RNA–Protein interactions for RNA: ENST00000520709.5

TMEM55A-205, humanhuman

TSL 3

Gene TMEM55A, Length 649 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-205ENST00000520709 UTRNP46939 3433 aa19.04■□□□□ 0.64
TMEM55A-205ENST00000520709 FBLN1P23142 703 aa19.04■□□□□ 0.64
TMEM55A-205ENST00000520709 LTV1Q96GA3 475 aaPredicted RBP19.04■□□□□ 0.64
TMEM55A-205ENST00000520709 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.64
TMEM55A-205ENST00000520709 AKT1S1Q96B36 256 aa19.02■□□□□ 0.64
TMEM55A-205ENST00000520709 FYB1O15117 783 aa19.01■□□□□ 0.63
TMEM55A-205ENST00000520709 AMPHP49418 695 aa19.01■□□□□ 0.63
TMEM55A-205ENST00000520709 SLC27A3Q5K4L6 730 aa19.01■□□□□ 0.63
TMEM55A-205ENST00000520709 FHDC1Q9C0D6 1143 aaPredicted RBP19.01■□□□□ 0.63
TMEM55A-205ENST00000520709 TMF1P82094 1093 aa19■□□□□ 0.63
TMEM55A-205ENST00000520709 DDX54Q8TDD1 881 aaKnown RBP19■□□□□ 0.63
TMEM55A-205ENST00000520709 SYT17Q9BSW7 474 aa19■□□□□ 0.63
TMEM55A-205ENST00000520709 NCAPD2Q15021 1401 aa19■□□□□ 0.63
TMEM55A-205ENST00000520709 KIF24Q5T7B8 1368 aa18.99■□□□□ 0.63
TMEM55A-205ENST00000520709 RRS1Q15050 365 aaKnown RBP18.99■□□□□ 0.63
TMEM55A-205ENST00000520709 INSRP06213 1382 aa18.98■□□□□ 0.63
TMEM55A-205ENST00000520709 DCAF8L1A6NGE4 600 aa18.98■□□□□ 0.63
TMEM55A-205ENST00000520709 GGNBP2Q9H3C7 697 aa18.98■□□□□ 0.63
TMEM55A-205ENST00000520709 SMG6Q86US8 1419 aaKnown RBP18.98■□□□□ 0.63
TMEM55A-205ENST00000520709 PNPLA7Q6ZV29 1317 aa18.98■□□□□ 0.63
TMEM55A-205ENST00000520709 NBPF6Q5VWK0 638 aa18.97■□□□□ 0.63
TMEM55A-205ENST00000520709 ZCRB1Q8TBF4 217 aaKnown RBP18.97■□□□□ 0.63
TMEM55A-205ENST00000520709 NBPF4Q96M43 638 aa18.97■□□□□ 0.63
TMEM55A-205ENST00000520709 FLT4P35916 1363 aa18.96■□□□□ 0.63
TMEM55A-205ENST00000520709 PRIM1P49642 420 aaKnown RBP18.96■□□□□ 0.63
TMEM55A-205ENST00000520709 ARXQ96QS3 562 aa18.96■□□□□ 0.63
TMEM55A-205ENST00000520709 CGNL1Q0VF96 1302 aa18.96■□□□□ 0.63
TMEM55A-205ENST00000520709 UBR3Q6ZT12 1888 aa18.95■□□□□ 0.62
TMEM55A-205ENST00000520709 SLC16A10Q8TF71 515 aa18.95■□□□□ 0.62
TMEM55A-205ENST00000520709 NSD3Q9BZ95 1437 aa18.94■□□□□ 0.62
TMEM55A-205ENST00000520709 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
TMEM55A-205ENST00000520709 USHBP1Q8N6Y0 703 aa18.93■□□□□ 0.62
TMEM55A-205ENST00000520709 C4BP0C0L5 1744 aa18.92■□□□□ 0.62
TMEM55A-205ENST00000520709 KCNQ4P56696 695 aa18.92■□□□□ 0.62
TMEM55A-205ENST00000520709 CDCA8Q53HL2 280 aa18.92■□□□□ 0.62
TMEM55A-205ENST00000520709 SYTL4Q96C24 671 aaPredicted RBP18.92■□□□□ 0.62
TMEM55A-205ENST00000520709 CARD14Q9BXL6 1004 aa18.92■□□□□ 0.62
TMEM55A-205ENST00000520709 HSP90AB2PQ58FF8 381 aa18.91■□□□□ 0.62
TMEM55A-205ENST00000520709 GOLGB1Q14789 3259 aaKnown RBP18.9■□□□□ 0.62
TMEM55A-205ENST00000520709 RAPGEF4Q8WZA2 1011 aa18.89■□□□□ 0.61
TMEM55A-205ENST00000520709 PCDH11XQ9BZA7 1347 aa18.89■□□□□ 0.61
TMEM55A-205ENST00000520709 PCDH11YQ9BZA8 1340 aa18.89■□□□□ 0.61
TMEM55A-205ENST00000520709 TATP17735 454 aaPredicted RBP18.88■□□□□ 0.61
TMEM55A-205ENST00000520709 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
TMEM55A-205ENST00000520709 ZNF784Q8NCA9 323 aaPredicted RBP18.87■□□□□ 0.61
TMEM55A-205ENST00000520709 TFCP2L1Q9NZI6 479 aa18.87■□□□□ 0.61
TMEM55A-205ENST00000520709 EMILIN1Q9Y6C2 1016 aa18.87■□□□□ 0.61
TMEM55A-205ENST00000520709 CYP27B1O15528 508 aa18.86■□□□□ 0.61
TMEM55A-205ENST00000520709 PALLDQ8WX93 1383 aa18.85■□□□□ 0.61
TMEM55A-205ENST00000520709 TIMELESSQ9UNS1 1208 aa18.85■□□□□ 0.61
TMEM55A-205ENST00000520709 POLD1P28340 1107 aa18.84■□□□□ 0.61
TMEM55A-205ENST00000520709 ZNF831Q5JPB2 1677 aa18.84■□□□□ 0.61
TMEM55A-205ENST00000520709 CLSPNQ9HAW4 1339 aa18.83■□□□□ 0.61
TMEM55A-205ENST00000520709 COL23A1Q86Y22 540 aaPredicted RBP18.83■□□□□ 0.6
TMEM55A-205ENST00000520709 WASHC2AQ641Q2 1341 aa18.81■□□□□ 0.6
TMEM55A-205ENST00000520709 COL5A3P25940 1745 aaPredicted RBP18.81■□□□□ 0.6
TMEM55A-205ENST00000520709 NLGN2Q8NFZ4 835 aa18.81■□□□□ 0.6
TMEM55A-205ENST00000520709 PLEKHG2Q9H7P9 1386 aa18.81■□□□□ 0.6
TMEM55A-205ENST00000520709 NKX1-1Q15270 411 aaPredicted RBP18.8■□□□□ 0.6
TMEM55A-205ENST00000520709 KIF13BQ9NQT8 1826 aa18.79■□□□□ 0.6
TMEM55A-205ENST00000520709 KIAA1551Q9HCM1 1747 aa18.77■□□□□ 0.6
TMEM55A-205ENST00000520709 VIRMAQ69YN4 1812 aaKnown RBP18.77■□□□□ 0.6
TMEM55A-205ENST00000520709 MPRIPQ6WCQ1 1025 aa18.77■□□□□ 0.6
TMEM55A-205ENST00000520709 KLHL34Q8N239 644 aa18.77■□□□□ 0.6
TMEM55A-205ENST00000520709 EYA1Q99502 592 aa18.77■□□□□ 0.6
TMEM55A-205ENST00000520709 POLKQ9UBT6 870 aa18.77■□□□□ 0.6
TMEM55A-205ENST00000520709 GPR162Q16538 588 aa18.76■□□□□ 0.59
TMEM55A-205ENST00000520709 AMIGO3Q86WK7 504 aa18.76■□□□□ 0.59
TMEM55A-205ENST00000520709 PIGBQ92521 554 aa18.76■□□□□ 0.59
TMEM55A-205ENST00000520709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.76■□□□□ 0.59
TMEM55A-205ENST00000520709 MSL1Q68DK7 614 aa18.75■□□□□ 0.59
TMEM55A-205ENST00000520709 SMARCC1Q92922 1105 aaPredicted RBP18.75■□□□□ 0.59
TMEM55A-205ENST00000520709 CICQ96RK0 1608 aaPredicted RBP18.74■□□□□ 0.59
TMEM55A-205ENST00000520709 C4AP0C0L4 1744 aa18.74■□□□□ 0.59
TMEM55A-205ENST00000520709 HMGB2P26583 209 aaKnown RBP18.74■□□□□ 0.59
TMEM55A-205ENST00000520709 FLAD1Q8NFF5 587 aa18.74■□□□□ 0.59
TMEM55A-205ENST00000520709 SPG7Q9UQ90 795 aa18.74■□□□□ 0.59
TMEM55A-205ENST00000520709 KDRP35968 1356 aa18.73■□□□□ 0.59
TMEM55A-205ENST00000520709 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
TMEM55A-205ENST00000520709 MSH5O43196 834 aa18.73■□□□□ 0.59
TMEM55A-205ENST00000520709 YBX3P16989 372 aaKnown RBP eCLIP18.73■□□□□ 0.59
TMEM55A-205ENST00000520709 MYH14Q7Z406 1995 aaKnown RBP18.72■□□□□ 0.59
TMEM55A-205ENST00000520709 PHKG2P15735 406 aa18.72■□□□□ 0.59
TMEM55A-205ENST00000520709 EIF4A2Q14240 407 aaKnown RBP18.72■□□□□ 0.59
TMEM55A-205ENST00000520709 SCN11AQ9UI33 1791 aa18.72■□□□□ 0.59
TMEM55A-205ENST00000520709 IGSF1Q8N6C5 1336 aa18.72■□□□□ 0.59
TMEM55A-205ENST00000520709 BRCA1P38398 1863 aaKnown RBP18.71■□□□□ 0.59
TMEM55A-205ENST00000520709 LOC102724428A0A0B4J2F2 783 aa18.7■□□□□ 0.58
TMEM55A-205ENST00000520709 SIK1P57059 783 aa18.7■□□□□ 0.58
TMEM55A-205ENST00000520709 LINC00116Q8NCU8 138 aa18.7■□□□□ 0.58
TMEM55A-205ENST00000520709 AK7Q96M32 723 aa18.7■□□□□ 0.58
TMEM55A-205ENST00000520709 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
TMEM55A-205ENST00000520709 CD2APQ9Y5K6 639 aa18.69■□□□□ 0.58
TMEM55A-205ENST00000520709 TJP1Q07157 1748 aa18.69■□□□□ 0.58
TMEM55A-205ENST00000520709 KDM6AO15550 1401 aaPredicted RBP18.68■□□□□ 0.58
TMEM55A-205ENST00000520709 SSFA2P28290 1259 aa18.68■□□□□ 0.58
TMEM55A-205ENST00000520709 ITPK1Q13572 414 aa18.68■□□□□ 0.58
TMEM55A-205ENST00000520709 IFNL2Q8IZJ0 200 aa18.68■□□□□ 0.58
TMEM55A-205ENST00000520709 TMOD3Q9NYL9 352 aa18.68■□□□□ 0.58
TMEM55A-205ENST00000520709 N4BP2Q86UW6 1770 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms