RNA–Protein interactions for RNA: ENST00000521477.5

DENND3-216, Transcript of DENN domain containing 3, humanhuman

TSL 3

Gene DENND3, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-216ENST00000521477 SF3B2Q13435 895 aaKnown RBP15.99■□□□□ 0.15
DENND3-216ENST00000521477 PCDH11XQ9BZA7 1347 aa15.98■□□□□ 0.15
DENND3-216ENST00000521477 PCDH11YQ9BZA8 1340 aa15.98■□□□□ 0.15
DENND3-216ENST00000521477 ZCRB1Q8TBF4 217 aaKnown RBP15.98■□□□□ 0.15
DENND3-216ENST00000521477 NUDCQ9Y266 331 aa15.98■□□□□ 0.15
DENND3-216ENST00000521477 SPG7Q9UQ90 795 aa15.97■□□□□ 0.15
DENND3-216ENST00000521477 AMOTQ4VCS5 1084 aa15.96■□□□□ 0.15
DENND3-216ENST00000521477 SHANK3Q9BYB0 1731 aa15.96■□□□□ 0.15
DENND3-216ENST00000521477 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
DENND3-216ENST00000521477 RGPD3A6NKT7 1758 aaPredicted RBP15.95■□□□□ 0.14
DENND3-216ENST00000521477 RGPD4Q7Z3J3 1758 aa15.95■□□□□ 0.14
DENND3-216ENST00000521477 MARCH10Q8NA82 808 aaPredicted RBP15.95■□□□□ 0.14
DENND3-216ENST00000521477 SBF2Q86WG5 1849 aa15.95■□□□□ 0.14
DENND3-216ENST00000521477 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
DENND3-216ENST00000521477 USHBP1Q8N6Y0 703 aa15.94■□□□□ 0.14
DENND3-216ENST00000521477 NHSQ6T4R5 1651 aa15.94■□□□□ 0.14
DENND3-216ENST00000521477 BAG6P46379 1132 aa15.93■□□□□ 0.14
DENND3-216ENST00000521477 HSP90AB1P08238 724 aaKnown RBP15.92■□□□□ 0.14
DENND3-216ENST00000521477 PLEKHO1Q53GL0 409 aaPredicted RBP15.92■□□□□ 0.14
DENND3-216ENST00000521477 BCL11BQ9C0K0 894 aaPredicted RBP15.92■□□□□ 0.14
DENND3-216ENST00000521477 PRKRIP1Q9H875 184 aaPredicted RBP15.92■□□□□ 0.14
DENND3-216ENST00000521477 SULT6B1Q6IMI4 303 aa15.91■□□□□ 0.14
DENND3-216ENST00000521477 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
DENND3-216ENST00000521477 CNGB1Q14028 1251 aaPredicted RBP15.9■□□□□ 0.14
DENND3-216ENST00000521477 NKX1-1Q15270 411 aaPredicted RBP15.9■□□□□ 0.14
DENND3-216ENST00000521477 IFNL2Q8IZJ0 200 aa15.9■□□□□ 0.14
DENND3-216ENST00000521477 PNNQ9H307 717 aaKnown RBP15.9■□□□□ 0.14
DENND3-216ENST00000521477 TRIM37O94972 964 aa15.88■□□□□ 0.13
DENND3-216ENST00000521477 DDX54Q8TDD1 881 aaKnown RBP15.88■□□□□ 0.13
DENND3-216ENST00000521477 U2SURPO15042 1029 aaKnown RBP15.87■□□□□ 0.13
DENND3-216ENST00000521477 PLSCR1O15162 318 aa15.87■□□□□ 0.13
DENND3-216ENST00000521477 FCHSD2O94868 740 aa15.87■□□□□ 0.13
DENND3-216ENST00000521477 FAM182BQ5T319 152 aa15.87■□□□□ 0.13
DENND3-216ENST00000521477 DOT1LQ8TEK3 1739 aa15.87■□□□□ 0.13
DENND3-216ENST00000521477 CYP27B1O15528 508 aa15.86■□□□□ 0.13
DENND3-216ENST00000521477 ANP32CO43423 234 aa15.86■□□□□ 0.13
DENND3-216ENST00000521477 PHKG2P15735 406 aa15.86■□□□□ 0.13
DENND3-216ENST00000521477 C1orf141Q5JVX7 400 aa15.86■□□□□ 0.13
DENND3-216ENST00000521477 NEFMP07197 916 aa15.85■□□□□ 0.13
DENND3-216ENST00000521477 AEBP1Q8IUX7 1158 aa15.85■□□□□ 0.13
DENND3-216ENST00000521477 GAS2L2Q8NHY3 880 aa15.85■□□□□ 0.13
DENND3-216ENST00000521477 DCAF5Q96JK2 942 aa15.85■□□□□ 0.13
DENND3-216ENST00000521477 APBA3O96018 575 aa15.84■□□□□ 0.13
DENND3-216ENST00000521477 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
DENND3-216ENST00000521477 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.13
DENND3-216ENST00000521477 AKAP4Q5JQC9 854 aa15.84■□□□□ 0.13
DENND3-216ENST00000521477 ZNF530Q6P9A1 599 aaPredicted RBP15.84■□□□□ 0.13
DENND3-216ENST00000521477 RREB1Q92766 1687 aa15.83■□□□□ 0.13
DENND3-216ENST00000521477 BTAF1O14981 1849 aa15.83■□□□□ 0.12
DENND3-216ENST00000521477 ERVV-2B6SEH9 535 aa15.83■□□□□ 0.12
DENND3-216ENST00000521477 HMOX1P09601 288 aa15.83■□□□□ 0.12
DENND3-216ENST00000521477 RSPH6AQ9H0K4 717 aa15.83■□□□□ 0.12
DENND3-216ENST00000521477 CAMKK2Q96RR4 588 aa15.81■□□□□ 0.12
DENND3-216ENST00000521477 ADAMTS7Q9UKP4 1686 aa15.81■□□□□ 0.12
DENND3-216ENST00000521477 TOGARAM1Q9Y4F4 1720 aa15.8■□□□□ 0.12
DENND3-216ENST00000521477 SMARCC1Q92922 1105 aaPredicted RBP15.8■□□□□ 0.12
DENND3-216ENST00000521477 KAT6BQ8WYB5 2073 aa15.8■□□□□ 0.12
DENND3-216ENST00000521477 ITGB4P16144 1822 aa15.8■□□□□ 0.12
DENND3-216ENST00000521477 SCN11AQ9UI33 1791 aa15.8■□□□□ 0.12
DENND3-216ENST00000521477 MRC1P22897 1456 aa15.79■□□□□ 0.12
DENND3-216ENST00000521477 PRKAR2BP31323 418 aa15.79■□□□□ 0.12
DENND3-216ENST00000521477 PRIM1P49642 420 aaKnown RBP15.79■□□□□ 0.12
DENND3-216ENST00000521477 WDR43Q15061 677 aaKnown RBP eCLIP15.79■□□□□ 0.12
DENND3-216ENST00000521477 SLC27A3Q5K4L6 730 aa15.79■□□□□ 0.12
DENND3-216ENST00000521477 ACSBG1Q96GR2 724 aa15.79■□□□□ 0.12
DENND3-216ENST00000521477 MAP3K5Q99683 1374 aa15.78■□□□□ 0.12
DENND3-216ENST00000521477 DEFB132Q7Z7B7 95 aa15.78■□□□□ 0.12
DENND3-216ENST00000521477 TMOD3Q9NYL9 352 aa15.78■□□□□ 0.12
DENND3-216ENST00000521477 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.12
DENND3-216ENST00000521477 LY75O60449 1722 aa15.77■□□□□ 0.12
DENND3-216ENST00000521477 KCNQ2O43526 872 aa15.77■□□□□ 0.12
DENND3-216ENST00000521477 HTATSF1O43719 755 aaKnown RBP15.77■□□□□ 0.12
DENND3-216ENST00000521477 EN1Q05925 392 aaPredicted RBP15.77■□□□□ 0.12
DENND3-216ENST00000521477 MTHFSDQ2M296 383 aaKnown RBP15.77■□□□□ 0.12
DENND3-216ENST00000521477 SYTL4Q96C24 671 aaPredicted RBP15.77■□□□□ 0.12
DENND3-216ENST00000521477 NUP188Q5SRE5 1749 aa15.77■□□□□ 0.11
DENND3-216ENST00000521477 MAPK8IP3Q9UPT6 1336 aa15.76■□□□□ 0.11
DENND3-216ENST00000521477 GNAT3A8MTJ3 354 aa15.76■□□□□ 0.11
DENND3-216ENST00000521477 ZNF831Q5JPB2 1677 aa15.76■□□□□ 0.11
DENND3-216ENST00000521477 NBPF14Q5TI25 921 aa15.75■□□□□ 0.11
DENND3-216ENST00000521477 VIRMAQ69YN4 1812 aaKnown RBP15.74■□□□□ 0.11
DENND3-216ENST00000521477 CABP4P57796 275 aa15.74■□□□□ 0.11
DENND3-216ENST00000521477 EZH2Q15910 746 aaKnown RBP15.74■□□□□ 0.11
DENND3-216ENST00000521477 PLEKHF1Q96S99 279 aa15.74■□□□□ 0.11
DENND3-216ENST00000521477 TXNRD1Q16881 649 aa15.73■□□□□ 0.11
DENND3-216ENST00000521477 MPRIPQ6WCQ1 1025 aa15.73■□□□□ 0.11
DENND3-216ENST00000521477 PIGBQ92521 554 aa15.73■□□□□ 0.11
DENND3-216ENST00000521477 CEMIPQ8WUJ3 1361 aa15.73■□□□□ 0.11
DENND3-216ENST00000521477 PALLDQ8WX93 1383 aa15.73■□□□□ 0.11
DENND3-216ENST00000521477 RNMTO43148 476 aaKnown RBP15.72■□□□□ 0.11
DENND3-216ENST00000521477 LMOD3Q0VAK6 560 aa15.72■□□□□ 0.11
DENND3-216ENST00000521477 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
DENND3-216ENST00000521477 SLC52A2Q9HAB3 445 aa15.72■□□□□ 0.11
DENND3-216ENST00000521477 PAPPAQ13219 1627 aa15.72■□□□□ 0.11
DENND3-216ENST00000521477 CICQ96RK0 1608 aaPredicted RBP15.72■□□□□ 0.11
DENND3-216ENST00000521477 NFE2L2Q16236 605 aa15.71■□□□□ 0.11
DENND3-216ENST00000521477 PTF1AQ7RTS3 328 aa15.71■□□□□ 0.11
DENND3-216ENST00000521477 PHACTR3Q96KR7 559 aa15.71■□□□□ 0.11
DENND3-216ENST00000521477 RUNDC1Q96C34 613 aa15.7■□□□□ 0.1
DENND3-216ENST00000521477 TEFQ10587 303 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms