RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 IL16Q14005 1332 aa15.79■□□□□ 0.12
PCDHGB1-201ENST00000523390 CCDC27Q2M243 656 aa15.79■□□□□ 0.12
PCDHGB1-201ENST00000523390 RABEP1Q15276 862 aa15.79■□□□□ 0.12
PCDHGB1-201ENST00000523390 NFXL1Q6ZNB6 911 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 PHACTR3Q96KR7 559 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 CCDC34Q96HJ3 373 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 PIK3C2GO75747 1445 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 ADGBQ8N7X0 1667 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 CHD1O14646 1710 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 IGHDP01880 384 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 TBX22Q9Y458 520 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 TTC37Q6PGP7 1564 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 CHAF1AQ13111 956 aaPredicted RBP15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 ERCC6L2Q5T890 1561 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 NEO1Q92859 1461 aa15.78■□□□□ 0.12
PCDHGB1-201ENST00000523390 GLIPR1L2Q4G1C9 344 aa15.77■□□□□ 0.12
PCDHGB1-201ENST00000523390 CCDC57Q2TAC2 916 aa15.77■□□□□ 0.12
PCDHGB1-201ENST00000523390 DNAAF4Q8WXU2 420 aa15.77■□□□□ 0.12
PCDHGB1-201ENST00000523390 TNNQ9UQP3 1299 aa15.77■□□□□ 0.12
PCDHGB1-201ENST00000523390 LRRFIP2Q9Y608 721 aaKnown RBP15.77■□□□□ 0.12
PCDHGB1-201ENST00000523390 TMOD3Q9NYL9 352 aa15.77■□□□□ 0.11
PCDHGB1-201ENST00000523390 C8orf58Q8NAV2 365 aa15.76■□□□□ 0.11
PCDHGB1-201ENST00000523390 SPINK5Q9NQ38 1064 aaPredicted RBP15.76■□□□□ 0.11
PCDHGB1-201ENST00000523390 RAD21O60216 631 aa15.76■□□□□ 0.11
PCDHGB1-201ENST00000523390 MYD88Q99836 296 aa15.76■□□□□ 0.11
PCDHGB1-201ENST00000523390 DBF4Q9UBU7 674 aaPredicted RBP15.76■□□□□ 0.11
PCDHGB1-201ENST00000523390 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.76■□□□□ 0.11
PCDHGB1-201ENST00000523390 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
PCDHGB1-201ENST00000523390 CABLES1Q8TDN4 633 aa15.76■□□□□ 0.11
PCDHGB1-201ENST00000523390 TBC1D2BQ9UPU7 963 aa15.75■□□□□ 0.11
PCDHGB1-201ENST00000523390 AMOTL1Q8IY63 956 aa15.75■□□□□ 0.11
PCDHGB1-201ENST00000523390 LRRC59Q96AG4 307 aaKnown RBP15.75■□□□□ 0.11
PCDHGB1-201ENST00000523390 CEP126Q9P2H0 1117 aa15.75■□□□□ 0.11
PCDHGB1-201ENST00000523390 PSMA5P28066 241 aa15.75■□□□□ 0.11
PCDHGB1-201ENST00000523390 TRIM29Q14134 588 aa15.75■□□□□ 0.11
PCDHGB1-201ENST00000523390 CCDC158Q5M9N0 1113 aa15.75■□□□□ 0.11
PCDHGB1-201ENST00000523390 HIP1O00291 1037 aa15.74■□□□□ 0.11
PCDHGB1-201ENST00000523390 BICD2Q8TD16 824 aa15.74■□□□□ 0.11
PCDHGB1-201ENST00000523390 PCDHB15Q9Y5E8 787 aa15.74■□□□□ 0.11
PCDHGB1-201ENST00000523390 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
PCDHGB1-201ENST00000523390 TTC39AQ5SRH9 613 aa15.74■□□□□ 0.11
PCDHGB1-201ENST00000523390 CWC27Q6UX04 472 aaKnown RBP15.74■□□□□ 0.11
PCDHGB1-201ENST00000523390 KRT24Q2M2I5 525 aa15.74■□□□□ 0.11
PCDHGB1-201ENST00000523390 CREBRFQ8IUR6 639 aa15.74■□□□□ 0.11
PCDHGB1-201ENST00000523390 IFNL2Q8IZJ0 200 aa15.74■□□□□ 0.11
PCDHGB1-201ENST00000523390 MAP3K19Q56UN5 1328 aa15.74■□□□□ 0.11
PCDHGB1-201ENST00000523390 STARD3NLO95772 234 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 TPM4P67936 248 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 MTHFSDQ2M296 383 aaKnown RBP15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 KIF1BPQ96EK5 621 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 PI4KAP2A4QPH2 592 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 TSPYL6Q8N831 410 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 PI4KAP1Q8N8J0 262 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 SPATA31E1Q6ZUB1 1445 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 PTPRCP08575 1304 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 MARCH6O60337 910 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 CLSTN1O94985 981 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 MX1P20591 662 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 MPHOSPH8Q99549 860 aa15.73■□□□□ 0.11
PCDHGB1-201ENST00000523390 MSH6P52701 1360 aa15.72■□□□□ 0.11
PCDHGB1-201ENST00000523390 ERICH2A1L162 156 aa15.72■□□□□ 0.11
PCDHGB1-201ENST00000523390 FKBP4Q02790 459 aaKnown RBP eCLIP15.72■□□□□ 0.11
PCDHGB1-201ENST00000523390 EYA1Q99502 592 aa15.72■□□□□ 0.11
PCDHGB1-201ENST00000523390 FLT4P35916 1363 aa15.72■□□□□ 0.11
PCDHGB1-201ENST00000523390 FMNL2Q96PY5 1086 aa15.72■□□□□ 0.11
PCDHGB1-201ENST00000523390 KDM4AO75164 1064 aa15.72■□□□□ 0.11
PCDHGB1-201ENST00000523390 NPHP3Q7Z494 1330 aa15.71■□□□□ 0.11
PCDHGB1-201ENST00000523390 BICDL1Q6ZP65 573 aa15.71■□□□□ 0.11
PCDHGB1-201ENST00000523390 DHX16O60231 1041 aaKnown RBP15.71■□□□□ 0.11
PCDHGB1-201ENST00000523390 PRKCSHP14314 528 aaPredicted RBP15.71■□□□□ 0.11
PCDHGB1-201ENST00000523390 C19orf44Q9H6X5 657 aa15.71■□□□□ 0.11
PCDHGB1-201ENST00000523390 RLBP1P12271 317 aa15.71■□□□□ 0.1
PCDHGB1-201ENST00000523390 VPS53Q5VIR6 699 aa15.71■□□□□ 0.1
PCDHGB1-201ENST00000523390 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.71■□□□□ 0.1
PCDHGB1-201ENST00000523390 MEIS3Q99687 375 aa15.7■□□□□ 0.1
PCDHGB1-201ENST00000523390 ZBTB3Q9H5J0 574 aa15.7■□□□□ 0.1
PCDHGB1-201ENST00000523390 PTPRTO14522 1441 aa15.7■□□□□ 0.1
PCDHGB1-201ENST00000523390 LTKP29376 864 aa15.7■□□□□ 0.1
PCDHGB1-201ENST00000523390 MCM2P49736 904 aa15.7■□□□□ 0.1
PCDHGB1-201ENST00000523390 SLC39A6Q13433 755 aa15.7■□□□□ 0.1
PCDHGB1-201ENST00000523390 HYPKQ9NX55 129 aa15.7■□□□□ 0.1
PCDHGB1-201ENST00000523390 MAP3K2Q9Y2U5 619 aa15.7■□□□□ 0.1
PCDHGB1-201ENST00000523390 NPC1L1Q9UHC9 1359 aa15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 BECN2A8MW95 431 aa15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 GCP02774 474 aa15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 UGGT1Q9NYU2 1555 aa15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 K7ELQ4 463 aaPredicted RBP15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 RSPH6AQ9H0K4 717 aa15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 MTMR7Q9Y216 660 aa15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 ATP5J2-PTCD1G3V325 749 aa15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 RRP12Q5JTH9 1297 aaKnown RBP15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
PCDHGB1-201ENST00000523390 A0A087WZG4 1122 aa15.68■□□□□ 0.1
PCDHGB1-201ENST00000523390 CYP46A1Q9Y6A2 500 aa15.68■□□□□ 0.1
PCDHGB1-201ENST00000523390 CCDC8Q9H0W5 538 aaPredicted RBP15.68■□□□□ 0.1
PCDHGB1-201ENST00000523390 BOLA2Q9H3K6 86 aa15.68■□□□□ 0.1
PCDHGB1-201ENST00000523390 JARID2Q92833 1246 aaPredicted RBP15.68■□□□□ 0.1
PCDHGB1-201ENST00000523390 ZFYVE16Q7Z3T8 1539 aa15.68■□□□□ 0.1
PCDHGB1-201ENST00000523390 TRAK2O60296 914 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms