RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 RGPD1P0DJD0 1748 aa21.75■■□□□ 1.07
TRAPPC9-214ENST00000523777 EP400Q96L91 3159 aa21.74■■□□□ 1.07
TRAPPC9-214ENST00000523777 FAM182BQ5T319 152 aa21.74■■□□□ 1.07
TRAPPC9-214ENST00000523777 SPG7Q9UQ90 795 aa21.73■■□□□ 1.07
TRAPPC9-214ENST00000523777 NUDCQ9Y266 331 aa21.72■■□□□ 1.07
TRAPPC9-214ENST00000523777 PCDH11XQ9BZA7 1347 aa21.72■■□□□ 1.07
TRAPPC9-214ENST00000523777 PCDH11YQ9BZA8 1340 aa21.72■■□□□ 1.07
TRAPPC9-214ENST00000523777 DDX54Q8TDD1 881 aaKnown RBP21.71■■□□□ 1.07
TRAPPC9-214ENST00000523777 BAG6P46379 1132 aa21.7■■□□□ 1.06
TRAPPC9-214ENST00000523777 KDRP35968 1356 aa21.7■■□□□ 1.06
TRAPPC9-214ENST00000523777 SBF2Q86WG5 1849 aa21.69■■□□□ 1.06
TRAPPC9-214ENST00000523777 TRIM37O94972 964 aa21.69■■□□□ 1.06
TRAPPC9-214ENST00000523777 SULT6B1Q6IMI4 303 aa21.69■■□□□ 1.06
TRAPPC9-214ENST00000523777 PKD1L3Q7Z443 1732 aa21.69■■□□□ 1.06
TRAPPC9-214ENST00000523777 AMOTQ4VCS5 1084 aa21.68■■□□□ 1.06
TRAPPC9-214ENST00000523777 BCL11BQ9C0K0 894 aaPredicted RBP21.68■■□□□ 1.06
TRAPPC9-214ENST00000523777 COL3A1P02461 1466 aaPredicted RBP21.68■■□□□ 1.06
TRAPPC9-214ENST00000523777 KAT6BQ8WYB5 2073 aa21.67■■□□□ 1.06
TRAPPC9-214ENST00000523777 MYBBP1AQ9BQG0 1328 aaKnown RBP21.67■■□□□ 1.06
TRAPPC9-214ENST00000523777 PLEKHO1Q53GL0 409 aaPredicted RBP21.67■■□□□ 1.06
TRAPPC9-214ENST00000523777 SHANK3Q9BYB0 1731 aa21.66■■□□□ 1.06
TRAPPC9-214ENST00000523777 U2SURPO15042 1029 aaKnown RBP21.65■■□□□ 1.06
TRAPPC9-214ENST00000523777 TNS1Q9HBL0 1735 aaKnown RBP21.65■■□□□ 1.06
TRAPPC9-214ENST00000523777 APBA3O96018 575 aa21.63■■□□□ 1.05
TRAPPC9-214ENST00000523777 IFNL2Q8IZJ0 200 aa21.63■■□□□ 1.05
TRAPPC9-214ENST00000523777 PRKRIP1Q9H875 184 aaPredicted RBP21.63■■□□□ 1.05
TRAPPC9-214ENST00000523777 HSP90AB1P08238 724 aaKnown RBP21.62■■□□□ 1.05
TRAPPC9-214ENST00000523777 AEBP1Q8IUX7 1158 aa21.62■■□□□ 1.05
TRAPPC9-214ENST00000523777 NHSQ6T4R5 1651 aa21.62■■□□□ 1.05
TRAPPC9-214ENST00000523777 CYP27B1O15528 508 aa21.61■■□□□ 1.05
TRAPPC9-214ENST00000523777 NKX1-1Q15270 411 aaPredicted RBP21.61■■□□□ 1.05
TRAPPC9-214ENST00000523777 PLSCR1O15162 318 aa21.6■■□□□ 1.05
TRAPPC9-214ENST00000523777 HMOX1P09601 288 aa21.6■■□□□ 1.05
TRAPPC9-214ENST00000523777 C1orf141Q5JVX7 400 aa21.59■■□□□ 1.05
TRAPPC9-214ENST00000523777 FCHSD2O94868 740 aa21.58■■□□□ 1.05
TRAPPC9-214ENST00000523777 U2AF1L5P0DN76 240 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC9-214ENST00000523777 PHKG2P15735 406 aa21.58■■□□□ 1.05
TRAPPC9-214ENST00000523777 U2AF1Q01081 240 aaKnown RBP eCLIP21.58■■□□□ 1.05
TRAPPC9-214ENST00000523777 DEFB132Q7Z7B7 95 aa21.58■■□□□ 1.05
TRAPPC9-214ENST00000523777 ACSBG1Q96GR2 724 aa21.58■■□□□ 1.05
TRAPPC9-214ENST00000523777 PNNQ9H307 717 aaKnown RBP21.58■■□□□ 1.05
TRAPPC9-214ENST00000523777 RGPD3A6NKT7 1758 aaPredicted RBP21.58■■□□□ 1.04
TRAPPC9-214ENST00000523777 RGPD4Q7Z3J3 1758 aa21.58■■□□□ 1.04
TRAPPC9-214ENST00000523777 ANP32CO43423 234 aa21.57■■□□□ 1.04
TRAPPC9-214ENST00000523777 ZNF530Q6P9A1 599 aaPredicted RBP21.57■■□□□ 1.04
TRAPPC9-214ENST00000523777 DOT1LQ8TEK3 1739 aa21.56■■□□□ 1.04
TRAPPC9-214ENST00000523777 NEFMP07197 916 aa21.56■■□□□ 1.04
TRAPPC9-214ENST00000523777 EN1Q05925 392 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC9-214ENST00000523777 KCNQ2O43526 872 aa21.55■■□□□ 1.04
TRAPPC9-214ENST00000523777 PRIM1P49642 420 aaKnown RBP21.55■■□□□ 1.04
TRAPPC9-214ENST00000523777 SYTL4Q96C24 671 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC9-214ENST00000523777 DCAF5Q96JK2 942 aa21.55■■□□□ 1.04
TRAPPC9-214ENST00000523777 CAMKK2Q96RR4 588 aa21.55■■□□□ 1.04
TRAPPC9-214ENST00000523777 AKAP4Q5JQC9 854 aa21.54■■□□□ 1.04
TRAPPC9-214ENST00000523777 GAS2L2Q8NHY3 880 aa21.54■■□□□ 1.04
TRAPPC9-214ENST00000523777 BTAF1O14981 1849 aa21.53■■□□□ 1.04
TRAPPC9-214ENST00000523777 HMGB2P26583 209 aaKnown RBP21.53■■□□□ 1.04
TRAPPC9-214ENST00000523777 RSPH6AQ9H0K4 717 aa21.53■■□□□ 1.04
TRAPPC9-214ENST00000523777 ERVV-2B6SEH9 535 aa21.52■■□□□ 1.04
TRAPPC9-214ENST00000523777 PRKAR2BP31323 418 aa21.51■■□□□ 1.03
TRAPPC9-214ENST00000523777 EZH2Q15910 746 aaKnown RBP21.51■■□□□ 1.03
TRAPPC9-214ENST00000523777 ITGB4P16144 1822 aa21.5■■□□□ 1.03
TRAPPC9-214ENST00000523777 MTHFSDQ2M296 383 aaKnown RBP21.49■■□□□ 1.03
TRAPPC9-214ENST00000523777 PTF1AQ7RTS3 328 aa21.49■■□□□ 1.03
TRAPPC9-214ENST00000523777 TMOD3Q9NYL9 352 aa21.49■■□□□ 1.03
TRAPPC9-214ENST00000523777 WDR43Q15061 677 aaKnown RBP eCLIP21.48■■□□□ 1.03
TRAPPC9-214ENST00000523777 MPRIPQ6WCQ1 1025 aa21.48■■□□□ 1.03
TRAPPC9-214ENST00000523777 SMARCC1Q92922 1105 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC9-214ENST00000523777 RREB1Q92766 1687 aa21.47■■□□□ 1.03
TRAPPC9-214ENST00000523777 TOGARAM1Q9Y4F4 1720 aa21.47■■□□□ 1.03
TRAPPC9-214ENST00000523777 SLC27A3Q5K4L6 730 aa21.46■■□□□ 1.03
TRAPPC9-214ENST00000523777 NBPF14Q5TI25 921 aa21.46■■□□□ 1.03
TRAPPC9-214ENST00000523777 SCN11AQ9UI33 1791 aa21.46■■□□□ 1.03
TRAPPC9-214ENST00000523777 GNAT3A8MTJ3 354 aa21.45■■□□□ 1.02
TRAPPC9-214ENST00000523777 CABP4P57796 275 aa21.45■■□□□ 1.02
TRAPPC9-214ENST00000523777 TXNRD1Q16881 649 aa21.45■■□□□ 1.02
TRAPPC9-214ENST00000523777 PIGBQ92521 554 aa21.44■■□□□ 1.02
TRAPPC9-214ENST00000523777 MAPK8IP3Q9UPT6 1336 aa21.44■■□□□ 1.02
TRAPPC9-214ENST00000523777 MAP3K5Q99683 1374 aa21.44■■□□□ 1.02
TRAPPC9-214ENST00000523777 KDM6AO15550 1401 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC9-214ENST00000523777 PHACTR3Q96KR7 559 aa21.43■■□□□ 1.02
TRAPPC9-214ENST00000523777 NUP188Q5SRE5 1749 aa21.42■■□□□ 1.02
TRAPPC9-214ENST00000523777 VIRMAQ69YN4 1812 aaKnown RBP21.41■■□□□ 1.02
TRAPPC9-214ENST00000523777 LY75O60449 1722 aa21.41■■□□□ 1.02
TRAPPC9-214ENST00000523777 RNMTO43148 476 aaKnown RBP21.41■■□□□ 1.02
TRAPPC9-214ENST00000523777 HTATSF1O43719 755 aaKnown RBP21.41■■□□□ 1.02
TRAPPC9-214ENST00000523777 RTF1Q92541 710 aaKnown RBP21.41■■□□□ 1.02
TRAPPC9-214ENST00000523777 PLEKHF1Q96S99 279 aa21.41■■□□□ 1.02
TRAPPC9-214ENST00000523777 PROM2Q8N271 834 aa21.4■■□□□ 1.02
TRAPPC9-214ENST00000523777 ADAMTS7Q9UKP4 1686 aa21.4■■□□□ 1.02
TRAPPC9-214ENST00000523777 PALLDQ8WX93 1383 aa21.39■■□□□ 1.02
TRAPPC9-214ENST00000523777 SLC52A2Q9HAB3 445 aa21.39■■□□□ 1.01
TRAPPC9-214ENST00000523777 NFATC2IPQ8NCF5 419 aa21.38■■□□□ 1.01
TRAPPC9-214ENST00000523777 TEFQ10587 303 aa21.37■■□□□ 1.01
TRAPPC9-214ENST00000523777 LGR6Q9HBX8 967 aa21.37■■□□□ 1.01
TRAPPC9-214ENST00000523777 CCNL1Q9UK58 526 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC9-214ENST00000523777 MRC1P22897 1456 aa21.37■■□□□ 1.01
TRAPPC9-214ENST00000523777 NFE2L2Q16236 605 aa21.36■■□□□ 1.01
TRAPPC9-214ENST00000523777 RUNDC1Q96C34 613 aa21.35■■□□□ 1.01
TRAPPC9-214ENST00000523777 MRS2Q9HD23 443 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms