RNA–Protein interactions for RNA: ENST00000522008.1

CHRNA2-209, Transcript of cholinergic receptor nicotinic alpha 2 subunit, human

TSL 4

Gene CHRNA2, Length 545 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA2-209	ENST00000522008	LRP6	O75581	1613 aa		13.28	□□□□□ -0.28
CHRNA2-209	ENST00000522008	IL2RB	P14784	551 aa		13.27	□□□□□ -0.29
CHRNA2-209	ENST00000522008	VPS72	Q15906	364 aa		13.27	□□□□□ -0.29
CHRNA2-209	ENST00000522008	SPG7	Q9UQ90	795 aa		13.27	□□□□□ -0.29
CHRNA2-209	ENST00000522008	MTHFSD	Q2M296	383 aa	Known RBP	13.26	□□□□□ -0.29
CHRNA2-209	ENST00000522008	BCL9L	Q86UU0	1499 aa		13.26	□□□□□ -0.29
CHRNA2-209	ENST00000522008	NRAP	Q86VF7	1730 aa		13.26	□□□□□ -0.29
CHRNA2-209	ENST00000522008	WDR63	Q8IWG1	891 aa		13.26	□□□□□ -0.29
CHRNA2-209	ENST00000522008	SPATA31A1	Q5TZJ5	1347 aa		13.25	□□□□□ -0.29
CHRNA2-209	ENST00000522008	SPATA31A5	Q5VU36	1347 aa		13.25	□□□□□ -0.29
CHRNA2-209	ENST00000522008	SPATA31A7	Q8IWB4	1347 aa		13.25	□□□□□ -0.29
CHRNA2-209	ENST00000522008	NEUROD2	Q15784	382 aa		13.25	□□□□□ -0.29
CHRNA2-209	ENST00000522008	BARGIN	Q6ZT62	677 aa		13.25	□□□□□ -0.29
CHRNA2-209	ENST00000522008	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.25	□□□□□ -0.29
CHRNA2-209	ENST00000522008	CALD1	Q05682	793 aa	Known RBP	13.24	□□□□□ -0.29
CHRNA2-209	ENST00000522008	WWC1	Q8IX03	1113 aa		13.24	□□□□□ -0.29
CHRNA2-209	ENST00000522008	RTF1	Q92541	710 aa	Known RBP	13.24	□□□□□ -0.29
CHRNA2-209	ENST00000522008	TRPC5	Q9UL62	973 aa	Predicted RBP	13.24	□□□□□ -0.29
CHRNA2-209	ENST00000522008	SALL2	Q9Y467	1007 aa	Predicted RBP	13.24	□□□□□ -0.29
CHRNA2-209	ENST00000522008	AFF2	P51816	1311 aa		13.23	□□□□□ -0.29
CHRNA2-209	ENST00000522008	GNAT3	A8MTJ3	354 aa		13.23	□□□□□ -0.29
CHRNA2-209	ENST00000522008	AKAP4	Q5JQC9	854 aa		13.23	□□□□□ -0.29
CHRNA2-209	ENST00000522008	ZNF772	Q68DY9	489 aa	Predicted RBP	13.23	□□□□□ -0.29
CHRNA2-209	ENST00000522008	POTEA	Q6S8J7	498 aa		13.23	□□□□□ -0.29
CHRNA2-209	ENST00000522008	IFNL2	Q8IZJ0	200 aa		13.23	□□□□□ -0.29
CHRNA2-209	ENST00000522008	ZCRB1	Q8TBF4	217 aa	Known RBP	13.23	□□□□□ -0.29
CHRNA2-209	ENST00000522008	USP35	Q9P2H5	1018 aa		13.23	□□□□□ -0.29
CHRNA2-209	ENST00000522008	CCDC9	Q9Y3X0	531 aa	Known RBP	13.23	□□□□□ -0.29
CHRNA2-209	ENST00000522008	ZNF521	Q96K83	1311 aa		13.22	□□□□□ -0.29
CHRNA2-209	ENST00000522008	EXOC5	O00471	708 aa		13.22	□□□□□ -0.29
CHRNA2-209	ENST00000522008	HSP90AB1	P08238	724 aa	Known RBP	13.22	□□□□□ -0.29
CHRNA2-209	ENST00000522008	GOLGA2	Q08379	1002 aa		13.22	□□□□□ -0.29
CHRNA2-209	ENST00000522008	C1orf141	Q5JVX7	400 aa		13.22	□□□□□ -0.29
CHRNA2-209	ENST00000522008	TRIM35	Q9UPQ4	493 aa		13.22	□□□□□ -0.29
CHRNA2-209	ENST00000522008	RRP7A	Q9Y3A4	280 aa	Known RBP	13.22	□□□□□ -0.29
CHRNA2-209	ENST00000522008	PARP4	Q9UKK3	1724 aa	Known RBP	13.22	□□□□□ -0.29
CHRNA2-209	ENST00000522008	IL16	Q14005	1332 aa		13.21	□□□□□ -0.29
CHRNA2-209	ENST00000522008	GJD4	Q96KN9	370 aa	Predicted RBP	13.21	□□□□□ -0.29
CHRNA2-209	ENST00000522008	DLG5	Q8TDM6	1919 aa		13.21	□□□□□ -0.3
CHRNA2-209	ENST00000522008	OVOS2	A0A0G2JMS6	1433 aa		13.21	□□□□□ -0.3
CHRNA2-209	ENST00000522008	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.2	□□□□□ -0.3
CHRNA2-209	ENST00000522008	QTRT2	Q9H974	415 aa	Known RBP	13.2	□□□□□ -0.3
CHRNA2-209	ENST00000522008	MEGF6	O75095	1541 aa		13.19	□□□□□ -0.3
CHRNA2-209	ENST00000522008	PCDH11X	Q9BZA7	1347 aa		13.19	□□□□□ -0.3
CHRNA2-209	ENST00000522008	PCDH11Y	Q9BZA8	1340 aa		13.19	□□□□□ -0.3
CHRNA2-209	ENST00000522008	ONECUT3	O60422	494 aa	Predicted RBP	13.19	□□□□□ -0.3
CHRNA2-209	ENST00000522008	CENPB	P07199	599 aa	Predicted RBP	13.19	□□□□□ -0.3
CHRNA2-209	ENST00000522008	PHKG2	P15735	406 aa		13.19	□□□□□ -0.3
CHRNA2-209	ENST00000522008	DISP2	A7MBM2	1401 aa		13.19	□□□□□ -0.3
CHRNA2-209	ENST00000522008	MAP3K5	Q99683	1374 aa		13.19	□□□□□ -0.3
CHRNA2-209	ENST00000522008		E9PSI1	815 aa		13.18	□□□□□ -0.3
CHRNA2-209	ENST00000522008	NKX1-1	Q15270	411 aa	Predicted RBP	13.18	□□□□□ -0.3
CHRNA2-209	ENST00000522008	DDB1	Q16531	1140 aa		13.18	□□□□□ -0.3
CHRNA2-209	ENST00000522008	BABAM1	Q9NWV8	329 aa		13.18	□□□□□ -0.3
CHRNA2-209	ENST00000522008	ATRN	O75882	1429 aa		13.18	□□□□□ -0.3
CHRNA2-209	ENST00000522008	PKD1L3	Q7Z443	1732 aa		13.18	□□□□□ -0.3
CHRNA2-209	ENST00000522008	SENP3-EIF4A1	A0A087X0R7	540 aa		13.17	□□□□□ -0.3
CHRNA2-209	ENST00000522008	GNAI1	P63096	354 aa		13.17	□□□□□ -0.3
CHRNA2-209	ENST00000522008	SLFN5	Q08AF3	891 aa		13.17	□□□□□ -0.3
CHRNA2-209	ENST00000522008	DCAF5	Q96JK2	942 aa		13.17	□□□□□ -0.3
CHRNA2-209	ENST00000522008	TRMT2A	Q8IZ69	625 aa	Known RBP	13.16	□□□□□ -0.3
CHRNA2-209	ENST00000522008	IL17RE	Q8NFR9	667 aa		13.16	□□□□□ -0.3
CHRNA2-209	ENST00000522008	CFAP44	Q96MT7	982 aa		13.16	□□□□□ -0.3
CHRNA2-209	ENST00000522008	MYH16	Q9H6N6	1097 aa		13.16	□□□□□ -0.3
CHRNA2-209	ENST00000522008	CYP27B1	O15528	508 aa		13.15	□□□□□ -0.3
CHRNA2-209	ENST00000522008	RNMT	O43148	476 aa	Known RBP	13.15	□□□□□ -0.3
CHRNA2-209	ENST00000522008	RBM6	P78332	1123 aa	Known RBP	13.15	□□□□□ -0.3
CHRNA2-209	ENST00000522008	TAF7	Q15545	349 aa	Predicted RBP	13.15	□□□□□ -0.3
CHRNA2-209	ENST00000522008	DDX54	Q8TDD1	881 aa	Known RBP	13.15	□□□□□ -0.3
CHRNA2-209	ENST00000522008	IFT57	Q9NWB7	429 aa		13.15	□□□□□ -0.3
CHRNA2-209	ENST00000522008	WNK3	Q9BYP7	1800 aa		13.15	□□□□□ -0.3
CHRNA2-209	ENST00000522008	ERVV-2	B6SEH9	535 aa		13.14	□□□□□ -0.31
CHRNA2-209	ENST00000522008	ZNF853	P0CG23	659 aa		13.14	□□□□□ -0.31
CHRNA2-209	ENST00000522008	TEF	Q10587	303 aa		13.14	□□□□□ -0.31
CHRNA2-209	ENST00000522008	DCTN1	Q14203	1278 aa		13.14	□□□□□ -0.31
CHRNA2-209	ENST00000522008	FAM98C	Q17RN3	349 aa	Known RBP	13.14	□□□□□ -0.31
CHRNA2-209	ENST00000522008	MPRIP	Q6WCQ1	1025 aa		13.14	□□□□□ -0.31
CHRNA2-209	ENST00000522008	MCM10	Q7L590	875 aa		13.14	□□□□□ -0.31
CHRNA2-209	ENST00000522008	LGR6	Q9HBX8	967 aa		13.14	□□□□□ -0.31
CHRNA2-209	ENST00000522008	CEMIP	Q8WUJ3	1361 aa		13.14	□□□□□ -0.31
CHRNA2-209	ENST00000522008	CHL1	O00533	1208 aa		13.13	□□□□□ -0.31
CHRNA2-209	ENST00000522008	CDCA7L	Q96GN5	454 aa		13.13	□□□□□ -0.31
CHRNA2-209	ENST00000522008	DUSP27	Q5VZP5	1158 aa		13.12	□□□□□ -0.31
CHRNA2-209	ENST00000522008	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
CHRNA2-209	ENST00000522008	TNS2	Q63HR2	1409 aa		13.12	□□□□□ -0.31
CHRNA2-209	ENST00000522008	SCN11A	Q9UI33	1791 aa		13.12	□□□□□ -0.31
CHRNA2-209	ENST00000522008	ADAMTS7	Q9UKP4	1686 aa		13.12	□□□□□ -0.31
CHRNA2-209	ENST00000522008	GLI3	P10071	1580 aa		13.11	□□□□□ -0.31
CHRNA2-209	ENST00000522008	CT47B1	P0C2W7	299 aa	Predicted RBP	13.11	□□□□□ -0.31
CHRNA2-209	ENST00000522008	RXRB	P28702	533 aa		13.11	□□□□□ -0.31
CHRNA2-209	ENST00000522008	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.11	□□□□□ -0.31
CHRNA2-209	ENST00000522008	VIRMA	Q69YN4	1812 aa	Known RBP	13.11	□□□□□ -0.31
CHRNA2-209	ENST00000522008	SHANK3	Q9BYB0	1731 aa		13.1	□□□□□ -0.31
CHRNA2-209	ENST00000522008	BTBD11	A6QL63	1104 aa		13.1	□□□□□ -0.31
CHRNA2-209	ENST00000522008	CABP4	P57796	275 aa		13.1	□□□□□ -0.31
CHRNA2-209	ENST00000522008	THUMPD2	Q9BTF0	503 aa	Known RBP	13.1	□□□□□ -0.31
CHRNA2-209	ENST00000522008	SLC52A2	Q9HAB3	445 aa		13.1	□□□□□ -0.31
CHRNA2-209	ENST00000522008	LAS1L	Q9Y4W2	734 aa	Known RBP	13.1	□□□□□ -0.31
CHRNA2-209	ENST00000522008		A0A0G2JS52	829 aa		13.09	□□□□□ -0.31
CHRNA2-209	ENST00000522008	MYT1	Q01538	1121 aa		13.09	□□□□□ -0.31

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