RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
GM2A-202ENST00000523004 RTL1A6NKG5 1358 aa11.06□□□□□ -0.64
GM2A-202ENST00000523004 GOLGB1Q14789 3259 aaKnown RBP11.06□□□□□ -0.64
GM2A-202ENST00000523004 FYB1O15117 783 aa11.06□□□□□ -0.64
GM2A-202ENST00000523004 ZCRB1Q8TBF4 217 aaKnown RBP11.06□□□□□ -0.64
GM2A-202ENST00000523004 SLC16A10Q8TF71 515 aa11.06□□□□□ -0.64
GM2A-202ENST00000523004 COL24A1Q17RW2 1714 aa11.06□□□□□ -0.64
GM2A-202ENST00000523004 NSD2O96028 1365 aa11.05□□□□□ -0.64
GM2A-202ENST00000523004 MEGF6O75095 1541 aa11.05□□□□□ -0.64
GM2A-202ENST00000523004 LY75O60449 1722 aa11.05□□□□□ -0.64
GM2A-202ENST00000523004 DOT1LQ8TEK3 1739 aa11.05□□□□□ -0.64
GM2A-202ENST00000523004 SYTL4Q96C24 671 aaPredicted RBP11.05□□□□□ -0.64
GM2A-202ENST00000523004 GGNBP2Q9H3C7 697 aa11.05□□□□□ -0.64
GM2A-202ENST00000523004 PNPLA7Q6ZV29 1317 aa11.05□□□□□ -0.64
GM2A-202ENST00000523004 TUBGCP6Q96RT7 1819 aa11.05□□□□□ -0.64
GM2A-202ENST00000523004 KCNQ4P56696 695 aa11.04□□□□□ -0.64
GM2A-202ENST00000523004 TMF1P82094 1093 aa11.04□□□□□ -0.64
GM2A-202ENST00000523004 RRS1Q15050 365 aaKnown RBP11.04□□□□□ -0.64
GM2A-202ENST00000523004 NBPF6Q5VWK0 638 aa11.04□□□□□ -0.64
GM2A-202ENST00000523004 ZNF784Q8NCA9 323 aaPredicted RBP11.04□□□□□ -0.64
GM2A-202ENST00000523004 NBPF4Q96M43 638 aa11.04□□□□□ -0.64
GM2A-202ENST00000523004 CGNL1Q0VF96 1302 aa11.04□□□□□ -0.64
GM2A-202ENST00000523004 USP47Q96K76 1375 aa11.03□□□□□ -0.64
GM2A-202ENST00000523004 ZEB1P37275 1124 aaPredicted RBP11.03□□□□□ -0.64
GM2A-202ENST00000523004 TFCP2L1Q9NZI6 479 aa11.03□□□□□ -0.64
GM2A-202ENST00000523004 MSH5O43196 834 aa11.02□□□□□ -0.65
GM2A-202ENST00000523004 RAPGEF4Q8WZA2 1011 aa11.02□□□□□ -0.65
GM2A-202ENST00000523004 INSRP06213 1382 aa11.02□□□□□ -0.65
GM2A-202ENST00000523004 SMG6Q86US8 1419 aaKnown RBP11.01□□□□□ -0.65
GM2A-202ENST00000523004 KIF20BQ96Q89 1820 aa11.01□□□□□ -0.65
GM2A-202ENST00000523004 POLD1P28340 1107 aa11.01□□□□□ -0.65
GM2A-202ENST00000523004 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
GM2A-202ENST00000523004 HSP90AB2PQ58FF8 381 aa11.01□□□□□ -0.65
GM2A-202ENST00000523004 USHBP1Q8N6Y0 703 aa11.01□□□□□ -0.65
GM2A-202ENST00000523004 CCNL1Q9UK58 526 aaPredicted RBP11.01□□□□□ -0.65
GM2A-202ENST00000523004 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
GM2A-202ENST00000523004 TATP17735 454 aaPredicted RBP11□□□□□ -0.65
GM2A-202ENST00000523004 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
GM2A-202ENST00000523004 FLT4P35916 1363 aa11□□□□□ -0.65
GM2A-202ENST00000523004 GPR162Q16538 588 aa10.99□□□□□ -0.65
GM2A-202ENST00000523004 PCDH11XQ9BZA7 1347 aa10.99□□□□□ -0.65
GM2A-202ENST00000523004 PCDH11YQ9BZA8 1340 aa10.99□□□□□ -0.65
GM2A-202ENST00000523004 TAF1LQ8IZX4 1826 aa10.98□□□□□ -0.65
GM2A-202ENST00000523004 CYP27B1O15528 508 aa10.98□□□□□ -0.65
GM2A-202ENST00000523004 COL23A1Q86Y22 540 aaPredicted RBP10.98□□□□□ -0.65
GM2A-202ENST00000523004 HMGB2P26583 209 aaKnown RBP10.97□□□□□ -0.65
GM2A-202ENST00000523004 KLHL34Q8N239 644 aa10.97□□□□□ -0.65
GM2A-202ENST00000523004 NLGN2Q8NFZ4 835 aa10.97□□□□□ -0.65
GM2A-202ENST00000523004 EMILIN1Q9Y6C2 1016 aa10.97□□□□□ -0.65
GM2A-202ENST00000523004 NCAPD2Q15021 1401 aa10.97□□□□□ -0.65
GM2A-202ENST00000523004 C5P01031 1676 aa10.97□□□□□ -0.65
GM2A-202ENST00000523004 ITGB4P16144 1822 aa10.97□□□□□ -0.65
GM2A-202ENST00000523004 PALLDQ8WX93 1383 aa10.96□□□□□ -0.65
GM2A-202ENST00000523004 MAP2P11137 1827 aaKnown RBP10.95□□□□□ -0.66
GM2A-202ENST00000523004 PKD1L3Q7Z443 1732 aa10.95□□□□□ -0.66
GM2A-202ENST00000523004 ANKRD26Q9UPS8 1709 aa10.95□□□□□ -0.66
GM2A-202ENST00000523004 NSD3Q9BZ95 1437 aa10.95□□□□□ -0.66
GM2A-202ENST00000523004 NKX1-1Q15270 411 aaPredicted RBP10.95□□□□□ -0.66
GM2A-202ENST00000523004 MPRIPQ6WCQ1 1025 aa10.95□□□□□ -0.66
GM2A-202ENST00000523004 FLAD1Q8NFF5 587 aa10.95□□□□□ -0.66
GM2A-202ENST00000523004 TIMELESSQ9UNS1 1208 aa10.95□□□□□ -0.66
GM2A-202ENST00000523004 TOGARAM1Q9Y4F4 1720 aa10.95□□□□□ -0.66
GM2A-202ENST00000523004 WASHC2AQ641Q2 1341 aa10.94□□□□□ -0.66
GM2A-202ENST00000523004 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
GM2A-202ENST00000523004 SMARCC1Q92922 1105 aaPredicted RBP10.94□□□□□ -0.66
GM2A-202ENST00000523004 YBX3P16989 372 aaKnown RBP eCLIP10.93□□□□□ -0.66
GM2A-202ENST00000523004 C1QTNF8P60827 252 aa10.93□□□□□ -0.66
GM2A-202ENST00000523004 MSL1Q68DK7 614 aa10.93□□□□□ -0.66
GM2A-202ENST00000523004 PIGBQ92521 554 aa10.93□□□□□ -0.66
GM2A-202ENST00000523004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.66
GM2A-202ENST00000523004 UBR3Q6ZT12 1888 aa10.93□□□□□ -0.66
GM2A-202ENST00000523004 C4BP0C0L5 1744 aa10.92□□□□□ -0.66
GM2A-202ENST00000523004 PPM1GO15355 546 aaPredicted RBP10.92□□□□□ -0.66
GM2A-202ENST00000523004 GRIN3BO60391 1043 aa10.92□□□□□ -0.66
GM2A-202ENST00000523004 EYA1Q99502 592 aa10.92□□□□□ -0.66
GM2A-202ENST00000523004 POLKQ9UBT6 870 aa10.92□□□□□ -0.66
GM2A-202ENST00000523004 SPG7Q9UQ90 795 aa10.92□□□□□ -0.66
GM2A-202ENST00000523004 CD2APQ9Y5K6 639 aa10.92□□□□□ -0.66
GM2A-202ENST00000523004 AMIGO3Q86WK7 504 aa10.91□□□□□ -0.66
GM2A-202ENST00000523004 AK7Q96M32 723 aa10.91□□□□□ -0.66
GM2A-202ENST00000523004 CLSPNQ9HAW4 1339 aa10.89□□□□□ -0.67
GM2A-202ENST00000523004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.89□□□□□ -0.67
GM2A-202ENST00000523004 LOC102724428A0A0B4J2F2 783 aa10.89□□□□□ -0.67
GM2A-202ENST00000523004 PHKG2P15735 406 aa10.89□□□□□ -0.67
GM2A-202ENST00000523004 SSFA2P28290 1259 aa10.89□□□□□ -0.67
GM2A-202ENST00000523004 SIK1P57059 783 aa10.89□□□□□ -0.67
GM2A-202ENST00000523004 IFNL2Q8IZJ0 200 aa10.89□□□□□ -0.67
GM2A-202ENST00000523004 ASAP1Q9ULH1 1129 aa10.89□□□□□ -0.67
GM2A-202ENST00000523004 PLEKHG2Q9H7P9 1386 aa10.89□□□□□ -0.67
GM2A-202ENST00000523004 SENP3-EIF4A1A0A087X0R7 540 aa10.88□□□□□ -0.67
GM2A-202ENST00000523004 GIGYF1O75420 1035 aaPredicted RBP10.88□□□□□ -0.67
GM2A-202ENST00000523004 EIF4A2Q14240 407 aaKnown RBP10.88□□□□□ -0.67
GM2A-202ENST00000523004 SMIM5Q71RC9 77 aa10.88□□□□□ -0.67
GM2A-202ENST00000523004 LINC00116Q8NCU8 138 aa10.88□□□□□ -0.67
GM2A-202ENST00000523004 TMOD3Q9NYL9 352 aa10.88□□□□□ -0.67
GM2A-202ENST00000523004 CEP350Q5VT06 3117 aa10.87□□□□□ -0.67
GM2A-202ENST00000523004 PHF14O94880 888 aa10.87□□□□□ -0.67
GM2A-202ENST00000523004 ITPK1Q13572 414 aa10.87□□□□□ -0.67
GM2A-202ENST00000523004 ATP6V1AP38606 617 aa10.86□□□□□ -0.67
GM2A-202ENST00000523004 TNNT2P45379 298 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms