0.3
PTPN12-216ENST00000523952 CD163L1Q9NR16 1453 aa13.21□□□□□ -0.3
PTPN12-216ENST00000523952 MEGF6O75095 1541 aa13.2□□□□□ -0.3
PTPN12-216ENST00000523952 SMG6Q86US8 1419 aaKnown RBP13.2□□□□□ -0.3
PTPN12-216ENST00000523952 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
PTPN12-216ENST00000523952 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
PTPN12-216ENST00000523952 COG3Q96JB2 828 aa13.19□□□□□ -0.3
PTPN12-216ENST00000523952 ARFGEF1Q9Y6D6 1849 aa13.18□□□□□ -0.3
PTPN12-216ENST00000523952 PHF14O94880 888 aa13.18□□□□□ -0.3
PTPN12-216ENST00000523952 SLC12A5Q9H2X9 1139 aa13.18□□□□□ -0.3
PTPN12-216ENST00000523952 PKD1L3Q7Z443 1732 aa13.18□□□□□ -0.3
PTPN12-216ENST00000523952 BRCA1P38398 1863 aaKnown RBP13.18□□□□□ -0.3
PTPN12-216ENST00000523952 A0A1W2PP64 1363 aa13.18□□□□□ -0.3
PTPN12-216ENST00000523952 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
PTPN12-216ENST00000523952 CGNL1Q0VF96 1302 aa13.17□□□□□ -0.3
PTPN12-216ENST00000523952 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
PTPN12-216ENST00000523952 HOXC9P31274 260 aa13.17□□□□□ -0.3
PTPN12-216ENST00000523952 MPRIPQ6WCQ1 1025 aa13.17□□□□□ -0.3
PTPN12-216ENST00000523952 CICQ96RK0 1608 aaPredicted RBP13.17□□□□□ -0.3
PTPN12-216ENST00000523952 KIF3CO14782 793 aa13.16□□□□□ -0.3
PTPN12-216ENST00000523952 NEUROD1Q13562 356 aa13.16□□□□□ -0.3
PTPN12-216ENST00000523952 C16orf71Q8IYS4 520 aaPredicted RBP13.16□□□□□ -0.3
PTPN12-216ENST00000523952 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
PTPN12-216ENST00000523952 MAP3K19Q56UN5 1328 aa13.15□□□□□ -0.3
PTPN12-216ENST00000523952 PCDH11XQ9BZA7 1347 aa13.15□□□□□ -0.3
PTPN12-216ENST00000523952 PCDH11YQ9BZA8 1340 aa13.15□□□□□ -0.3
PTPN12-216ENST00000523952 CCDC88AQ3V6T2 1871 aa13.15□□□□□ -0.3
PTPN12-216ENST00000523952 TOMM70O94826 608 aa13.15□□□□□ -0.3
PTPN12-216ENST00000523952 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
PTPN12-216ENST00000523952 CARD11Q9BXL7 1154 aa13.15□□□□□ -0.3
PTPN12-216ENST00000523952 KIAA1551Q9HCM1 1747 aa13.15□□□□□ -0.3
PTPN12-216ENST00000523952 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
PTPN12-216ENST00000523952 RTL1A6NKG5 1358 aa13.14□□□□□ -0.31
PTPN12-216ENST00000523952 TNRC6CQ9HCJ0 1690 aaKnown RBP13.14□□□□□ -0.31
PTPN12-216ENST00000523952 SBF1O95248 1867 aa13.14□□□□□ -0.31
PTPN12-216ENST00000523952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
PTPN12-216ENST00000523952 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
PTPN12-216ENST00000523952 SIN3AQ96ST3 1273 aa13.12□□□□□ -0.31
PTPN12-216ENST00000523952 BCS1LQ9Y276 419 aa13.12□□□□□ -0.31
PTPN12-216ENST00000523952 SSFA2P28290 1259 aa13.11□□□□□ -0.31
PTPN12-216ENST00000523952 NBPF6Q5VWK0 638 aa13.11□□□□□ -0.31
PTPN12-216ENST00000523952 ARHGAP27Q6ZUM4 889 aa13.11□□□□□ -0.31
PTPN12-216ENST00000523952 NBPF4Q96M43 638 aa13.11□□□□□ -0.31
PTPN12-216ENST00000523952 FBLN1P23142 703 aa13.1□□□□□ -0.31
PTPN12-216ENST00000523952 RRS1Q15050 365 aaKnown RBP13.1□□□□□ -0.31
PTPN12-216ENST00000523952 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
PTPN12-216ENST00000523952 GNPATO15228 680 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms