RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 MON2Q7Z3U7 1717 aa18.83■□□□□ 0.61
SRGAP3-212ENST00000520860 DOT1LQ8TEK3 1739 aa18.83■□□□□ 0.61
SRGAP3-212ENST00000520860 NSD2O96028 1365 aa18.83■□□□□ 0.61
SRGAP3-212ENST00000520860 USP47Q96K76 1375 aa18.83■□□□□ 0.61
SRGAP3-212ENST00000520860 USP54Q70EL1 1684 aa18.83■□□□□ 0.61
SRGAP3-212ENST00000520860 APLP1P51693 650 aa18.83■□□□□ 0.6
SRGAP3-212ENST00000520860 LTV1Q96GA3 475 aaPredicted RBP18.82■□□□□ 0.6
SRGAP3-212ENST00000520860 KIF3CO14782 793 aa18.81■□□□□ 0.6
SRGAP3-212ENST00000520860 HMGB2P26583 209 aaKnown RBP18.81■□□□□ 0.6
SRGAP3-212ENST00000520860 FLAD1Q8NFF5 587 aa18.81■□□□□ 0.6
SRGAP3-212ENST00000520860 FAM208AQ9UK61 1670 aaKnown RBP18.79■□□□□ 0.6
SRGAP3-212ENST00000520860 ZCRB1Q8TBF4 217 aaKnown RBP18.79■□□□□ 0.6
SRGAP3-212ENST00000520860 IP6K1Q92551 441 aa18.79■□□□□ 0.6
SRGAP3-212ENST00000520860 SBNO2Q9Y2G9 1366 aa18.79■□□□□ 0.6
SRGAP3-212ENST00000520860 IGSF1Q8N6C5 1336 aa18.78■□□□□ 0.6
SRGAP3-212ENST00000520860 HDGFL2Q7Z4V5 671 aaPredicted RBP18.78■□□□□ 0.6
SRGAP3-212ENST00000520860 WWC3Q9ULE0 1092 aa18.78■□□□□ 0.6
SRGAP3-212ENST00000520860 ROCK2O75116 1388 aaKnown RBP18.76■□□□□ 0.59
SRGAP3-212ENST00000520860 TMC1Q8TDI8 760 aa18.75■□□□□ 0.59
SRGAP3-212ENST00000520860 EDC4Q6P2E9 1401 aaKnown RBP18.74■□□□□ 0.59
SRGAP3-212ENST00000520860 C5P01031 1676 aa18.74■□□□□ 0.59
SRGAP3-212ENST00000520860 CD163L1Q9NR16 1453 aa18.73■□□□□ 0.59
SRGAP3-212ENST00000520860 TOMM70O94826 608 aa18.73■□□□□ 0.59
SRGAP3-212ENST00000520860 DNAJC5GQ8N7S2 189 aa18.73■□□□□ 0.59
SRGAP3-212ENST00000520860 L3MBTL2Q969R5 705 aa18.73■□□□□ 0.59
SRGAP3-212ENST00000520860 AK7Q96M32 723 aa18.72■□□□□ 0.59
SRGAP3-212ENST00000520860 MEGF6O75095 1541 aa18.72■□□□□ 0.59
SRGAP3-212ENST00000520860 PALLDQ8WX93 1383 aa18.71■□□□□ 0.59
SRGAP3-212ENST00000520860 TERF2IPQ9NYB0 399 aa18.71■□□□□ 0.59
SRGAP3-212ENST00000520860 HOXC9P31274 260 aa18.7■□□□□ 0.58
SRGAP3-212ENST00000520860 AMPHP49418 695 aa18.7■□□□□ 0.58
SRGAP3-212ENST00000520860 NSD3Q9BZ95 1437 aa18.69■□□□□ 0.58
SRGAP3-212ENST00000520860 PHF14O94880 888 aa18.69■□□□□ 0.58
SRGAP3-212ENST00000520860 SLC12A5Q9H2X9 1139 aa18.69■□□□□ 0.58
SRGAP3-212ENST00000520860 CGNL1Q0VF96 1302 aa18.69■□□□□ 0.58
SRGAP3-212ENST00000520860 MAP3K19Q56UN5 1328 aa18.69■□□□□ 0.58
SRGAP3-212ENST00000520860 CAPN15O75808 1086 aa18.68■□□□□ 0.58
SRGAP3-212ENST00000520860 RAPGEF4Q8WZA2 1011 aa18.68■□□□□ 0.58
SRGAP3-212ENST00000520860 TAF1LQ8IZX4 1826 aa18.67■□□□□ 0.58
SRGAP3-212ENST00000520860 A0A1W2PP64 1363 aa18.67■□□□□ 0.58
SRGAP3-212ENST00000520860 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
SRGAP3-212ENST00000520860 C4BP0C0L5 1744 aa18.66■□□□□ 0.58
SRGAP3-212ENST00000520860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.66■□□□□ 0.58
SRGAP3-212ENST00000520860 COL13A1Q5TAT6 717 aaPredicted RBP18.66■□□□□ 0.58
SRGAP3-212ENST00000520860 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
SRGAP3-212ENST00000520860 SMARCC1Q92922 1105 aaPredicted RBP18.66■□□□□ 0.58
SRGAP3-212ENST00000520860 COG3Q96JB2 828 aa18.66■□□□□ 0.58
SRGAP3-212ENST00000520860 RGPD2P0DJD1 1756 aa18.65■□□□□ 0.58
SRGAP3-212ENST00000520860 TATP17735 454 aaPredicted RBP18.64■□□□□ 0.57
SRGAP3-212ENST00000520860 C16orf71Q8IYS4 520 aaPredicted RBP18.64■□□□□ 0.57
SRGAP3-212ENST00000520860 KLRG1Q96E93 195 aa18.64■□□□□ 0.57
SRGAP3-212ENST00000520860 NMRK2Q9NPI5 230 aa18.64■□□□□ 0.57
SRGAP3-212ENST00000520860 PCDH11XQ9BZA7 1347 aa18.64■□□□□ 0.57
SRGAP3-212ENST00000520860 PCDH11YQ9BZA8 1340 aa18.64■□□□□ 0.57
SRGAP3-212ENST00000520860 WDR90Q96KV7 1748 aa18.63■□□□□ 0.57
SRGAP3-212ENST00000520860 SSFA2P28290 1259 aa18.63■□□□□ 0.57
SRGAP3-212ENST00000520860 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
SRGAP3-212ENST00000520860 AMIGO3Q86WK7 504 aa18.63■□□□□ 0.57
SRGAP3-212ENST00000520860 TNS4Q8IZW8 715 aa18.63■□□□□ 0.57
SRGAP3-212ENST00000520860 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
SRGAP3-212ENST00000520860 RBM46Q8TBY0 533 aaKnown RBP18.63■□□□□ 0.57
SRGAP3-212ENST00000520860 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
SRGAP3-212ENST00000520860 SMIM5Q71RC9 77 aa18.62■□□□□ 0.57
SRGAP3-212ENST00000520860 JMYQ8N9B5 988 aa18.62■□□□□ 0.57
SRGAP3-212ENST00000520860 BCS1LQ9Y276 419 aa18.62■□□□□ 0.57
SRGAP3-212ENST00000520860 RTL1A6NKG5 1358 aa18.62■□□□□ 0.57
SRGAP3-212ENST00000520860 SMG6Q86US8 1419 aaKnown RBP18.62■□□□□ 0.57
SRGAP3-212ENST00000520860 TOGARAM1Q9Y4F4 1720 aa18.62■□□□□ 0.57
SRGAP3-212ENST00000520860 UBR3Q6ZT12 1888 aa18.62■□□□□ 0.57
SRGAP3-212ENST00000520860 FBLN1P23142 703 aa18.6■□□□□ 0.57
SRGAP3-212ENST00000520860 ARHGAP27Q6ZUM4 889 aa18.6■□□□□ 0.57
SRGAP3-212ENST00000520860 PXDNLA1KZ92 1463 aa18.59■□□□□ 0.57
SRGAP3-212ENST00000520860 PRELPP51888 382 aa18.59■□□□□ 0.57
SRGAP3-212ENST00000520860 HTRA3P83110 453 aa18.59■□□□□ 0.57
SRGAP3-212ENST00000520860 MMP10P09238 476 aa18.58■□□□□ 0.56
SRGAP3-212ENST00000520860 TGFB2P61812 414 aa18.58■□□□□ 0.56
SRGAP3-212ENST00000520860 FSTL1Q12841 308 aa18.58■□□□□ 0.56
SRGAP3-212ENST00000520860 GNPATO15228 680 aa18.57■□□□□ 0.56
SRGAP3-212ENST00000520860 PUS7Q96PZ0 661 aaKnown RBP18.57■□□□□ 0.56
SRGAP3-212ENST00000520860 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
SRGAP3-212ENST00000520860 LOC102724428A0A0B4J2F2 783 aa18.56■□□□□ 0.56
SRGAP3-212ENST00000520860 CYP27B1O15528 508 aa18.56■□□□□ 0.56
SRGAP3-212ENST00000520860 SIK1P57059 783 aa18.56■□□□□ 0.56
SRGAP3-212ENST00000520860 RRS1Q15050 365 aaKnown RBP18.56■□□□□ 0.56
SRGAP3-212ENST00000520860 LINC00116Q8NCU8 138 aa18.56■□□□□ 0.56
SRGAP3-212ENST00000520860 PIGBQ92521 554 aa18.56■□□□□ 0.56
SRGAP3-212ENST00000520860 PLEKHG2Q9H7P9 1386 aa18.55■□□□□ 0.56
SRGAP3-212ENST00000520860 A0A0G2JLW4 131 aa18.55■□□□□ 0.56
SRGAP3-212ENST00000520860 FCHSD2O94868 740 aa18.55■□□□□ 0.56
SRGAP3-212ENST00000520860 ITGB4P16144 1822 aa18.54■□□□□ 0.56
SRGAP3-212ENST00000520860 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
SRGAP3-212ENST00000520860 C9orf131Q5VYM1 1079 aa18.54■□□□□ 0.56
SRGAP3-212ENST00000520860 SIN3AQ96ST3 1273 aa18.54■□□□□ 0.56
SRGAP3-212ENST00000520860 KIF13BQ9NQT8 1826 aa18.53■□□□□ 0.56
SRGAP3-212ENST00000520860 N4BP2Q86UW6 1770 aaPredicted RBP18.53■□□□□ 0.56
SRGAP3-212ENST00000520860 KDM2BQ8NHM5 1336 aa18.52■□□□□ 0.56
SRGAP3-212ENST00000520860 C10orf71Q711Q0 1435 aa18.51■□□□□ 0.55
SRGAP3-212ENST00000520860 DPEP1P16444 411 aa18.51■□□□□ 0.55
SRGAP3-212ENST00000520860 NLGN1Q8N2Q7 840 aa18.51■□□□□ 0.55
SRGAP3-212ENST00000520860 CCDC87Q9NVE4 849 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms