RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 THEMISQ8N1K5 641 aaPredicted RBP21.56■■□□□ 1.04
TRAM1-205ENST00000521425 LGR6Q9HBX8 967 aa21.56■■□□□ 1.04
TRAM1-205ENST00000521425 ZNF330Q9Y3S2 320 aaPredicted RBP21.56■■□□□ 1.04
TRAM1-205ENST00000521425 LRRC7Q96NW7 1537 aa21.56■■□□□ 1.04
TRAM1-205ENST00000521425 IL16Q14005 1332 aa21.56■■□□□ 1.04
TRAM1-205ENST00000521425 ARHGEF28Q8N1W1 1705 aaKnown RBP21.56■■□□□ 1.04
TRAM1-205ENST00000521425 NUTM1Q86Y26 1132 aa21.56■■□□□ 1.04
TRAM1-205ENST00000521425 ZC3H13Q5T200 1668 aaKnown RBP21.55■■□□□ 1.04
TRAM1-205ENST00000521425 CABLES1Q8TDN4 633 aa21.55■■□□□ 1.04
TRAM1-205ENST00000521425 CLTCQ00610 1675 aaKnown RBP21.55■■□□□ 1.04
TRAM1-205ENST00000521425 HDGFL1Q5TGJ6 251 aa21.54■■□□□ 1.04
TRAM1-205ENST00000521425 SHPRHQ149N8 1683 aa21.54■■□□□ 1.04
TRAM1-205ENST00000521425 EDC4Q6P2E9 1401 aaKnown RBP21.54■■□□□ 1.04
TRAM1-205ENST00000521425 GSPT1P15170 499 aaKnown RBP21.53■■□□□ 1.04
TRAM1-205ENST00000521425 KIAA1210Q9ULL0 1709 aa21.53■■□□□ 1.04
TRAM1-205ENST00000521425 MSH6P52701 1360 aa21.53■■□□□ 1.04
TRAM1-205ENST00000521425 TEFQ10587 303 aa21.52■■□□□ 1.04
TRAM1-205ENST00000521425 LRRFIP2Q9Y608 721 aaKnown RBP21.52■■□□□ 1.04
TRAM1-205ENST00000521425 CSB-PGBD3P0DP91 1061 aa21.52■■□□□ 1.04
TRAM1-205ENST00000521425 L1TD1Q5T7N2 865 aaKnown RBP21.51■■□□□ 1.03
TRAM1-205ENST00000521425 ANO2Q9NQ90 1003 aa21.51■■□□□ 1.03
TRAM1-205ENST00000521425 TMEM131LA2VDJ0 1609 aa21.51■■□□□ 1.03
TRAM1-205ENST00000521425 PLEKHM2Q8IWE5 1019 aa21.5■■□□□ 1.03
TRAM1-205ENST00000521425 GCC1Q96CN9 775 aa21.5■■□□□ 1.03
TRAM1-205ENST00000521425 PNMA6EA0A0J9YXQ4 647 aa21.5■■□□□ 1.03
TRAM1-205ENST00000521425 FLIIQ13045 1269 aa21.5■■□□□ 1.03
TRAM1-205ENST00000521425 PNPLA6Q8IY17 1366 aa21.5■■□□□ 1.03
TRAM1-205ENST00000521425 FAM135BQ49AJ0 1406 aa21.5■■□□□ 1.03
TRAM1-205ENST00000521425 CFAP74Q9C0B2 1584 aa21.5■■□□□ 1.03
TRAM1-205ENST00000521425 CHL1O00533 1208 aa21.5■■□□□ 1.03
TRAM1-205ENST00000521425 PRAMEF22A3QJZ6 481 aa21.49■■□□□ 1.03
TRAM1-205ENST00000521425 SDSP20132 328 aa21.49■■□□□ 1.03
TRAM1-205ENST00000521425 CEP85Q6P2H3 762 aa21.49■■□□□ 1.03
TRAM1-205ENST00000521425 UPF3BQ9BZI7 483 aaKnown RBP21.49■■□□□ 1.03
TRAM1-205ENST00000521425 GNAT3A8MTJ3 354 aa21.49■■□□□ 1.03
TRAM1-205ENST00000521425 SURF6O75683 361 aaKnown RBP21.49■■□□□ 1.03
TRAM1-205ENST00000521425 NLRP1Q9C000 1473 aa21.49■■□□□ 1.03
TRAM1-205ENST00000521425 PREX1Q8TCU6 1659 aa21.49■■□□□ 1.03
TRAM1-205ENST00000521425 IFT172Q9UG01 1749 aa21.49■■□□□ 1.03
TRAM1-205ENST00000521425 TRAK2O60296 914 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 ZNF853P0CG23 659 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 IL17REQ8NFR9 667 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 PHF8Q9UPP1 1060 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 MYO3AQ8NEV4 1616 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 SLC39A6Q13433 755 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 ZNF530Q6P9A1 599 aaPredicted RBP21.48■■□□□ 1.03
TRAM1-205ENST00000521425 CHMP5Q9NZZ3 219 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 CDC45O75419 566 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 SSFA2P28290 1259 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 MCM4P33991 863 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 CHRNA2Q15822 529 aa21.48■■□□□ 1.03
TRAM1-205ENST00000521425 GOLGA6L3A6NEY3 463 aa21.47■■□□□ 1.03
TRAM1-205ENST00000521425 MYL6BP14649 208 aa21.47■■□□□ 1.03
TRAM1-205ENST00000521425 NBPF6Q5VWK0 638 aa21.47■■□□□ 1.03
TRAM1-205ENST00000521425 NBPF4Q96M43 638 aa21.47■■□□□ 1.03
TRAM1-205ENST00000521425 NLRP2Q9NX02 1062 aa21.47■■□□□ 1.03
TRAM1-205ENST00000521425 RIMBP3CA6NJZ7 1639 aa21.47■■□□□ 1.03
TRAM1-205ENST00000521425 RIMBP3BA6NNM3 1639 aa21.47■■□□□ 1.03
TRAM1-205ENST00000521425 RIMBP3Q9UFD9 1639 aa21.47■■□□□ 1.03
TRAM1-205ENST00000521425 GAS2L2Q8NHY3 880 aa21.47■■□□□ 1.03
TRAM1-205ENST00000521425 SIL1Q9H173 461 aa21.47■■□□□ 1.03
TRAM1-205ENST00000521425 HOXC9P31274 260 aa21.46■■□□□ 1.03
TRAM1-205ENST00000521425 ZFYVE9O95405 1425 aa21.46■■□□□ 1.03
TRAM1-205ENST00000521425 PKP1Q13835 747 aa21.45■■□□□ 1.02
TRAM1-205ENST00000521425 TAF7Q15545 349 aaPredicted RBP21.45■■□□□ 1.02
TRAM1-205ENST00000521425 CHMP4BQ9H444 224 aaKnown RBP21.45■■□□□ 1.02
TRAM1-205ENST00000521425 COL3A1P02461 1466 aaPredicted RBP21.45■■□□□ 1.02
TRAM1-205ENST00000521425 AAMPQ13685 434 aa21.45■■□□□ 1.02
TRAM1-205ENST00000521425 RICTORQ6R327 1708 aa21.44■■□□□ 1.02
TRAM1-205ENST00000521425 MAP2P11137 1827 aaKnown RBP21.44■■□□□ 1.02
TRAM1-205ENST00000521425 BMP2KLQ5H9B9 411 aa21.44■■□□□ 1.02
TRAM1-205ENST00000521425 CHPF2Q9P2E5 772 aa21.44■■□□□ 1.02
TRAM1-205ENST00000521425 TNPO1Q92973 898 aaKnown RBP21.44■■□□□ 1.02
TRAM1-205ENST00000521425 PI4KAP2A4QPH2 592 aa21.43■■□□□ 1.02
TRAM1-205ENST00000521425 UBTFL1P0CB47 393 aaPredicted RBP21.43■■□□□ 1.02
TRAM1-205ENST00000521425 XRCC6P12956 609 aaKnown RBP eCLIP21.43■■□□□ 1.02
TRAM1-205ENST00000521425 NEK4P51957 841 aa21.43■■□□□ 1.02
TRAM1-205ENST00000521425 PI4KAP1Q8N8J0 262 aa21.43■■□□□ 1.02
TRAM1-205ENST00000521425 PPP6R1Q9UPN7 881 aa21.43■■□□□ 1.02
TRAM1-205ENST00000521425 CASC1Q6TDU7 716 aa21.43■■□□□ 1.02
TRAM1-205ENST00000521425 HMMRO75330 724 aa21.42■■□□□ 1.02
TRAM1-205ENST00000521425 GNAI2P04899 355 aa21.42■■□□□ 1.02
TRAM1-205ENST00000521425 MCTP1Q6DN14 999 aa21.42■■□□□ 1.02
TRAM1-205ENST00000521425 PROSER2Q86WR7 435 aaPredicted RBP21.42■■□□□ 1.02
TRAM1-205ENST00000521425 HAP1P54257 671 aaPredicted RBP21.42■■□□□ 1.02
TRAM1-205ENST00000521425 ZGPATQ8N5A5 531 aaKnown RBP21.42■■□□□ 1.02
TRAM1-205ENST00000521425 ANTXR1Q9H6X2 564 aa21.42■■□□□ 1.02
TRAM1-205ENST00000521425 SRGAP3O43295 1099 aa21.42■■□□□ 1.02
TRAM1-205ENST00000521425 ABCC4O15439 1325 aa21.42■■□□□ 1.02
TRAM1-205ENST00000521425 CCDC30Q5VVM6 783 aa21.41■■□□□ 1.02
TRAM1-205ENST00000521425 MPNDQ8N594 471 aa21.41■■□□□ 1.02
TRAM1-205ENST00000521425 CPSF1Q10570 1443 aaKnown RBP21.41■■□□□ 1.02
TRAM1-205ENST00000521425 ANKRD44Q8N8A2 993 aa21.4■■□□□ 1.02
TRAM1-205ENST00000521425 DCTPP1Q9H773 170 aa21.4■■□□□ 1.02
TRAM1-205ENST00000521425 PLEKHG3A1L390 1219 aa21.4■■□□□ 1.02
TRAM1-205ENST00000521425 ANKLE2Q86XL3 938 aa21.4■■□□□ 1.02
TRAM1-205ENST00000521425 PA2G4Q9UQ80 394 aaKnown RBP21.4■■□□□ 1.02
TRAM1-205ENST00000521425 BTBD11A6QL63 1104 aa21.39■■□□□ 1.02
TRAM1-205ENST00000521425 NBPF7P0C2Y1 421 aaPredicted RBP21.39■■□□□ 1.02
TRAM1-205ENST00000521425 TTC22Q5TAA0 569 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms