RNA–Protein interactions for RNA: ENST00000521379.1

CRNKL1-206, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 5

Gene CRNKL1, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-206ENST00000521379 USP17L2Q6R6M4 530 aa11.96□□□□□ -0.49
CRNKL1-206ENST00000521379 USP17L1Q7RTZ2 530 aa11.96□□□□□ -0.49
CRNKL1-206ENST00000521379 SERPINA10Q9UK55 444 aa11.96□□□□□ -0.49
CRNKL1-206ENST00000521379 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
CRNKL1-206ENST00000521379 CFAP70Q5T0N1 1121 aa11.95□□□□□ -0.5
CRNKL1-206ENST00000521379 KDF1Q8NAX2 398 aaPredicted RBP11.95□□□□□ -0.5
CRNKL1-206ENST00000521379 SUPT5HO00267 1087 aaKnown RBP11.94□□□□□ -0.5
CRNKL1-206ENST00000521379 MRPL14Q6P1L8 145 aaKnown RBP11.94□□□□□ -0.5
CRNKL1-206ENST00000521379 TRIM46Q7Z4K8 759 aa11.94□□□□□ -0.5
CRNKL1-206ENST00000521379 DEPDC4Q8N2C3 294 aa11.94□□□□□ -0.5
CRNKL1-206ENST00000521379 DACH1Q9UI36 760 aa11.94□□□□□ -0.5
CRNKL1-206ENST00000521379 CCDC82Q8N4S0 544 aa11.93□□□□□ -0.5
CRNKL1-206ENST00000521379 CCDC97Q96F63 343 aaPredicted RBP11.93□□□□□ -0.5
CRNKL1-206ENST00000521379 ATP13A2Q9NQ11 1180 aa11.93□□□□□ -0.5
CRNKL1-206ENST00000521379 BMP1P13497 986 aa11.92□□□□□ -0.5
CRNKL1-206ENST00000521379 CYP2U1Q7Z449 544 aa11.92□□□□□ -0.5
CRNKL1-206ENST00000521379 LINC00528Q8N1L1 170 aa11.92□□□□□ -0.5
CRNKL1-206ENST00000521379 TSEN34Q9BSV6 310 aaKnown RBP11.92□□□□□ -0.5
CRNKL1-206ENST00000521379 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
CRNKL1-206ENST00000521379 NOD1Q9Y239 953 aa11.91□□□□□ -0.5
CRNKL1-206ENST00000521379 ATP5J2-PTCD1G3V325 749 aa11.9□□□□□ -0.5
CRNKL1-206ENST00000521379 LMOD1P29536 600 aaPredicted RBP11.9□□□□□ -0.5
CRNKL1-206ENST00000521379 PTGIRP43119 386 aa11.9□□□□□ -0.5
CRNKL1-206ENST00000521379 AGBL1Q96MI9 1066 aa11.9□□□□□ -0.5
CRNKL1-206ENST00000521379 PCDHGA11Q9Y5H2 935 aa11.89□□□□□ -0.51
CRNKL1-206ENST00000521379 SPINT1O43278 529 aa11.88□□□□□ -0.51
CRNKL1-206ENST00000521379 UPP2O95045 317 aa11.88□□□□□ -0.51
CRNKL1-206ENST00000521379 GNRH1P01148 92 aa11.88□□□□□ -0.51
CRNKL1-206ENST00000521379 KANK4Q5T7N3 995 aaPredicted RBP11.88□□□□□ -0.51
CRNKL1-206ENST00000521379 MKRN1Q9UHC7 482 aaKnown RBP11.88□□□□□ -0.51
CRNKL1-206ENST00000521379 RELBQ01201 579 aa11.87□□□□□ -0.51
CRNKL1-206ENST00000521379 SCARF1Q14162 830 aa11.87□□□□□ -0.51
CRNKL1-206ENST00000521379 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
CRNKL1-206ENST00000521379 GTF2IP78347 998 aa11.86□□□□□ -0.51
CRNKL1-206ENST00000521379 ZFP42Q96MM3 310 aa11.86□□□□□ -0.51
CRNKL1-206ENST00000521379 PURBQ96QR8 312 aaKnown RBP11.86□□□□□ -0.51
CRNKL1-206ENST00000521379 BMP2P12643 396 aa11.85□□□□□ -0.51
CRNKL1-206ENST00000521379 SRPK2P78362 688 aaKnown RBP11.85□□□□□ -0.51
CRNKL1-206ENST00000521379 ATP1A2P50993 1020 aa11.84□□□□□ -0.51
CRNKL1-206ENST00000521379 CLDN10P78369 228 aa11.84□□□□□ -0.51
CRNKL1-206ENST00000521379 C6orf118Q5T5N4 469 aa11.84□□□□□ -0.51
CRNKL1-206ENST00000521379 ZNF395Q9H8N7 513 aaPredicted RBP11.84□□□□□ -0.51
CRNKL1-206ENST00000521379 A0A1W2PRU2 124 aa11.83□□□□□ -0.52
CRNKL1-206ENST00000521379 WASLO00401 505 aaPredicted RBP11.83□□□□□ -0.52
CRNKL1-206ENST00000521379 ZBTB7BO15156 539 aaPredicted RBP11.83□□□□□ -0.52
CRNKL1-206ENST00000521379 SCNN1DP51172 638 aa11.83□□□□□ -0.52
CRNKL1-206ENST00000521379 CLN3Q13286 438 aa11.83□□□□□ -0.52
CRNKL1-206ENST00000521379 VRTNQ9H8Y1 702 aa11.83□□□□□ -0.52
CRNKL1-206ENST00000521379 SENP2Q9HC62 589 aa11.83□□□□□ -0.52
CRNKL1-206ENST00000521379 ARHGEF10LQ9HCE6 1279 aa11.83□□□□□ -0.52
CRNKL1-206ENST00000521379 GMPR2Q9P2T1 348 aaKnown RBP11.83□□□□□ -0.52
CRNKL1-206ENST00000521379 RFX1P22670 979 aa11.82□□□□□ -0.52
CRNKL1-206ENST00000521379 OGFOD1Q8N543 542 aa11.82□□□□□ -0.52
CRNKL1-206ENST00000521379 ETNK1Q9HBU6 452 aa11.82□□□□□ -0.52
CRNKL1-206ENST00000521379 IL2RAP01589 272 aa11.81□□□□□ -0.52
CRNKL1-206ENST00000521379 SIX5Q8N196 739 aa11.81□□□□□ -0.52
CRNKL1-206ENST00000521379 LARGE2Q8N3Y3 721 aa11.81□□□□□ -0.52
CRNKL1-206ENST00000521379 KIFC2Q96AC6 838 aa11.81□□□□□ -0.52
CRNKL1-206ENST00000521379 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
CRNKL1-206ENST00000521379 INSM2Q96T92 566 aaPredicted RBP11.81□□□□□ -0.52
CRNKL1-206ENST00000521379 DNAAF2Q9NVR5 837 aaKnown RBP11.81□□□□□ -0.52
CRNKL1-206ENST00000521379 KIAA1024Q9UPX6 916 aa11.81□□□□□ -0.52
CRNKL1-206ENST00000521379 HRH3Q9Y5N1 445 aa11.81□□□□□ -0.52
CRNKL1-206ENST00000521379 SOS2Q07890 1332 aaPredicted RBP11.81□□□□□ -0.52
CRNKL1-206ENST00000521379 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
CRNKL1-206ENST00000521379 TMEM229AB2RXF0 380 aa11.8□□□□□ -0.52
CRNKL1-206ENST00000521379 DKK1O94907 266 aa11.8□□□□□ -0.52
CRNKL1-206ENST00000521379 GDF10P55107 478 aa11.8□□□□□ -0.52
CRNKL1-206ENST00000521379 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
CRNKL1-206ENST00000521379 XAGE2Q96GT9 111 aa11.8□□□□□ -0.52
CRNKL1-206ENST00000521379 ESYT1Q9BSJ8 1104 aa11.8□□□□□ -0.52
CRNKL1-206ENST00000521379 RAB6BQ9NRW1 208 aa11.8□□□□□ -0.52
CRNKL1-206ENST00000521379 STAU1O95793 577 aaKnown RBP11.79□□□□□ -0.52
CRNKL1-206ENST00000521379 INHAP05111 366 aa11.79□□□□□ -0.52
CRNKL1-206ENST00000521379 RASA1P20936 1047 aa11.79□□□□□ -0.52
CRNKL1-206ENST00000521379 GPC1P35052 558 aa11.79□□□□□ -0.52
CRNKL1-206ENST00000521379 CTSOP43234 321 aaPredicted RBP11.79□□□□□ -0.52
CRNKL1-206ENST00000521379 PTK7Q13308 1070 aa11.79□□□□□ -0.52
CRNKL1-206ENST00000521379 PBXIP1Q96AQ6 731 aa11.79□□□□□ -0.52
CRNKL1-206ENST00000521379 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.78□□□□□ -0.52
CRNKL1-206ENST00000521379 RNF144AP50876 292 aaPredicted RBP11.78□□□□□ -0.52
CRNKL1-206ENST00000521379 CRTC2Q53ET0 693 aaPredicted RBP11.78□□□□□ -0.52
CRNKL1-206ENST00000521379 FOXD4L5Q5VV16 416 aaPredicted RBP11.78□□□□□ -0.52
CRNKL1-206ENST00000521379 CNKSR1Q969H4 720 aa11.78□□□□□ -0.52
CRNKL1-206ENST00000521379 TTLL8A6PVC2 850 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L15C9J2P7 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L10C9JJH3 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L12C9JPN9 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L11C9JVI0 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L21D6R901 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L18D6R9N7 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L22D6RA61 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L19D6RCP7 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L20D6RJB6 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 MEN1O00255 615 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 PSME1Q06323 249 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 USP17L24Q0WX57 530 aa11.77□□□□□ -0.53
CRNKL1-206ENST00000521379 CCDC102BQ68D86 513 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms