RNA–Protein interactions for RNA: ENST00000523720.1

R3HCC1-209, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-209ENST00000523720 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
R3HCC1-209ENST00000523720 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
R3HCC1-209ENST00000523720 ACSBG1Q96GR2 724 aa16.26■□□□□ 0.19
R3HCC1-209ENST00000523720 EMILIN1Q9Y6C2 1016 aa16.26■□□□□ 0.19
R3HCC1-209ENST00000523720 NCAPD2Q15021 1401 aa16.26■□□□□ 0.19
R3HCC1-209ENST00000523720 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
R3HCC1-209ENST00000523720 DDX54Q8TDD1 881 aaKnown RBP16.25■□□□□ 0.19
R3HCC1-209ENST00000523720 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
R3HCC1-209ENST00000523720 TOGARAM1Q9Y4F4 1720 aa16.25■□□□□ 0.19
R3HCC1-209ENST00000523720 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
R3HCC1-209ENST00000523720 KCNQ2O43526 872 aa16.24■□□□□ 0.19
R3HCC1-209ENST00000523720 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
R3HCC1-209ENST00000523720 ZCRB1Q8TBF4 217 aaKnown RBP16.24■□□□□ 0.19
R3HCC1-209ENST00000523720 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
R3HCC1-209ENST00000523720 PANK3Q9H999 370 aa16.23■□□□□ 0.19
R3HCC1-209ENST00000523720 ITGB4P16144 1822 aa16.23■□□□□ 0.19
R3HCC1-209ENST00000523720 SRCAPQ6ZRS2 3230 aa16.23■□□□□ 0.19
R3HCC1-209ENST00000523720 PCDH11XQ9BZA7 1347 aa16.22■□□□□ 0.19
R3HCC1-209ENST00000523720 PCDH11YQ9BZA8 1340 aa16.22■□□□□ 0.19
R3HCC1-209ENST00000523720 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
R3HCC1-209ENST00000523720 ANO8Q9HCE9 1232 aaPredicted RBP16.22■□□□□ 0.19
R3HCC1-209ENST00000523720 TUBGCP6Q96RT7 1819 aa16.22■□□□□ 0.19
R3HCC1-209ENST00000523720 WASHC2AQ641Q2 1341 aa16.21■□□□□ 0.19
R3HCC1-209ENST00000523720 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
R3HCC1-209ENST00000523720 C5P01031 1676 aa16.2■□□□□ 0.18
R3HCC1-209ENST00000523720 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
R3HCC1-209ENST00000523720 PLEKHG2Q9H7P9 1386 aa16.19■□□□□ 0.18
R3HCC1-209ENST00000523720 PROM2Q8N271 834 aa16.19■□□□□ 0.18
R3HCC1-209ENST00000523720 SYTL4Q96C24 671 aaPredicted RBP16.19■□□□□ 0.18
R3HCC1-209ENST00000523720 POLKQ9UBT6 870 aa16.19■□□□□ 0.18
R3HCC1-209ENST00000523720 TNNT2P45379 298 aaPredicted RBP16.18■□□□□ 0.18
R3HCC1-209ENST00000523720 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
R3HCC1-209ENST00000523720 SPON1Q9HCB6 807 aa16.17■□□□□ 0.18
R3HCC1-209ENST00000523720 TAF1LQ8IZX4 1826 aa16.17■□□□□ 0.18
R3HCC1-209ENST00000523720 SLC27A3Q5K4L6 730 aa16.16■□□□□ 0.18
R3HCC1-209ENST00000523720 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
R3HCC1-209ENST00000523720 SLC15A2Q16348 729 aa16.15■□□□□ 0.18
R3HCC1-209ENST00000523720 MORC1Q86VD1 984 aa16.15■□□□□ 0.18
R3HCC1-209ENST00000523720 EIF4A2Q14240 407 aaKnown RBP16.14■□□□□ 0.17
R3HCC1-209ENST00000523720 PPP1R1BQ9UD71 204 aaPredicted RBP16.14■□□□□ 0.17
R3HCC1-209ENST00000523720 SPG7Q9UQ90 795 aa16.14■□□□□ 0.17
R3HCC1-209ENST00000523720 EYA1Q99502 592 aa16.13■□□□□ 0.17
R3HCC1-209ENST00000523720 IGSF1Q8N6C5 1336 aa16.13■□□□□ 0.17
R3HCC1-209ENST00000523720 COL24A1Q17RW2 1714 aa16.11■□□□□ 0.17
R3HCC1-209ENST00000523720 CYP27B1O15528 508 aa16.11■□□□□ 0.17
R3HCC1-209ENST00000523720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.11■□□□□ 0.17
R3HCC1-209ENST00000523720 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
R3HCC1-209ENST00000523720 ZNF827Q17R98 1081 aa16.1■□□□□ 0.17
R3HCC1-209ENST00000523720 AMER1Q5JTC6 1135 aaPredicted RBP16.1■□□□□ 0.17
R3HCC1-209ENST00000523720 C4BP0C0L5 1744 aa16.09■□□□□ 0.17
R3HCC1-209ENST00000523720 ZBTB7AO95365 584 aa16.09■□□□□ 0.17
R3HCC1-209ENST00000523720 LRRC4BQ9NT99 713 aa16.09■□□□□ 0.17
R3HCC1-209ENST00000523720 CCNL1Q9UK58 526 aaPredicted RBP16.09■□□□□ 0.17
R3HCC1-209ENST00000523720 PALLDQ8WX93 1383 aa16.09■□□□□ 0.17
R3HCC1-209ENST00000523720 HMGB2P26583 209 aaKnown RBP16.08■□□□□ 0.16
R3HCC1-209ENST00000523720 PDGFDQ9GZP0 370 aaPredicted RBP16.08■□□□□ 0.16
R3HCC1-209ENST00000523720 MTFR1LQ9H019 292 aa16.08■□□□□ 0.16
R3HCC1-209ENST00000523720 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
R3HCC1-209ENST00000523720 NPC1L1Q9UHC9 1359 aa16.07■□□□□ 0.16
R3HCC1-209ENST00000523720 SCN11AQ9UI33 1791 aa16.07■□□□□ 0.16
R3HCC1-209ENST00000523720 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
R3HCC1-209ENST00000523720 ZNF831Q5JPB2 1677 aa16.06■□□□□ 0.16
R3HCC1-209ENST00000523720 MPRIPQ6WCQ1 1025 aa16.06■□□□□ 0.16
R3HCC1-209ENST00000523720 IFNL2Q8IZJ0 200 aa16.06■□□□□ 0.16
R3HCC1-209ENST00000523720 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
R3HCC1-209ENST00000523720 KDRP35968 1356 aa16.05■□□□□ 0.16
R3HCC1-209ENST00000523720 PHKG2P15735 406 aa16.05■□□□□ 0.16
R3HCC1-209ENST00000523720 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
R3HCC1-209ENST00000523720 TMOD3Q9NYL9 352 aa16.04■□□□□ 0.16
R3HCC1-209ENST00000523720 TFCP2L1Q9NZI6 479 aa16.04■□□□□ 0.16
R3HCC1-209ENST00000523720 COL5A3P25940 1745 aaPredicted RBP16.03■□□□□ 0.16
R3HCC1-209ENST00000523720 PNPLA7Q6ZV29 1317 aa16.03■□□□□ 0.16
R3HCC1-209ENST00000523720 HSP90AB1P08238 724 aaKnown RBP16.03■□□□□ 0.16
R3HCC1-209ENST00000523720 PTGER2P43116 358 aa16.03■□□□□ 0.16
R3HCC1-209ENST00000523720 KCNQ4P56696 695 aa16.03■□□□□ 0.16
R3HCC1-209ENST00000523720 CC2D1BQ5T0F9 858 aaKnown RBP16.03■□□□□ 0.16
R3HCC1-209ENST00000523720 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
R3HCC1-209ENST00000523720 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.16
R3HCC1-209ENST00000523720 AMOTQ4VCS5 1084 aa16.02■□□□□ 0.16
R3HCC1-209ENST00000523720 PLEKHO1Q53GL0 409 aaPredicted RBP16.02■□□□□ 0.16
R3HCC1-209ENST00000523720 SLC16A10Q8TF71 515 aa16.02■□□□□ 0.16
R3HCC1-209ENST00000523720 ZNF530Q6P9A1 599 aaPredicted RBP16.01■□□□□ 0.15
R3HCC1-209ENST00000523720 COL3A1P02461 1466 aaPredicted RBP16.01■□□□□ 0.15
R3HCC1-209ENST00000523720 KDM6AO15550 1401 aaPredicted RBP16.01■□□□□ 0.15
R3HCC1-209ENST00000523720 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
R3HCC1-209ENST00000523720 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
R3HCC1-209ENST00000523720 IL13P35225 146 aa16■□□□□ 0.15
R3HCC1-209ENST00000523720 MTHFSP49914 203 aa16■□□□□ 0.15
R3HCC1-209ENST00000523720 C1orf141Q5JVX7 400 aa16■□□□□ 0.15
R3HCC1-209ENST00000523720 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
R3HCC1-209ENST00000523720 AEBP1Q8IUX7 1158 aa16■□□□□ 0.15
R3HCC1-209ENST00000523720 PIGBQ92521 554 aa16■□□□□ 0.15
R3HCC1-209ENST00000523720 DCAF5Q96JK2 942 aa15.99■□□□□ 0.15
R3HCC1-209ENST00000523720 SGIP1Q9BQI5 828 aa15.99■□□□□ 0.15
R3HCC1-209ENST00000523720 MAP3K5Q99683 1374 aa15.99■□□□□ 0.15
R3HCC1-209ENST00000523720 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
R3HCC1-209ENST00000523720 POLD1P28340 1107 aa15.98■□□□□ 0.15
R3HCC1-209ENST00000523720 MRC1P22897 1456 aa15.97■□□□□ 0.15
R3HCC1-209ENST00000523720 ERVV-2B6SEH9 535 aa15.97■□□□□ 0.15
R3HCC1-209ENST00000523720 AK7Q96M32 723 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms