RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 SHANK3Q9BYB0 1731 aa28.43■■■□□ 2.14
SNHG6-205ENST00000521399 MEGF6O75095 1541 aa28.43■■■□□ 2.14
SNHG6-205ENST00000521399 TRIM26Q12899 539 aaPredicted RBP28.42■■■□□ 2.14
SNHG6-205ENST00000521399 DOT1LQ8TEK3 1739 aa28.41■■■□□ 2.14
SNHG6-205ENST00000521399 NBPF6Q5VWK0 638 aa28.41■■■□□ 2.14
SNHG6-205ENST00000521399 NBPF4Q96M43 638 aa28.41■■■□□ 2.14
SNHG6-205ENST00000521399 ARXQ96QS3 562 aa28.41■■■□□ 2.14
SNHG6-205ENST00000521399 QSER1Q2KHR3 1735 aa28.39■■■□□ 2.14
SNHG6-205ENST00000521399 NSD2O96028 1365 aa28.38■■■□□ 2.13
SNHG6-205ENST00000521399 CDCA8Q53HL2 280 aa28.38■■■□□ 2.13
SNHG6-205ENST00000521399 LY75O60449 1722 aa28.37■■■□□ 2.13
SNHG6-205ENST00000521399 CGNL1Q0VF96 1302 aa28.37■■■□□ 2.13
SNHG6-205ENST00000521399 SMG6Q86US8 1419 aaKnown RBP28.36■■■□□ 2.13
SNHG6-205ENST00000521399 USHBP1Q8N6Y0 703 aa28.36■■■□□ 2.13
SNHG6-205ENST00000521399 SLC16A10Q8TF71 515 aa28.36■■■□□ 2.13
SNHG6-205ENST00000521399 KIF20BQ96Q89 1820 aa28.36■■■□□ 2.13
SNHG6-205ENST00000521399 MAP3K5Q99683 1374 aa28.36■■■□□ 2.13
SNHG6-205ENST00000521399 KCNQ4P56696 695 aa28.35■■■□□ 2.13
SNHG6-205ENST00000521399 PNPLA7Q6ZV29 1317 aa28.35■■■□□ 2.13
SNHG6-205ENST00000521399 RAPGEF4Q8WZA2 1011 aa28.34■■■□□ 2.13
SNHG6-205ENST00000521399 HSP90AB2PQ58FF8 381 aa28.33■■■□□ 2.13
SNHG6-205ENST00000521399 TFCP2L1Q9NZI6 479 aa28.33■■■□□ 2.13
SNHG6-205ENST00000521399 INSRP06213 1382 aa28.33■■■□□ 2.13
SNHG6-205ENST00000521399 TUBGCP6Q96RT7 1819 aa28.32■■■□□ 2.12
SNHG6-205ENST00000521399 FLT4P35916 1363 aa28.32■■■□□ 2.12
SNHG6-205ENST00000521399 KIF24Q5T7B8 1368 aa28.32■■■□□ 2.12
SNHG6-205ENST00000521399 COL24A1Q17RW2 1714 aa28.31■■■□□ 2.12
SNHG6-205ENST00000521399 TATP17735 454 aaPredicted RBP28.3■■■□□ 2.12
SNHG6-205ENST00000521399 CCNL1Q9UK58 526 aaPredicted RBP28.3■■■□□ 2.12
SNHG6-205ENST00000521399 CHD4Q14839 1912 aa28.3■■■□□ 2.12
SNHG6-205ENST00000521399 POLD1P28340 1107 aa28.29■■■□□ 2.12
SNHG6-205ENST00000521399 CARD14Q9BXL6 1004 aa28.29■■■□□ 2.12
SNHG6-205ENST00000521399 GOLGB1Q14789 3259 aaKnown RBP28.27■■■□□ 2.12
SNHG6-205ENST00000521399 PCDH11XQ9BZA7 1347 aa28.26■■■□□ 2.11
SNHG6-205ENST00000521399 PCDH11YQ9BZA8 1340 aa28.26■■■□□ 2.11
SNHG6-205ENST00000521399 NSD3Q9BZ95 1437 aa28.25■■■□□ 2.11
SNHG6-205ENST00000521399 ZNF784Q8NCA9 323 aaPredicted RBP28.24■■■□□ 2.11
SNHG6-205ENST00000521399 TIMELESSQ9UNS1 1208 aa28.24■■■□□ 2.11
SNHG6-205ENST00000521399 EMILIN1Q9Y6C2 1016 aa28.23■■■□□ 2.11
SNHG6-205ENST00000521399 KLHL34Q8N239 644 aa28.22■■■□□ 2.11
SNHG6-205ENST00000521399 CYP27B1O15528 508 aa28.2■■■□□ 2.1
SNHG6-205ENST00000521399 GPR162Q16538 588 aa28.19■■■□□ 2.1
SNHG6-205ENST00000521399 COL23A1Q86Y22 540 aaPredicted RBP28.19■■■□□ 2.1
SNHG6-205ENST00000521399 C5P01031 1676 aa28.17■■■□□ 2.1
SNHG6-205ENST00000521399 MSH5O43196 834 aa28.17■■■□□ 2.1
SNHG6-205ENST00000521399 MPRIPQ6WCQ1 1025 aa28.17■■■□□ 2.1
SNHG6-205ENST00000521399 NCAPD2Q15021 1401 aa28.17■■■□□ 2.1
SNHG6-205ENST00000521399 PALLDQ8WX93 1383 aa28.16■■■□□ 2.1
SNHG6-205ENST00000521399 PKD1L3Q7Z443 1732 aa28.16■■■□□ 2.1
SNHG6-205ENST00000521399 ANKRD26Q9UPS8 1709 aa28.16■■■□□ 2.1
SNHG6-205ENST00000521399 PPM1GO15355 546 aaPredicted RBP28.16■■■□□ 2.1
SNHG6-205ENST00000521399 HMGB2P26583 209 aaKnown RBP28.16■■■□□ 2.1
SNHG6-205ENST00000521399 MAP2P11137 1827 aaKnown RBP28.15■■■□□ 2.1
SNHG6-205ENST00000521399 ITGB4P16144 1822 aa28.15■■■□□ 2.1
SNHG6-205ENST00000521399 TAF1LQ8IZX4 1826 aa28.15■■■□□ 2.1
SNHG6-205ENST00000521399 WASHC2AQ641Q2 1341 aa28.15■■■□□ 2.1
SNHG6-205ENST00000521399 TOGARAM1Q9Y4F4 1720 aa28.15■■■□□ 2.1
SNHG6-205ENST00000521399 NLGN2Q8NFZ4 835 aa28.13■■■□□ 2.09
SNHG6-205ENST00000521399 CLSPNQ9HAW4 1339 aa28.13■■■□□ 2.09
SNHG6-205ENST00000521399 NKX1-1Q15270 411 aaPredicted RBP28.11■■■□□ 2.09
SNHG6-205ENST00000521399 SMARCC1Q92922 1105 aaPredicted RBP28.11■■■□□ 2.09
SNHG6-205ENST00000521399 SPG7Q9UQ90 795 aa28.11■■■□□ 2.09
SNHG6-205ENST00000521399 PELP1Q8IZL8 1130 aaKnown RBP28.1■■■□□ 2.09
SNHG6-205ENST00000521399 FLAD1Q8NFF5 587 aa28.1■■■□□ 2.09
SNHG6-205ENST00000521399 EYA1Q99502 592 aa28.1■■■□□ 2.09
SNHG6-205ENST00000521399 MSL1Q68DK7 614 aa28.09■■■□□ 2.09
SNHG6-205ENST00000521399 POLKQ9UBT6 870 aa28.09■■■□□ 2.09
SNHG6-205ENST00000521399 PIGBQ92521 554 aa28.08■■■□□ 2.09
SNHG6-205ENST00000521399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.07■■■□□ 2.085e-10■□□□□ 10.5
SNHG6-205ENST00000521399 C4BP0C0L5 1744 aa28.06■■■□□ 2.08
SNHG6-205ENST00000521399 POLR3GLQ9BT43 218 aa28.05■■■□□ 2.08
SNHG6-205ENST00000521399 PCGF6Q9BYE7 350 aa28.05■■■□□ 2.08
SNHG6-205ENST00000521399 AK7Q96M32 723 aa28.03■■■□□ 2.08
SNHG6-205ENST00000521399 YBX3P16989 372 aaKnown RBP eCLIP28.02■■■□□ 2.08
SNHG6-205ENST00000521399 UBR3Q6ZT12 1888 aa28.02■■■□□ 2.08
SNHG6-205ENST00000521399 GRIN3BO60391 1043 aa28.01■■■□□ 2.07
SNHG6-205ENST00000521399 AMIGO3Q86WK7 504 aa28.01■■■□□ 2.07
SNHG6-205ENST00000521399 IFNL2Q8IZJ0 200 aa28.01■■■□□ 2.07
SNHG6-205ENST00000521399 LOC102724428A0A0B4J2F2 783 aa28■■■□□ 2.07
SNHG6-205ENST00000521399 PHKG2P15735 406 aa28■■■□□ 2.07
SNHG6-205ENST00000521399 TNNT2P45379 298 aaPredicted RBP28■■■□□ 2.07
SNHG6-205ENST00000521399 SIK1P57059 783 aa28■■■□□ 2.07
SNHG6-205ENST00000521399 EIF4A2Q14240 407 aaKnown RBP28■■■□□ 2.07
SNHG6-205ENST00000521399 TMOD3Q9NYL9 352 aa28■■■□□ 2.07
SNHG6-205ENST00000521399 CD2APQ9Y5K6 639 aa28■■■□□ 2.07
SNHG6-205ENST00000521399 PHF14O94880 888 aa27.97■■■□□ 2.07
SNHG6-205ENST00000521399 C1QTNF8P60827 252 aa27.97■■■□□ 2.07
SNHG6-205ENST00000521399 EIF4G2P78344 907 aaKnown RBP eCLIP27.97■■■□□ 2.07
SNHG6-205ENST00000521399 LINC00116Q8NCU8 138 aa27.97■■■□□ 2.07
SNHG6-205ENST00000521399 ASAP1Q9ULH1 1129 aa27.97■■■□□ 2.07
SNHG6-205ENST00000521399 PLEKHG2Q9H7P9 1386 aa27.97■■■□□ 2.07
SNHG6-205ENST00000521399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.96■■■□□ 2.07
SNHG6-205ENST00000521399 SMIM5Q71RC9 77 aa27.96■■■□□ 2.07
SNHG6-205ENST00000521399 HSPA5P11021 654 aaKnown RBP27.95■■■□□ 2.06
SNHG6-205ENST00000521399 SSFA2P28290 1259 aa27.95■■■□□ 2.06
SNHG6-205ENST00000521399 PANK3Q9H999 370 aa27.94■■■□□ 2.06
SNHG6-205ENST00000521399 IGSF1Q8N6C5 1336 aa27.93■■■□□ 2.06
SNHG6-205ENST00000521399 ITPK1Q13572 414 aa27.93■■■□□ 2.06
SNHG6-205ENST00000521399 ATP6V1AP38606 617 aa27.92■■■□□ 2.06
SNHG6-205ENST00000521399 ATG3Q9NT62 314 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms