RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 SHANK3Q9BYB0 1731 aa24.89■■□□□ 1.58
SREK1-207ENST00000520058 MTHFSP49914 203 aa24.89■■□□□ 1.58
SREK1-207ENST00000520058 EN1Q05925 392 aaPredicted RBP24.89■■□□□ 1.58
SREK1-207ENST00000520058 NHSQ6T4R5 1651 aa24.88■■□□□ 1.57
SREK1-207ENST00000520058 RGPD3A6NKT7 1758 aaPredicted RBP24.88■■□□□ 1.57
SREK1-207ENST00000520058 RGPD4Q7Z3J3 1758 aa24.88■■□□□ 1.57
SREK1-207ENST00000520058 PCDH11XQ9BZA7 1347 aa24.87■■□□□ 1.57
SREK1-207ENST00000520058 PCDH11YQ9BZA8 1340 aa24.87■■□□□ 1.57
SREK1-207ENST00000520058 SPG7Q9UQ90 795 aa24.87■■□□□ 1.57
SREK1-207ENST00000520058 NCAPD2Q15021 1401 aa24.86■■□□□ 1.57
SREK1-207ENST00000520058 PKD1L3Q7Z443 1732 aa24.86■■□□□ 1.57
SREK1-207ENST00000520058 PLEKHG2Q9H7P9 1386 aa24.84■■□□□ 1.57
SREK1-207ENST00000520058 IGSF1Q8N6C5 1336 aa24.84■■□□□ 1.57
SREK1-207ENST00000520058 PLSCR1O15162 318 aa24.83■■□□□ 1.57
SREK1-207ENST00000520058 CFAP53Q96M91 514 aa24.83■■□□□ 1.57
SREK1-207ENST00000520058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.83■■□□□ 1.57
SREK1-207ENST00000520058 DOT1LQ8TEK3 1739 aa24.83■■□□□ 1.57
SREK1-207ENST00000520058 EZH2Q15910 746 aaKnown RBP24.82■■□□□ 1.56
SREK1-207ENST00000520058 ACSBG1Q96GR2 724 aa24.82■■□□□ 1.56
SREK1-207ENST00000520058 BTAF1O14981 1849 aa24.82■■□□□ 1.56
SREK1-207ENST00000520058 DIAPH1O60610 1272 aaKnown RBP24.81■■□□□ 1.56
SREK1-207ENST00000520058 CAMKK2Q96RR4 588 aa24.81■■□□□ 1.56
SREK1-207ENST00000520058 RREB1Q92766 1687 aa24.81■■□□□ 1.56
SREK1-207ENST00000520058 IL13P35225 146 aa24.79■■□□□ 1.56
SREK1-207ENST00000520058 DDX10Q13206 875 aaKnown RBP24.78■■□□□ 1.56
SREK1-207ENST00000520058 SYTL4Q96C24 671 aaPredicted RBP24.78■■□□□ 1.56
SREK1-207ENST00000520058 PLEKHO1Q53GL0 409 aaPredicted RBP24.77■■□□□ 1.56
SREK1-207ENST00000520058 NBPF14Q5TI25 921 aa24.77■■□□□ 1.56
SREK1-207ENST00000520058 NUP188Q5SRE5 1749 aa24.76■■□□□ 1.55
SREK1-207ENST00000520058 KCNQ2O43526 872 aa24.76■■□□□ 1.55
SREK1-207ENST00000520058 AMOTQ4VCS5 1084 aa24.76■■□□□ 1.55
SREK1-207ENST00000520058 SULT6B1Q6IMI4 303 aa24.76■■□□□ 1.55
SREK1-207ENST00000520058 IFNL2Q8IZJ0 200 aa24.75■■□□□ 1.55
SREK1-207ENST00000520058 ITGB4P16144 1822 aa24.75■■□□□ 1.55
SREK1-207ENST00000520058 PPP2R1AP30153 589 aa24.73■■□□□ 1.55
SREK1-207ENST00000520058 PRIM1P49642 420 aaKnown RBP24.73■■□□□ 1.55
SREK1-207ENST00000520058 NUDCQ9Y266 331 aa24.73■■□□□ 1.55
SREK1-207ENST00000520058 KDRP35968 1356 aa24.72■■□□□ 1.55
SREK1-207ENST00000520058 CYP27B1O15528 508 aa24.72■■□□□ 1.55
SREK1-207ENST00000520058 HSP90AB1P08238 724 aaKnown RBP24.72■■□□□ 1.55
SREK1-207ENST00000520058 PTF1AQ7RTS3 328 aa24.72■■□□□ 1.55
SREK1-207ENST00000520058 U2SURPO15042 1029 aaKnown RBP24.7■■□□□ 1.54
SREK1-207ENST00000520058 HMGB2P26583 209 aaKnown RBP24.7■■□□□ 1.54
SREK1-207ENST00000520058 RALBP1Q15311 655 aa24.7■■□□□ 1.54
SREK1-207ENST00000520058 C1orf141Q5JVX7 400 aa24.7■■□□□ 1.54
SREK1-207ENST00000520058 NKX1-1Q15270 411 aaPredicted RBP24.69■■□□□ 1.54
SREK1-207ENST00000520058 TXNRD1Q16881 649 aa24.69■■□□□ 1.54
SREK1-207ENST00000520058 AEBP1Q8IUX7 1158 aa24.69■■□□□ 1.54
SREK1-207ENST00000520058 PHKG2P15735 406 aa24.68■■□□□ 1.54
SREK1-207ENST00000520058 COL3A1P02461 1466 aaPredicted RBP24.67■■□□□ 1.54
SREK1-207ENST00000520058 HMOX1P09601 288 aa24.67■■□□□ 1.54
SREK1-207ENST00000520058 ZNF530Q6P9A1 599 aaPredicted RBP24.67■■□□□ 1.54
SREK1-207ENST00000520058 VIRMAQ69YN4 1812 aaKnown RBP24.66■■□□□ 1.54
SREK1-207ENST00000520058 LY75O60449 1722 aa24.66■■□□□ 1.54
SREK1-207ENST00000520058 TOGARAM1Q9Y4F4 1720 aa24.66■■□□□ 1.54
SREK1-207ENST00000520058 MPRIPQ6WCQ1 1025 aa24.65■■□□□ 1.54
SREK1-207ENST00000520058 DCAF5Q96JK2 942 aa24.64■■□□□ 1.54
SREK1-207ENST00000520058 R3HDM1Q15032 1099 aaKnown RBP24.63■■□□□ 1.53
SREK1-207ENST00000520058 SLC27A3Q5K4L6 730 aa24.63■■□□□ 1.53
SREK1-207ENST00000520058 TMOD3Q9NYL9 352 aa24.63■■□□□ 1.53
SREK1-207ENST00000520058 PSDA5PKW4 1024 aaPredicted RBP24.62■■□□□ 1.53
SREK1-207ENST00000520058 ZNF316A6NFI3 1004 aaPredicted RBP24.62■■□□□ 1.53
SREK1-207ENST00000520058 SMARCC1Q92922 1105 aaPredicted RBP24.62■■□□□ 1.53
SREK1-207ENST00000520058 STK32BQ9NY57 414 aa24.61■■□□□ 1.53
SREK1-207ENST00000520058 SCN11AQ9UI33 1791 aa24.61■■□□□ 1.53
SREK1-207ENST00000520058 ERVV-2B6SEH9 535 aa24.6■■□□□ 1.53
SREK1-207ENST00000520058 PROM2Q8N271 834 aa24.6■■□□□ 1.53
SREK1-207ENST00000520058 NEFMP07197 916 aa24.59■■□□□ 1.53
SREK1-207ENST00000520058 U2AF1L5P0DN76 240 aaPredicted RBP24.59■■□□□ 1.53
SREK1-207ENST00000520058 U2AF1Q01081 240 aaKnown RBP eCLIP24.59■■□□□ 1.534e-15■■■□□ 16.8
SREK1-207ENST00000520058 AKAP4Q5JQC9 854 aa24.59■■□□□ 1.53
SREK1-207ENST00000520058 CCNL1Q9UK58 526 aaPredicted RBP24.57■■□□□ 1.52
SREK1-207ENST00000520058 CABP4P57796 275 aa24.56■■□□□ 1.52
SREK1-207ENST00000520058 GAS2L2Q8NHY3 880 aa24.56■■□□□ 1.52
SREK1-207ENST00000520058 MYBBP1AQ9BQG0 1328 aaKnown RBP24.56■■□□□ 1.52
SREK1-207ENST00000520058 FCHSD2O94868 740 aa24.55■■□□□ 1.52
SREK1-207ENST00000520058 PIGBQ92521 554 aa24.55■■□□□ 1.52
SREK1-207ENST00000520058 PNNQ9H307 717 aaKnown RBP24.55■■□□□ 1.52
SREK1-207ENST00000520058 PALLDQ8WX93 1383 aa24.54■■□□□ 1.52
SREK1-207ENST00000520058 SLC15A2Q16348 729 aa24.53■■□□□ 1.52
SREK1-207ENST00000520058 MTHFSDQ2M296 383 aaKnown RBP24.53■■□□□ 1.52
SREK1-207ENST00000520058 TAF1LQ8IZX4 1826 aa24.53■■□□□ 1.52
SREK1-207ENST00000520058 C5P01031 1676 aa24.53■■□□□ 1.52
SREK1-207ENST00000520058 PRKAR2BP31323 418 aa24.52■■□□□ 1.52
SREK1-207ENST00000520058 PAPPAQ13219 1627 aa24.51■■□□□ 1.51
SREK1-207ENST00000520058 KDM6AO15550 1401 aaPredicted RBP24.51■■□□□ 1.51
SREK1-207ENST00000520058 QSER1Q2KHR3 1735 aa24.5■■□□□ 1.51
SREK1-207ENST00000520058 RSPH6AQ9H0K4 717 aa24.5■■□□□ 1.51
SREK1-207ENST00000520058 LRRC4BQ9NT99 713 aa24.5■■□□□ 1.51
SREK1-207ENST00000520058 ANO8Q9HCE9 1232 aaPredicted RBP24.49■■□□□ 1.51
SREK1-207ENST00000520058 LRP5O75197 1615 aa24.48■■□□□ 1.51
SREK1-207ENST00000520058 PRKRIP1Q9H875 184 aaPredicted RBP24.48■■□□□ 1.51
SREK1-207ENST00000520058 MAP3K5Q99683 1374 aa24.47■■□□□ 1.51
SREK1-207ENST00000520058 GNAT3A8MTJ3 354 aa24.47■■□□□ 1.51
SREK1-207ENST00000520058 NFATC2IPQ8NCF5 419 aa24.46■■□□□ 1.51
SREK1-207ENST00000520058 TFCP2L1Q9NZI6 479 aa24.46■■□□□ 1.51
SREK1-207ENST00000520058 ASAP1Q9ULH1 1129 aa24.46■■□□□ 1.51
SREK1-207ENST00000520058 LOC102724428A0A0B4J2F2 783 aa24.45■■□□□ 1.5
SREK1-207ENST00000520058 RNMTO43148 476 aaKnown RBP24.45■■□□□ 1.5
SREK1-207ENST00000520058 SIK1P57059 783 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms