RNA–Protein interactions for RNA: ENST00000522771.6

MEG3-220, Transcript of maternally expressed 3, humanhuman

TSL 5 BASIC

Gene MEG3, Length 6,984 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-220ENST00000522771 CCDC148Q8NFR7 591 aa12.73□□□□□ -0.37
MEG3-220ENST00000522771 CGNQ9P2M7 1197 aaKnown RBP12.73□□□□□ -0.37
MEG3-220ENST00000522771 PRAM1Q96QH2 718 aa12.73□□□□□ -0.37
MEG3-220ENST00000522771 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
MEG3-220ENST00000522771 PLEKHO1Q53GL0 409 aaPredicted RBP12.72□□□□□ -0.37
MEG3-220ENST00000522771 ABTB2Q8N961 1025 aa12.72□□□□□ -0.37
MEG3-220ENST00000522771 SRGAP3O43295 1099 aa12.72□□□□□ -0.37
MEG3-220ENST00000522771 NUTM1Q86Y26 1132 aa12.72□□□□□ -0.37
MEG3-220ENST00000522771 SMARCA5O60264 1052 aaPredicted RBP12.72□□□□□ -0.37
MEG3-220ENST00000522771 ARHGAP29Q52LW3 1261 aa12.72□□□□□ -0.37
MEG3-220ENST00000522771 KIF18AQ8NI77 898 aa12.72□□□□□ -0.37
MEG3-220ENST00000522771 POLR3GO15318 223 aaPredicted RBP12.72□□□□□ -0.37
MEG3-220ENST00000522771 FKBP4Q02790 459 aaKnown RBP eCLIP12.72□□□□□ -0.37
MEG3-220ENST00000522771 NOL7Q9UMY1 257 aaKnown RBP12.72□□□□□ -0.37
MEG3-220ENST00000522771 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
MEG3-220ENST00000522771 FERMT3Q86UX7 667 aa12.71□□□□□ -0.37
MEG3-220ENST00000522771 CLIP2Q9UDT6 1046 aa12.71□□□□□ -0.37
MEG3-220ENST00000522771 CDKL5O76039 1030 aa12.71□□□□□ -0.38
MEG3-220ENST00000522771 TRERF1Q96PN7 1200 aa12.71□□□□□ -0.38
MEG3-220ENST00000522771 SEPT11Q9NVA2 429 aaKnown RBP12.71□□□□□ -0.38
MEG3-220ENST00000522771 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.38
MEG3-220ENST00000522771 ERICH3Q5RHP9 1530 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 KIF2AO00139 706 aaPredicted RBP12.7□□□□□ -0.38
MEG3-220ENST00000522771 URI1O94763 535 aaPredicted RBP12.7□□□□□ -0.38
MEG3-220ENST00000522771 TNNT1P13805 278 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 MYL6BP14649 208 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 CRACR2AQ9BSW2 395 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 TMX1Q9H3N1 280 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 USP25Q9UHP3 1055 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 SFPQP23246 707 aaKnown RBP eCLIP12.7□□□□□ -0.38
MEG3-220ENST00000522771 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 CDK19Q9BWU1 502 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 GIMAP7Q8NHV1 300 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 TRMT1Q9NXH9 659 aaKnown RBP12.7□□□□□ -0.38
MEG3-220ENST00000522771 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
MEG3-220ENST00000522771 KRT32Q14532 448 aa12.7□□□□□ -0.38
MEG3-220ENST00000522771 C16orf45Q96MC5 204 aaPredicted RBP12.7□□□□□ -0.38
MEG3-220ENST00000522771 SHTN1A0MZ66 631 aa12.69□□□□□ -0.38
MEG3-220ENST00000522771 NACAP1Q9BZK3 213 aa12.69□□□□□ -0.38
MEG3-220ENST00000522771 GBP3Q9H0R5 595 aa12.69□□□□□ -0.38
MEG3-220ENST00000522771 EXOC6BQ9Y2D4 811 aa12.69□□□□□ -0.38
MEG3-220ENST00000522771 ZSCAN12O43309 604 aa12.69□□□□□ -0.38
MEG3-220ENST00000522771 EHBP1L1Q8N3D4 1523 aa12.69□□□□□ -0.38
MEG3-220ENST00000522771 NKTRP30414 1462 aaKnown RBP12.69□□□□□ -0.38
MEG3-220ENST00000522771 IBSPP21815 317 aaPredicted RBP12.69□□□□□ -0.38
MEG3-220ENST00000522771 ATP2B2Q01814 1243 aa12.68□□□□□ -0.38
MEG3-220ENST00000522771 ANKRD18AQ8IVF6 992 aa12.68□□□□□ -0.38
MEG3-220ENST00000522771 RPAP2Q8IXW5 612 aaPredicted RBP12.68□□□□□ -0.38
MEG3-220ENST00000522771 ANO10Q9NW15 660 aa12.68□□□□□ -0.38
MEG3-220ENST00000522771 CALCOCO1Q9P1Z2 691 aa12.68□□□□□ -0.38
MEG3-220ENST00000522771 CABP1Q9NZU7 370 aa12.68□□□□□ -0.38
MEG3-220ENST00000522771 HFM1A2PYH4 1435 aa12.68□□□□□ -0.38
MEG3-220ENST00000522771 SUPT6HQ7KZ85 1726 aaKnown RBP12.68□□□□□ -0.38
MEG3-220ENST00000522771 KIF5CO60282 957 aa12.68□□□□□ -0.38
MEG3-220ENST00000522771 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
MEG3-220ENST00000522771 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
MEG3-220ENST00000522771 PRPF40BQ6NWY9 871 aaKnown RBP12.67□□□□□ -0.38
MEG3-220ENST00000522771 TAF4BQ92750 862 aa12.67□□□□□ -0.38
MEG3-220ENST00000522771 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
MEG3-220ENST00000522771 ADCY5O95622 1261 aa12.67□□□□□ -0.38
MEG3-220ENST00000522771 ZSCAN25Q6NSZ9 544 aa12.67□□□□□ -0.38
MEG3-220ENST00000522771 ZNF397Q8NF99 534 aaPredicted RBP12.67□□□□□ -0.38
MEG3-220ENST00000522771 PIBF1Q8WXW3 757 aa12.67□□□□□ -0.38
MEG3-220ENST00000522771 PDIA4P13667 645 aaKnown RBP12.67□□□□□ -0.38
MEG3-220ENST00000522771 CKAP2LQ8IYA6 745 aa12.67□□□□□ -0.38
MEG3-220ENST00000522771 INCENPQ9NQS7 918 aa12.67□□□□□ -0.38
MEG3-220ENST00000522771 CCDC57Q2TAC2 916 aa12.67□□□□□ -0.38
MEG3-220ENST00000522771 GNL3LQ9NVN8 582 aaKnown RBP12.67□□□□□ -0.38
MEG3-220ENST00000522771 GBP2P32456 591 aaPredicted RBP12.66□□□□□ -0.38
MEG3-220ENST00000522771 MAP9Q49MG5 647 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 PLEKHH2Q8IVE3 1493 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 CTNNA3Q9UI47 895 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 TOP1P11387 765 aaKnown RBP12.66□□□□□ -0.38
MEG3-220ENST00000522771 MX1P20591 662 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 GTF2F1P35269 517 aaKnown RBP eCLIP12.66□□□□□ -0.38
MEG3-220ENST00000522771 RARSP54136 660 aaKnown RBP12.66□□□□□ -0.38
MEG3-220ENST00000522771 SOGA3Q5TF21 947 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 C9orf84Q5VXU9 1444 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 KIF4BQ2VIQ3 1234 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 DDX54Q8TDD1 881 aaKnown RBP12.66□□□□□ -0.38
MEG3-220ENST00000522771 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 SSBP05455 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
MEG3-220ENST00000522771 ATF3P18847 181 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 JAKMIP3Q5VZ66 844 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 ANKRD30BQ9BXX2 1392 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 TIAM1Q13009 1591 aa12.66□□□□□ -0.38
MEG3-220ENST00000522771 SPINK5Q9NQ38 1064 aaPredicted RBP12.65□□□□□ -0.38
MEG3-220ENST00000522771 TDO2P48775 406 aa12.65□□□□□ -0.38
MEG3-220ENST00000522771 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
MEG3-220ENST00000522771 GDPD2Q9HCC8 539 aa12.65□□□□□ -0.38
MEG3-220ENST00000522771 RAI14Q9P0K7 980 aa12.65□□□□□ -0.38
MEG3-220ENST00000522771 CEP131Q9UPN4 1083 aa12.65□□□□□ -0.38
MEG3-220ENST00000522771 NSD3Q9BZ95 1437 aa12.65□□□□□ -0.38
MEG3-220ENST00000522771 KLHL10Q6JEL2 608 aa12.65□□□□□ -0.38
MEG3-220ENST00000522771 WASF1Q92558 559 aa12.65□□□□□ -0.38
MEG3-220ENST00000522771 UBAC1Q9BSL1 405 aa12.65□□□□□ -0.38
MEG3-220ENST00000522771 GUCY1B3Q02153 619 aa12.65□□□□□ -0.39
MEG3-220ENST00000522771 LARP6Q9BRS8 491 aaKnown RBP12.65□□□□□ -0.39
MEG3-220ENST00000522771 MAP2K1Q02750 393 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms