RNA–Protein interactions for RNA: ENST00000522585.1

MRPS27-215, Transcript of mitochondrial ribosomal protein S27, human

TSL 3

Gene MRPS27, Length 127 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS27-215	ENST00000522585	CDCA7	Q9BWT1	371 aa	Predicted RBP	0.94	□□□□□ -2.26
MRPS27-215	ENST00000522585	ZFAND3	Q9H8U3	227 aa		0.94	□□□□□ -2.26
MRPS27-215	ENST00000522585		H7C1W4	665 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	BIN1	O00499	593 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	GRIN3B	O60391	1043 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	FMNL1	O95466	1100 aa	Predicted RBP	0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	FSHB	P01225	129 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	CFH	P08603	1231 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	CELA3B	P08861	270 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	KRT10	P13645	584 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	TMEM132A	Q24JP5	1023 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	SPATS1	Q496A3	300 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	MSS51	Q4VC12	460 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	CERK	Q8TCT0	537 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	ITPKC	Q96DU7	683 aa		0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	SSBP4	Q9BWG4	385 aa	Predicted RBP	0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	CUEDC1	Q9NWM3	386 aa	Predicted RBP	0.93	□□□□□ -2.26
MRPS27-215	ENST00000522585	ZBTB22	O15209	634 aa		0.92	□□□□□ -2.26
MRPS27-215	ENST00000522585	SPTLC1	O15269	473 aa		0.92	□□□□□ -2.26
MRPS27-215	ENST00000522585	TGFB1	P01137	390 aa		0.92	□□□□□ -2.26
MRPS27-215	ENST00000522585	EPX	P11678	715 aa		0.92	□□□□□ -2.26
MRPS27-215	ENST00000522585	TRIM28	Q13263	835 aa	Known RBP	0.92	□□□□□ -2.26
MRPS27-215	ENST00000522585	PRR23C	Q6ZRP0	262 aa		0.92	□□□□□ -2.26
MRPS27-215	ENST00000522585	FAM160A2	Q8N612	972 aa	Predicted RBP	0.92	□□□□□ -2.26
MRPS27-215	ENST00000522585	ANGEL1	Q9UNK9	670 aa	Known RBP	0.92	□□□□□ -2.26
MRPS27-215	ENST00000522585	MEGF11	A6BM72	1044 aa		0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	KRTAP9-6	A8MVA2	160 aa		0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	PAPLN	O95428	1278 aa		0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	ERBB2	P04626	1255 aa		0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	CHSY3	Q70JA7	882 aa		0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	MFRP	Q9BY79	579 aa		0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	PARD6A	Q9NPB6	346 aa		0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	PRDM9	Q9NQV7	894 aa		0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	IGSF5	Q9NSI5	407 aa		0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	TLL2	Q9Y6L7	1015 aa		0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	0.91	□□□□□ -2.26
MRPS27-215	ENST00000522585	PCSK5	Q92824	1860 aa		0.9	□□□□□ -2.26
MRPS27-215	ENST00000522585		A0A0G2JLL6	359 aa	Predicted RBP	0.9	□□□□□ -2.27
MRPS27-215	ENST00000522585	C3orf80	F5H4A9	247 aa		0.9	□□□□□ -2.27
MRPS27-215	ENST00000522585	INHBC	P55103	352 aa		0.9	□□□□□ -2.27
MRPS27-215	ENST00000522585	MESP2	Q0VG99	397 aa		0.9	□□□□□ -2.27
MRPS27-215	ENST00000522585	TMEM40	Q8WWA1	233 aa		0.9	□□□□□ -2.27
MRPS27-215	ENST00000522585	GTPBP3	Q969Y2	492 aa	Known RBP	0.9	□□□□□ -2.27
MRPS27-215	ENST00000522585	FAM198A	Q9UFP1	575 aa		0.9	□□□□□ -2.27
MRPS27-215	ENST00000522585	CNTNAP4	Q9C0A0	1308 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	SPINT1	O43278	529 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	FECH	P22830	423 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	GDF5	P43026	501 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	KRTAP10-11	P60412	298 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	GPR162	Q16538	588 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	ATG9B	Q674R7	924 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	THAP11	Q96EK4	314 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	FBXL18	Q96ME1	805 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	NELL2	Q99435	816 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	GPR20	Q99678	358 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	GGA1	Q9UJY5	639 aa		0.89	□□□□□ -2.27
MRPS27-215	ENST00000522585	GRIK4	Q16099	956 aa		0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	RNF135	Q8IUD6	432 aa		0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	SPATA3	Q8NHX4	192 aa		0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	LENG1	Q96BZ8	264 aa	Predicted RBP	0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	RBM33	Q96EV2	1170 aa	Known RBP	0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	SLC4A1AP	Q9BWU0	796 aa	Known RBP	0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	CFHR5	Q9BXR6	569 aa		0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	RTEL1	Q9NZ71	1219 aa		0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	RBM27	Q9P2N5	1060 aa	Known RBP	0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	PHF24	Q9UPV7	400 aa		0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	SALL2	Q9Y467	1007 aa	Predicted RBP	0.88	□□□□□ -2.27
MRPS27-215	ENST00000522585	PROB1	E7EW31	1015 aa		0.87	□□□□□ -2.27
MRPS27-215	ENST00000522585	CYR61	O00622	381 aa		0.87	□□□□□ -2.27
MRPS27-215	ENST00000522585	TNFRSF1A	P19438	455 aa		0.87	□□□□□ -2.27
MRPS27-215	ENST00000522585	MMP16	P51512	607 aa		0.87	□□□□□ -2.27
MRPS27-215	ENST00000522585	XKR5	Q6UX68	686 aa		0.87	□□□□□ -2.27
MRPS27-215	ENST00000522585	IGLV1-40	P01703	118 aa		0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	SKI	P12755	728 aa		0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	VARS	P26640	1264 aa	Known RBP	0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	NR5A1	Q13285	461 aa		0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	DBN1	Q16643	649 aa		0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	PUS10	Q3MIT2	529 aa	Known RBP	0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	PRPF38B	Q5VTL8	546 aa	Known RBP	0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	MSL1	Q68DK7	614 aa		0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	CIAPIN1	Q6FI81	312 aa		0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	ZCCHC4	Q9H5U6	513 aa		0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	CARMIL2	Q6F5E8	1435 aa		0.86	□□□□□ -2.27
MRPS27-215	ENST00000522585	FAM229A	H3BQW9	127 aa		0.85	□□□□□ -2.27
MRPS27-215	ENST00000522585	EFEMP1	Q12805	493 aa		0.85	□□□□□ -2.27
MRPS27-215	ENST00000522585	RIPOR1	Q6ZS17	1223 aa		0.85	□□□□□ -2.27
MRPS27-215	ENST00000522585	TP53INP2	Q8IXH6	220 aa		0.85	□□□□□ -2.27
MRPS27-215	ENST00000522585	CCDC24	Q8N4L8	307 aa		0.85	□□□□□ -2.27
MRPS27-215	ENST00000522585	AGBL5	Q8NDL9	886 aa		0.85	□□□□□ -2.27
MRPS27-215	ENST00000522585	PALD1	Q9ULE6	856 aa		0.85	□□□□□ -2.27
MRPS27-215	ENST00000522585	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	0.84	□□□□□ -2.27
MRPS27-215	ENST00000522585	MAP3K7	O43318	606 aa		0.84	□□□□□ -2.27
MRPS27-215	ENST00000522585	SLPI	P03973	132 aa		0.84	□□□□□ -2.27
MRPS27-215	ENST00000522585	BMP4	P12644	408 aa		0.84	□□□□□ -2.27
MRPS27-215	ENST00000522585	SELP	P16109	830 aa		0.84	□□□□□ -2.27
MRPS27-215	ENST00000522585	CTGF	P29279	349 aa		0.84	□□□□□ -2.27
MRPS27-215	ENST00000522585	SMN1	Q16637	294 aa	Known RBP	0.84	□□□□□ -2.27
MRPS27-215	ENST00000522585	GLCCI1	Q86VQ1	547 aa		0.84	□□□□□ -2.27
MRPS27-215	ENST00000522585	FAM168A	Q92567	244 aa		0.84	□□□□□ -2.27
MRPS27-215	ENST00000522585	ZFP91	Q96JP5	570 aa	Predicted RBP	0.84	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms