RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 CCDC88AQ3V6T2 1871 aa11.69□□□□□ -0.54
CSMD1-209ENST00000520630 CENPJQ9HC77 1338 aaPredicted RBP11.68□□□□□ -0.54
CSMD1-209ENST00000520630 COL23A1Q86Y22 540 aaPredicted RBP11.68□□□□□ -0.54
CSMD1-209ENST00000520630 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
CSMD1-209ENST00000520630 ARFGEF1Q9Y6D6 1849 aa11.67□□□□□ -0.54
CSMD1-209ENST00000520630 C4BP0C0L5 1744 aa11.67□□□□□ -0.54
CSMD1-209ENST00000520630 PKD1L3Q7Z443 1732 aa11.67□□□□□ -0.54
CSMD1-209ENST00000520630 SLC27A3Q5K4L6 730 aa11.67□□□□□ -0.54
CSMD1-209ENST00000520630 KCNH5Q8NCM2 988 aa11.67□□□□□ -0.54
CSMD1-209ENST00000520630 CD163L1Q9NR16 1453 aa11.66□□□□□ -0.54
CSMD1-209ENST00000520630 IL2RBP14784 551 aa11.66□□□□□ -0.54
CSMD1-209ENST00000520630 TFCP2L1Q9NZI6 479 aa11.66□□□□□ -0.54
CSMD1-209ENST00000520630 MSL1Q68DK7 614 aa11.65□□□□□ -0.54
CSMD1-209ENST00000520630 COL13A1Q5TAT6 717 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-209ENST00000520630 USP31Q70CQ4 1352 aa11.64□□□□□ -0.55
CSMD1-209ENST00000520630 TTC21AQ8NDW8 1320 aa11.63□□□□□ -0.55
CSMD1-209ENST00000520630 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
CSMD1-209ENST00000520630 AMIGO3Q86WK7 504 aa11.63□□□□□ -0.55
CSMD1-209ENST00000520630 NLRP2Q9NX02 1062 aa11.63□□□□□ -0.55
CSMD1-209ENST00000520630 ANKRD36BQ8N2N9 1353 aa11.63□□□□□ -0.55
CSMD1-209ENST00000520630 ANKRD24Q8TF21 1146 aa11.62□□□□□ -0.55
CSMD1-209ENST00000520630 CD2APQ9Y5K6 639 aa11.62□□□□□ -0.55
CSMD1-209ENST00000520630 DDX54Q8TDD1 881 aaKnown RBP11.61□□□□□ -0.55
CSMD1-209ENST00000520630 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
CSMD1-209ENST00000520630 PCGF6Q9BYE7 350 aa11.61□□□□□ -0.55
CSMD1-209ENST00000520630 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
CSMD1-209ENST00000520630 MEGF6O75095 1541 aa11.6□□□□□ -0.55
CSMD1-209ENST00000520630 KTN1Q86UP2 1357 aaKnown RBP11.6□□□□□ -0.55
CSMD1-209ENST00000520630 SBNO2Q9Y2G9 1366 aa11.6□□□□□ -0.55
CSMD1-209ENST00000520630 SMIM5Q71RC9 77 aa11.6□□□□□ -0.55
CSMD1-209ENST00000520630 MYH14Q7Z406 1995 aaKnown RBP11.59□□□□□ -0.55
CSMD1-209ENST00000520630 APLP1P51693 650 aa11.59□□□□□ -0.55
CSMD1-209ENST00000520630 HTRA3P83110 453 aa11.59□□□□□ -0.55
CSMD1-209ENST00000520630 NME9Q86XW9 330 aa11.59□□□□□ -0.55
CSMD1-209ENST00000520630 CCNL1Q9UK58 526 aaPredicted RBP11.59□□□□□ -0.55
CSMD1-209ENST00000520630 IGSF1Q8N6C5 1336 aa11.59□□□□□ -0.55
CSMD1-209ENST00000520630 EVC2Q86UK5 1308 aa11.58□□□□□ -0.56
CSMD1-209ENST00000520630 TNRC6CQ9HCJ0 1690 aaKnown RBP11.57□□□□□ -0.56
CSMD1-209ENST00000520630 MSH5O43196 834 aa11.57□□□□□ -0.56
CSMD1-209ENST00000520630 JMYQ8N9B5 988 aa11.57□□□□□ -0.56
CSMD1-209ENST00000520630 SYTL4Q96C24 671 aaPredicted RBP11.57□□□□□ -0.56
CSMD1-209ENST00000520630 C4AP0C0L4 1744 aa11.57□□□□□ -0.56
CSMD1-209ENST00000520630 CAPN15O75808 1086 aa11.56□□□□□ -0.56
CSMD1-209ENST00000520630 COL5A3P25940 1745 aaPredicted RBP11.56□□□□□ -0.56
CSMD1-209ENST00000520630 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.56□□□□□ -0.56
CSMD1-209ENST00000520630 TOMM70O94826 608 aa11.55□□□□□ -0.56
CSMD1-209ENST00000520630 NMRK2Q9NPI5 230 aa11.55□□□□□ -0.56
CSMD1-209ENST00000520630 FBLN1P23142 703 aa11.54□□□□□ -0.56
CSMD1-209ENST00000520630 IP6K1Q92551 441 aa11.54□□□□□ -0.56
CSMD1-209ENST00000520630 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
CSMD1-209ENST00000520630 PRELPP51888 382 aa11.53□□□□□ -0.56
CSMD1-209ENST00000520630 KLRG1Q96E93 195 aa11.53□□□□□ -0.56
CSMD1-209ENST00000520630 USP47Q96K76 1375 aa11.53□□□□□ -0.56
CSMD1-209ENST00000520630 DICER1Q9UPY3 1922 aaKnown RBP11.52□□□□□ -0.56
CSMD1-209ENST00000520630 AFDNP55196 1824 aaKnown RBP11.52□□□□□ -0.57
CSMD1-209ENST00000520630 ZCRB1Q8TBF4 217 aaKnown RBP11.52□□□□□ -0.57
CSMD1-209ENST00000520630 LTV1Q96GA3 475 aaPredicted RBP11.52□□□□□ -0.57
CSMD1-209ENST00000520630 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
CSMD1-209ENST00000520630 ZNF831Q5JPB2 1677 aa11.51□□□□□ -0.57
CSMD1-209ENST00000520630 KIF20BQ96Q89 1820 aa11.51□□□□□ -0.57
CSMD1-209ENST00000520630 DLEC1Q9Y238 1755 aa11.5□□□□□ -0.57
CSMD1-209ENST00000520630 EDC4Q6P2E9 1401 aaKnown RBP11.5□□□□□ -0.57
CSMD1-209ENST00000520630 TIAM2Q8IVF5 1701 aa11.49□□□□□ -0.57
CSMD1-209ENST00000520630 HOXC9P31274 260 aa11.49□□□□□ -0.57
CSMD1-209ENST00000520630 PALLDQ8WX93 1383 aa11.49□□□□□ -0.57
CSMD1-209ENST00000520630 KCPQ6ZWJ8 1503 aa11.49□□□□□ -0.57
CSMD1-209ENST00000520630 NBPF6Q5VWK0 638 aa11.48□□□□□ -0.57
CSMD1-209ENST00000520630 TNS4Q8IZW8 715 aa11.48□□□□□ -0.57
CSMD1-209ENST00000520630 FLAD1Q8NFF5 587 aa11.48□□□□□ -0.57
CSMD1-209ENST00000520630 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
CSMD1-209ENST00000520630 NBPF4Q96M43 638 aa11.48□□□□□ -0.57
CSMD1-209ENST00000520630 SLC12A5Q9H2X9 1139 aa11.48□□□□□ -0.57
CSMD1-209ENST00000520630 MAP3K19Q56UN5 1328 aa11.48□□□□□ -0.57
CSMD1-209ENST00000520630 A0A1W2PP64 1363 aa11.48□□□□□ -0.57
CSMD1-209ENST00000520630 ADAMTS7Q9UKP4 1686 aa11.48□□□□□ -0.57
CSMD1-209ENST00000520630 ANKRD26Q9UPS8 1709 aa11.47□□□□□ -0.57
CSMD1-209ENST00000520630 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.47□□□□□ -0.57
CSMD1-209ENST00000520630 USHBP1Q8N6Y0 703 aa11.47□□□□□ -0.57
CSMD1-209ENST00000520630 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
CSMD1-209ENST00000520630 C10orf71Q711Q0 1435 aa11.46□□□□□ -0.57
CSMD1-209ENST00000520630 PHF14O94880 888 aa11.46□□□□□ -0.57
CSMD1-209ENST00000520630 LINC00116Q8NCU8 138 aa11.46□□□□□ -0.57
CSMD1-209ENST00000520630 NSD3Q9BZ95 1437 aa11.45□□□□□ -0.58
CSMD1-209ENST00000520630 CACNA1SQ13698 1873 aa11.45□□□□□ -0.58
CSMD1-209ENST00000520630 A0A0G2JLW4 131 aa11.45□□□□□ -0.58
CSMD1-209ENST00000520630 CYP27B1O15528 508 aa11.45□□□□□ -0.58
CSMD1-209ENST00000520630 KCNA3P22001 575 aa11.45□□□□□ -0.58
CSMD1-209ENST00000520630 SLC34A2O95436 690 aa11.44□□□□□ -0.58
CSMD1-209ENST00000520630 ITPK1Q13572 414 aa11.44□□□□□ -0.58
CSMD1-209ENST00000520630 MPRIPQ6WCQ1 1025 aa11.44□□□□□ -0.58
CSMD1-209ENST00000520630 SSFA2P28290 1259 aa11.43□□□□□ -0.58
CSMD1-209ENST00000520630 FSTL1Q12841 308 aa11.43□□□□□ -0.58
CSMD1-209ENST00000520630 PIGBQ92521 554 aa11.43□□□□□ -0.58
CSMD1-209ENST00000520630 AK7Q96M32 723 aa11.43□□□□□ -0.58
CSMD1-209ENST00000520630 BCS1LQ9Y276 419 aa11.43□□□□□ -0.58
CSMD1-209ENST00000520630 ROCK2O75116 1388 aaKnown RBP11.42□□□□□ -0.58
CSMD1-209ENST00000520630 FER1L6Q2WGJ9 1857 aa11.42□□□□□ -0.58
CSMD1-209ENST00000520630 MMP10P09238 476 aa11.42□□□□□ -0.58
CSMD1-209ENST00000520630 DPEP1P16444 411 aa11.42□□□□□ -0.58
CSMD1-209ENST00000520630 C9orf131Q5VYM1 1079 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms