RNA–Protein interactions for RNA: ENST00000521902.5

RUNX1T1-238, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-238	ENST00000521902	CD2AP	Q9Y5K6	639 aa		20.35	■□□□□ 0.85
RUNX1T1-238	ENST00000521902	COL24A1	Q17RW2	1714 aa		20.34	■□□□□ 0.85
RUNX1T1-238	ENST00000521902	EDC4	Q6P2E9	1401 aa	Known RBP	20.34	■□□□□ 0.85
RUNX1T1-238	ENST00000521902	KAT6B	Q8WYB5	2073 aa		20.33	■□□□□ 0.85
RUNX1T1-238	ENST00000521902	GPBP1L1	Q9HC44	474 aa	Predicted RBP	20.33	■□□□□ 0.85
RUNX1T1-238	ENST00000521902	ATP10D	Q9P241	1426 aa		20.33	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	MSL1	Q68DK7	614 aa		20.32	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	QSER1	Q2KHR3	1735 aa		20.32	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	MON2	Q7Z3U7	1717 aa		20.31	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	HSPA6	P17066	643 aa		20.31	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	NEUROD1	Q13562	356 aa		20.31	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	PUS7	Q96PZ0	661 aa	Known RBP	20.31	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	USP54	Q70EL1	1684 aa		20.31	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	HOXC9	P31274	260 aa		20.3	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	USP47	Q96K76	1375 aa		20.3	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	MAP3K19	Q56UN5	1328 aa		20.29	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	HMGB2	P26583	209 aa	Known RBP	20.29	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	FLAD1	Q8NFF5	587 aa		20.29	■□□□□ 0.84
RUNX1T1-238	ENST00000521902		A0A1W2PP64	1363 aa		20.29	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	FBLN1	P23142	703 aa		20.28	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	AMPH	P49418	695 aa		20.28	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	CARD11	Q9BXL7	1154 aa		20.28	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	COG3	Q96JB2	828 aa		20.27	■□□□□ 0.84
RUNX1T1-238	ENST00000521902	NBPF6	Q5VWK0	638 aa		20.26	■□□□□ 0.83
RUNX1T1-238	ENST00000521902	NBPF4	Q96M43	638 aa		20.26	■□□□□ 0.83
RUNX1T1-238	ENST00000521902	LTN1	O94822	1766 aa		20.26	■□□□□ 0.83
RUNX1T1-238	ENST00000521902	CGNL1	Q0VF96	1302 aa		20.26	■□□□□ 0.83
RUNX1T1-238	ENST00000521902	ADCY9	O60503	1353 aa		20.25	■□□□□ 0.83
RUNX1T1-238	ENST00000521902	MEGF6	O75095	1541 aa		20.24	■□□□□ 0.83
RUNX1T1-238	ENST00000521902	ZNF526	Q8TF50	670 aa	Predicted RBP	20.24	■□□□□ 0.83
RUNX1T1-238	ENST00000521902	LY75	O60449	1722 aa		20.22	■□□□□ 0.83
RUNX1T1-238	ENST00000521902	TUBGCP6	Q96RT7	1819 aa		20.21	■□□□□ 0.83
RUNX1T1-238	ENST00000521902	RAPGEF4	Q8WZA2	1011 aa		20.21	■□□□□ 0.83
RUNX1T1-238	ENST00000521902	MPRIP	Q6WCQ1	1025 aa		20.19	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	USHBP1	Q8N6Y0	703 aa		20.19	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	IGSF1	Q8N6C5	1336 aa		20.19	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	PALLD	Q8WX93	1383 aa		20.19	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	KIF3C	O14782	793 aa		20.18	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	TAT	P17735	454 aa	Predicted RBP	20.18	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	RRS1	Q15050	365 aa	Known RBP	20.18	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	AMIGO3	Q86WK7	504 aa		20.18	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	DOT1L	Q8TEK3	1739 aa		20.17	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	SMARCC1	Q92922	1105 aa	Predicted RBP	20.17	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	AK7	Q96M32	723 aa		20.17	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	FAM208A	Q9UK61	1670 aa	Known RBP	20.16	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	PCDH11X	Q9BZA7	1347 aa		20.16	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	PCDH11Y	Q9BZA8	1340 aa		20.16	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	RTL1	A6NKG5	1358 aa		20.16	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	20.15	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	TESK2	Q96S53	571 aa		20.15	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	WWC3	Q9ULE0	1092 aa		20.15	■□□□□ 0.82
RUNX1T1-238	ENST00000521902	FYB1	O15117	783 aa		20.14	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	CYP27B1	O15528	508 aa		20.14	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	SMIM5	Q71RC9	77 aa		20.14	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	PHF14	O94880	888 aa		20.13	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	HSP90AB2P	Q58FF8	381 aa		20.13	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	SLC24A1	O60721	1099 aa		20.12	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	SSFA2	P28290	1259 aa		20.12	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	APLP1	P51693	650 aa		20.12	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	PIGB	Q92521	554 aa		20.12	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	DNAJC5G	Q8N7S2	189 aa		20.11	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	GGNBP2	Q9H3C7	697 aa		20.11	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	SMG6	Q86US8	1419 aa	Known RBP	20.1	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	INSR	P06213	1382 aa		20.1	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	ST20-MTHFS	A0A0A6YYL1	179 aa		20.1	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	NKX1-1	Q15270	411 aa	Predicted RBP	20.1	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	LOC102724428	A0A0B4J2F2	783 aa		20.09	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	SIK1	P57059	783 aa		20.09	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	NSD3	Q9BZ95	1437 aa		20.09	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	TOMM70	O94826	608 aa		20.08	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	LINC00116	Q8NCU8	138 aa		20.08	■□□□□ 0.81
RUNX1T1-238	ENST00000521902	C5	P01031	1676 aa		20.07	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	TGFB2	P61812	414 aa		20.05	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	RGPD2	P0DJD1	1756 aa		20.05	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	KIF24	Q5T7B8	1368 aa		20.05	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	C4B	P0C0L5	1744 aa		20.05	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	GNPAT	O15228	680 aa		20.04	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	MMP10	P09238	476 aa		20.04	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	ITPK1	Q13572	414 aa		20.04	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	FLT4	P35916	1363 aa		20.04	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	SPG7	Q9UQ90	795 aa		20.03	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	ATP6V1A	P38606	617 aa		20.02	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	ASAP1	Q9ULH1	1129 aa		20.02	■□□□□ 0.8
RUNX1T1-238	ENST00000521902	BCS1L	Q9Y276	419 aa		20.02	■□□□□ 0.8
RUNX1T1-238	ENST00000521902		A0A0G2JLW4	131 aa		20.01	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	20.01	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	TMOD3	Q9NYL9	352 aa		20.01	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	ARHGAP27	Q6ZUM4	889 aa		20	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	NLGN1	Q8N2Q7	840 aa		20	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	TRAPPC3L	Q5T215	181 aa		19.99	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	NMRK2	Q9NPI5	230 aa		19.99	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	ATG3	Q9NT62	314 aa		19.99	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	TAF1L	Q8IZX4	1826 aa		19.99	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	TOGARAM1	Q9Y4F4	1720 aa		19.99	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	PXDNL	A1KZ92	1463 aa		19.99	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	TONSL	Q96HA7	1378 aa		19.98	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	TMF1	P82094	1093 aa		19.98	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	EMILIN1	Q9Y6C2	1016 aa		19.98	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	RBM46	Q8TBY0	533 aa	Known RBP	19.97	■□□□□ 0.79
RUNX1T1-238	ENST00000521902	RTCB	Q9Y3I0	505 aa	Known RBP	19.97	■□□□□ 0.79

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms