RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 CTSOP43234 321 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-214ENST00000520947 PROSER2Q86WR7 435 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-214ENST00000520947 DNMT3LQ9UJW3 386 aa10.12□□□□□ -0.79
PTPN12-214ENST00000520947 PIK3CDO00329 1044 aa10.11□□□□□ -0.79
PTPN12-214ENST00000520947 OXLD1Q5BKU9 147 aa10.11□□□□□ -0.79
PTPN12-214ENST00000520947 OSBPL3Q9H4L5 887 aa10.11□□□□□ -0.79
PTPN12-214ENST00000520947 ALG2Q9H553 416 aa10.11□□□□□ -0.79
PTPN12-214ENST00000520947 GTF3C3Q9Y5Q9 886 aa10.11□□□□□ -0.79
PTPN12-214ENST00000520947 MYCP01106 439 aaPredicted RBP10.1□□□□□ -0.79
PTPN12-214ENST00000520947 CYP2U1Q7Z449 544 aa10.09□□□□□ -0.79
PTPN12-214ENST00000520947 ADAMTS19Q8TE59 1207 aa10.09□□□□□ -0.79
PTPN12-214ENST00000520947 MEN1O00255 615 aa10.08□□□□□ -0.8
PTPN12-214ENST00000520947 VEGFBP49765 207 aa10.08□□□□□ -0.8
PTPN12-214ENST00000520947 HDGFL1Q5TGJ6 251 aa10.08□□□□□ -0.8
PTPN12-214ENST00000520947 FNBP4Q8N3X1 1017 aaPredicted RBP10.08□□□□□ -0.8
PTPN12-214ENST00000520947 PLPP7Q8NBV4 271 aa10.08□□□□□ -0.8
PTPN12-214ENST00000520947 A0A1W2PRU2 124 aa10.07□□□□□ -0.8
PTPN12-214ENST00000520947 TERTO14746 1132 aaKnown RBP10.07□□□□□ -0.8
PTPN12-214ENST00000520947 ARHGEF10LQ9HCE6 1279 aa10.07□□□□□ -0.8
PTPN12-214ENST00000520947 RAB6BQ9NRW1 208 aa10.07□□□□□ -0.8
PTPN12-214ENST00000520947 TRAK2O60296 914 aa10.06□□□□□ -0.8
PTPN12-214ENST00000520947 SKIP12755 728 aa10.06□□□□□ -0.8
PTPN12-214ENST00000520947 USP4Q13107 963 aa10.06□□□□□ -0.8
PTPN12-214ENST00000520947 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.06□□□□□ -0.8
PTPN12-214ENST00000520947 LCE2CQ5TA81 110 aa10.06□□□□□ -0.8
PTPN12-214ENST00000520947 FOXD4L5Q5VV16 416 aaPredicted RBP10.06□□□□□ -0.8
PTPN12-214ENST00000520947 NXF1Q9UBU9 619 aaKnown RBP10.06□□□□□ -0.8
PTPN12-214ENST00000520947 CHIC2Q9UKJ5 165 aa10.06□□□□□ -0.8
PTPN12-214ENST00000520947 A6NJR5 290 aa10.05□□□□□ -0.8
PTPN12-214ENST00000520947 RNF217Q8TC41 542 aa10.05□□□□□ -0.8
PTPN12-214ENST00000520947 MAP7D1Q3KQU3 841 aa10.04□□□□□ -0.8
PTPN12-214ENST00000520947 NLRP3Q96P20 1036 aa10.03□□□□□ -0.8
PTPN12-214ENST00000520947 STAU1O95793 577 aaKnown RBP10.02□□□□□ -0.81
PTPN12-214ENST00000520947 PRICKLE2Q7Z3G6 844 aa10.02□□□□□ -0.81
PTPN12-214ENST00000520947 DEPDC4Q8N2C3 294 aa10.02□□□□□ -0.81
PTPN12-214ENST00000520947 GLMNQ92990 594 aa10.02□□□□□ -0.81
PTPN12-214ENST00000520947 SIRT1Q96EB6 747 aa10.02□□□□□ -0.81
PTPN12-214ENST00000520947 WIPF1O43516 503 aa10.01□□□□□ -0.81
PTPN12-214ENST00000520947 GNRH1P01148 92 aa10.01□□□□□ -0.81
PTPN12-214ENST00000520947 PTSQ03393 145 aa10.01□□□□□ -0.81
PTPN12-214ENST00000520947 CLN3Q13286 438 aa10.01□□□□□ -0.81
PTPN12-214ENST00000520947 UCN2Q96RP3 112 aa10.01□□□□□ -0.81
PTPN12-214ENST00000520947 RNF144AP50876 292 aaPredicted RBP10□□□□□ -0.81
PTPN12-214ENST00000520947 SLC27A3Q5K4L6 730 aa10□□□□□ -0.81
PTPN12-214ENST00000520947 TBC1D9Q6ZT07 1266 aa10□□□□□ -0.81
PTPN12-214ENST00000520947 LYSMD3Q7Z3D4 306 aa10□□□□□ -0.81
PTPN12-214ENST00000520947 SLC16A10Q8TF71 515 aa10□□□□□ -0.81
PTPN12-214ENST00000520947 USP17L5A8MUK1 530 aa9.99□□□□□ -0.81
PTPN12-214ENST00000520947 IL2RAP01589 272 aa9.99□□□□□ -0.81
PTPN12-214ENST00000520947 RHOQP17081 205 aa9.99□□□□□ -0.81
PTPN12-214ENST00000520947 NCOA4Q13772 614 aa9.99□□□□□ -0.81
PTPN12-214ENST00000520947 EML3Q32P44 896 aa9.99□□□□□ -0.81
PTPN12-214ENST00000520947 NFATC2IPQ8NCF5 419 aa9.99□□□□□ -0.81
PTPN12-214ENST00000520947 CNKSR1Q969H4 720 aa9.99□□□□□ -0.81
PTPN12-214ENST00000520947 H3BM21 787 aa9.98□□□□□ -0.81
PTPN12-214ENST00000520947 PPFIA3O75145 1194 aa9.98□□□□□ -0.81
PTPN12-214ENST00000520947 CALR3Q96L12 384 aaKnown RBP9.98□□□□□ -0.81
PTPN12-214ENST00000520947 ZNF777Q9ULD5 760 aaPredicted RBP9.98□□□□□ -0.81
PTPN12-214ENST00000520947 GPC1P35052 558 aa9.97□□□□□ -0.81
PTPN12-214ENST00000520947 ESYT1Q9BSJ8 1104 aa9.97□□□□□ -0.81
PTPN12-214ENST00000520947 ETNK1Q9HBU6 452 aa9.97□□□□□ -0.81
PTPN12-214ENST00000520947 ESCO1Q5FWF5 840 aa9.96□□□□□ -0.82
PTPN12-214ENST00000520947 NPAS3Q8IXF0 933 aa9.96□□□□□ -0.82
PTPN12-214ENST00000520947 CCDC155Q8N6L0 562 aa9.96□□□□□ -0.82
PTPN12-214ENST00000520947 NOD1Q9Y239 953 aa9.96□□□□□ -0.82
PTPN12-214ENST00000520947 SLC35F4A4IF30 521 aa9.95□□□□□ -0.82
PTPN12-214ENST00000520947 ATP9BO43861 1147 aa9.95□□□□□ -0.82
PTPN12-214ENST00000520947 INSM1Q01101 510 aaPredicted RBP9.95□□□□□ -0.82
PTPN12-214ENST00000520947 CENPCQ03188 943 aa9.95□□□□□ -0.82
PTPN12-214ENST00000520947 POU4F2Q12837 409 aa9.95□□□□□ -0.82
PTPN12-214ENST00000520947 XAGE2Q96GT9 111 aa9.95□□□□□ -0.82
PTPN12-214ENST00000520947 GRIP2Q9C0E4 1043 aa9.95□□□□□ -0.82
PTPN12-214ENST00000520947 TIMELESSQ9UNS1 1208 aa9.95□□□□□ -0.82
PTPN12-214ENST00000520947 ERBB4Q15303 1308 aa9.94□□□□□ -0.82
PTPN12-214ENST00000520947 SENP3-EIF4A1A0A087X0R7 540 aa9.94□□□□□ -0.82
PTPN12-214ENST00000520947 USP17L3A6NCW0 530 aa9.94□□□□□ -0.82
PTPN12-214ENST00000520947 USP17L4A6NCW7 530 aa9.94□□□□□ -0.82
PTPN12-214ENST00000520947 SCNN1DP51172 638 aa9.94□□□□□ -0.82
PTPN12-214ENST00000520947 GDF10P55107 478 aa9.94□□□□□ -0.82
PTPN12-214ENST00000520947 GTF2IP78347 998 aa9.94□□□□□ -0.82
PTPN12-214ENST00000520947 PSME1Q06323 249 aa9.94□□□□□ -0.82
PTPN12-214ENST00000520947 USP17L2Q6R6M4 530 aa9.94□□□□□ -0.82
PTPN12-214ENST00000520947 USP17L1Q7RTZ2 530 aa9.94□□□□□ -0.82
PTPN12-214ENST00000520947 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
PTPN12-214ENST00000520947 LZTS3O60299 673 aaPredicted RBP9.93□□□□□ -0.82
PTPN12-214ENST00000520947 IRF7Q92985 503 aa9.93□□□□□ -0.82
PTPN12-214ENST00000520947 PCDHGA11Q9Y5H2 935 aa9.93□□□□□ -0.82
PTPN12-214ENST00000520947 ZSCAN10Q96SZ4 725 aaPredicted RBP9.92□□□□□ -0.82
PTPN12-214ENST00000520947 ZMYND15Q9H091 742 aa9.92□□□□□ -0.82
PTPN12-214ENST00000520947 STK17AQ9UEE5 414 aa9.92□□□□□ -0.82
PTPN12-214ENST00000520947 SERTAD1Q9UHV2 236 aa9.92□□□□□ -0.82
PTPN12-214ENST00000520947 HRH3Q9Y5N1 445 aa9.92□□□□□ -0.82
PTPN12-214ENST00000520947 INHAP05111 366 aa9.91□□□□□ -0.82
PTPN12-214ENST00000520947 TLR1Q15399 786 aa9.91□□□□□ -0.82
PTPN12-214ENST00000520947 FHDC1Q9C0D6 1143 aaPredicted RBP9.91□□□□□ -0.82
PTPN12-214ENST00000520947 PALM3A6NDB9 673 aaPredicted RBP9.9□□□□□ -0.82
PTPN12-214ENST00000520947 GMPRP36959 345 aa9.9□□□□□ -0.82
PTPN12-214ENST00000520947 PHKA2P46019 1235 aa9.9□□□□□ -0.82
PTPN12-214ENST00000520947 TMEM214Q6NUQ4 689 aaKnown RBP9.9□□□□□ -0.82
PTPN12-214ENST00000520947 NBPF10Q6P3W6 841 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms