RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 KIF24Q5T7B8 1368 aa20.61■□□□□ 0.89
FBXO28-204ENST00000519894 KCNQ2O43526 872 aa20.6■□□□□ 0.89
FBXO28-204ENST00000519894 R3HDM1Q15032 1099 aaKnown RBP20.6■□□□□ 0.89
FBXO28-204ENST00000519894 NUP188Q5SRE5 1749 aa20.6■□□□□ 0.89
FBXO28-204ENST00000519894 USHBP1Q8N6Y0 703 aa20.58■□□□□ 0.89
FBXO28-204ENST00000519894 ACSBG1Q96GR2 724 aa20.58■□□□□ 0.89
FBXO28-204ENST00000519894 SMG6Q86US8 1419 aaKnown RBP20.57■□□□□ 0.88
FBXO28-204ENST00000519894 DDX54Q8TDD1 881 aaKnown RBP20.57■□□□□ 0.88
FBXO28-204ENST00000519894 MAP2P11137 1827 aaKnown RBP20.57■□□□□ 0.88
FBXO28-204ENST00000519894 MEGF6O75095 1541 aa20.57■□□□□ 0.88
FBXO28-204ENST00000519894 RGPD3A6NKT7 1758 aaPredicted RBP20.57■□□□□ 0.88
FBXO28-204ENST00000519894 RGPD4Q7Z3J3 1758 aa20.57■□□□□ 0.88
FBXO28-204ENST00000519894 ANKRD26Q9UPS8 1709 aa20.56■□□□□ 0.88
FBXO28-204ENST00000519894 PROM2Q8N271 834 aa20.56■□□□□ 0.88
FBXO28-204ENST00000519894 POLKQ9UBT6 870 aa20.56■□□□□ 0.88
FBXO28-204ENST00000519894 KIF7Q2M1P5 1343 aa20.55■□□□□ 0.88
FBXO28-204ENST00000519894 NHSQ6T4R5 1651 aa20.55■□□□□ 0.88
FBXO28-204ENST00000519894 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
FBXO28-204ENST00000519894 NBPF14Q5TI25 921 aa20.55■□□□□ 0.88
FBXO28-204ENST00000519894 WASHC2AQ641Q2 1341 aa20.54■□□□□ 0.88
FBXO28-204ENST00000519894 ABCB7O75027 752 aa20.54■□□□□ 0.88
FBXO28-204ENST00000519894 ZCRB1Q8TBF4 217 aaKnown RBP20.54■□□□□ 0.88
FBXO28-204ENST00000519894 TNNT2P45379 298 aaPredicted RBP20.53■□□□□ 0.88
FBXO28-204ENST00000519894 SHANK3Q9BYB0 1731 aa20.53■□□□□ 0.88
FBXO28-204ENST00000519894 NSD2O96028 1365 aa20.51■□□□□ 0.87
FBXO28-204ENST00000519894 TXNRD1Q16881 649 aa20.51■□□□□ 0.87
FBXO28-204ENST00000519894 RAPGEF4Q8WZA2 1011 aa20.51■□□□□ 0.87
FBXO28-204ENST00000519894 TATP17735 454 aaPredicted RBP20.5■□□□□ 0.87
FBXO28-204ENST00000519894 KAT6BQ8WYB5 2073 aa20.5■□□□□ 0.87
FBXO28-204ENST00000519894 LRP5O75197 1615 aa20.49■□□□□ 0.87
FBXO28-204ENST00000519894 ANO8Q9HCE9 1232 aaPredicted RBP20.49■□□□□ 0.87
FBXO28-204ENST00000519894 KNSTRNQ9Y448 316 aa20.49■□□□□ 0.87
FBXO28-204ENST00000519894 BTAF1O14981 1849 aa20.48■□□□□ 0.87
FBXO28-204ENST00000519894 NCAPD2Q15021 1401 aa20.48■□□□□ 0.87
FBXO28-204ENST00000519894 EYA1Q99502 592 aa20.48■□□□□ 0.87
FBXO28-204ENST00000519894 SLC4A2P04920 1241 aa20.47■□□□□ 0.87
FBXO28-204ENST00000519894 MORC1Q86VD1 984 aa20.47■□□□□ 0.87
FBXO28-204ENST00000519894 PRIM1P49642 420 aaKnown RBP20.46■□□□□ 0.87
FBXO28-204ENST00000519894 EIF4A2Q14240 407 aaKnown RBP20.46■□□□□ 0.87
FBXO28-204ENST00000519894 AMER1Q5JTC6 1135 aaPredicted RBP20.46■□□□□ 0.87
FBXO28-204ENST00000519894 ZNF219Q9P2Y4 722 aaPredicted RBP20.46■□□□□ 0.87
FBXO28-204ENST00000519894 PER1O15534 1290 aaPredicted RBP20.45■□□□□ 0.86
FBXO28-204ENST00000519894 DOT1LQ8TEK3 1739 aa20.44■□□□□ 0.86
FBXO28-204ENST00000519894 SYTL4Q96C24 671 aaPredicted RBP20.43■□□□□ 0.86
FBXO28-204ENST00000519894 PCDH11XQ9BZA7 1347 aa20.43■□□□□ 0.86
FBXO28-204ENST00000519894 PCDH11YQ9BZA8 1340 aa20.43■□□□□ 0.86
FBXO28-204ENST00000519894 CYP27B1O15528 508 aa20.42■□□□□ 0.86
FBXO28-204ENST00000519894 SLC15A2Q16348 729 aa20.41■□□□□ 0.86
FBXO28-204ENST00000519894 PKD1L3Q7Z443 1732 aa20.4■□□□□ 0.86
FBXO28-204ENST00000519894 LRRC4BQ9NT99 713 aa20.4■□□□□ 0.86
FBXO28-204ENST00000519894 STK32BQ9NY57 414 aa20.4■□□□□ 0.86
FBXO28-204ENST00000519894 PDGFDQ9GZP0 370 aaPredicted RBP20.39■□□□□ 0.85
FBXO28-204ENST00000519894 IGSF1Q8N6C5 1336 aa20.38■□□□□ 0.85
FBXO28-204ENST00000519894 PAPPAQ13219 1627 aa20.38■□□□□ 0.85
FBXO28-204ENST00000519894 CASZ1Q86V15 1759 aa20.37■□□□□ 0.85
FBXO28-204ENST00000519894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.37■□□□□ 0.85
FBXO28-204ENST00000519894 SPG7Q9UQ90 795 aa20.37■□□□□ 0.85
FBXO28-204ENST00000519894 NKX1-1Q15270 411 aaPredicted RBP20.36■□□□□ 0.85
FBXO28-204ENST00000519894 SLC27A3Q5K4L6 730 aa20.36■□□□□ 0.85
FBXO28-204ENST00000519894 CC2D1BQ5T0F9 858 aaKnown RBP20.35■□□□□ 0.85
FBXO28-204ENST00000519894 SPON1Q9HCB6 807 aa20.35■□□□□ 0.85
FBXO28-204ENST00000519894 LY75O60449 1722 aa20.34■□□□□ 0.85
FBXO28-204ENST00000519894 KCNQ4P56696 695 aa20.34■□□□□ 0.85
FBXO28-204ENST00000519894 ZNF827Q17R98 1081 aa20.34■□□□□ 0.85
FBXO28-204ENST00000519894 TOGARAM1Q9Y4F4 1720 aa20.33■□□□□ 0.85
FBXO28-204ENST00000519894 SRCAPQ6ZRS2 3230 aa20.33■□□□□ 0.85
FBXO28-204ENST00000519894 PHKG2P15735 406 aa20.32■□□□□ 0.84
FBXO28-204ENST00000519894 IL13P35225 146 aa20.32■□□□□ 0.84
FBXO28-204ENST00000519894 MTHFSP49914 203 aa20.32■□□□□ 0.84
FBXO28-204ENST00000519894 MPRIPQ6WCQ1 1025 aa20.32■□□□□ 0.84
FBXO28-204ENST00000519894 IFNL2Q8IZJ0 200 aa20.32■□□□□ 0.84
FBXO28-204ENST00000519894 AKT1S1Q96B36 256 aa20.32■□□□□ 0.84
FBXO28-204ENST00000519894 NPC1L1Q9UHC9 1359 aa20.32■□□□□ 0.84
FBXO28-204ENST00000519894 ITGB4P16144 1822 aa20.32■□□□□ 0.84
FBXO28-204ENST00000519894 ZBTB7AO95365 584 aa20.31■□□□□ 0.84
FBXO28-204ENST00000519894 PLEKHG2Q9H7P9 1386 aa20.31■□□□□ 0.84
FBXO28-204ENST00000519894 AEBP1Q8IUX7 1158 aa20.3■□□□□ 0.84
FBXO28-204ENST00000519894 CCNL1Q9UK58 526 aaPredicted RBP20.3■□□□□ 0.84
FBXO28-204ENST00000519894 PIGBQ92521 554 aa20.29■□□□□ 0.84
FBXO28-204ENST00000519894 CNGB1Q14028 1251 aaPredicted RBP20.28■□□□□ 0.84
FBXO28-204ENST00000519894 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
FBXO28-204ENST00000519894 SULT6B1Q6IMI4 303 aa20.28■□□□□ 0.84
FBXO28-204ENST00000519894 ATF5Q9Y2D1 282 aaPredicted RBP20.28■□□□□ 0.84
FBXO28-204ENST00000519894 KDRP35968 1356 aa20.26■□□□□ 0.83
FBXO28-204ENST00000519894 PALLDQ8WX93 1383 aa20.26■□□□□ 0.83
FBXO28-204ENST00000519894 PTGER2P43116 358 aa20.26■□□□□ 0.83
FBXO28-204ENST00000519894 AMOTQ4VCS5 1084 aa20.25■□□□□ 0.83
FBXO28-204ENST00000519894 SMARCC1Q92922 1105 aaPredicted RBP20.25■□□□□ 0.83
FBXO28-204ENST00000519894 MTFR1LQ9H019 292 aa20.25■□□□□ 0.83
FBXO28-204ENST00000519894 PPP1R1BQ9UD71 204 aaPredicted RBP20.25■□□□□ 0.83
FBXO28-204ENST00000519894 TMOD3Q9NYL9 352 aa20.24■□□□□ 0.83
FBXO28-204ENST00000519894 QSER1Q2KHR3 1735 aa20.24■□□□□ 0.83
FBXO28-204ENST00000519894 PNPLA7Q6ZV29 1317 aa20.24■□□□□ 0.83
FBXO28-204ENST00000519894 ZNF530Q6P9A1 599 aaPredicted RBP20.23■□□□□ 0.83
FBXO28-204ENST00000519894 SGIP1Q9BQI5 828 aa20.23■□□□□ 0.83
FBXO28-204ENST00000519894 TFCP2L1Q9NZI6 479 aa20.23■□□□□ 0.83
FBXO28-204ENST00000519894 TUBGCP6Q96RT7 1819 aa20.23■□□□□ 0.83
FBXO28-204ENST00000519894 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
FBXO28-204ENST00000519894 HSP90AB1P08238 724 aaKnown RBP20.22■□□□□ 0.83
FBXO28-204ENST00000519894 DCAF5Q96JK2 942 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms