RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 ZNF771Q7L3S4 317 aaPredicted RBP10.4□□□□□ -0.74
TRPS1-209ENST00000519674 UBR1Q8IWV7 1749 aa10.4□□□□□ -0.74
TRPS1-209ENST00000519674 PNPLA6Q8IY17 1366 aa10.4□□□□□ -0.75
TRPS1-209ENST00000519674 TMEM2Q9UHN6 1383 aa10.4□□□□□ -0.75
TRPS1-209ENST00000519674 KLHL40Q2TBA0 621 aa10.4□□□□□ -0.75
TRPS1-209ENST00000519674 PLPPR3Q6T4P5 718 aa10.4□□□□□ -0.75
TRPS1-209ENST00000519674 CLUAP1Q96AJ1 413 aa10.4□□□□□ -0.75
TRPS1-209ENST00000519674 TRIM35Q9UPQ4 493 aa10.4□□□□□ -0.75
TRPS1-209ENST00000519674 MAP2P11137 1827 aaKnown RBP10.4□□□□□ -0.75
TRPS1-209ENST00000519674 IGSF3O75054 1194 aa10.39□□□□□ -0.75
TRPS1-209ENST00000519674 NME9Q86XW9 330 aa10.39□□□□□ -0.75
TRPS1-209ENST00000519674 NUDT16Q96DE0 195 aaKnown RBP10.39□□□□□ -0.75
TRPS1-209ENST00000519674 POLKQ9UBT6 870 aa10.39□□□□□ -0.75
TRPS1-209ENST00000519674 SPDYE4A6NLX3 237 aa10.39□□□□□ -0.75
TRPS1-209ENST00000519674 SOX12O15370 315 aa10.39□□□□□ -0.75
TRPS1-209ENST00000519674 RLBP1P12271 317 aa10.39□□□□□ -0.75
TRPS1-209ENST00000519674 CAPN2P17655 700 aa10.39□□□□□ -0.75
TRPS1-209ENST00000519674 CEBPAP49715 358 aaPredicted RBP10.39□□□□□ -0.75
TRPS1-209ENST00000519674 CERS3Q8IU89 383 aa10.39□□□□□ -0.75
TRPS1-209ENST00000519674 FEZ1Q99689 392 aa10.39□□□□□ -0.75
TRPS1-209ENST00000519674 CCDC66A2RUB6 948 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 TSC1Q92574 1164 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 GEMIN8Q9NWZ8 242 aaKnown RBP10.38□□□□□ -0.75
TRPS1-209ENST00000519674 CCDC39Q9UFE4 941 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 ZRANB1Q9UGI0 708 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 CPSF1Q10570 1443 aaKnown RBP10.38□□□□□ -0.75
TRPS1-209ENST00000519674 LRRC7Q96NW7 1537 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 KNDC1Q76NI1 1749 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 CLEC17AQ6ZS10 378 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 SMC5Q8IY18 1101 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 TIGD1Q96MW7 591 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 EMILIN1Q9Y6C2 1016 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 EDC4Q6P2E9 1401 aaKnown RBP10.38□□□□□ -0.75
TRPS1-209ENST00000519674 CLGNO14967 610 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 PDCL2Q8N4E4 241 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 KCNG1Q9UIX4 513 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 CCDC61Q9Y6R9 512 aa10.38□□□□□ -0.75
TRPS1-209ENST00000519674 TECPR2O15040 1411 aa10.37□□□□□ -0.75
TRPS1-209ENST00000519674 EXOSC9Q06265 439 aaKnown RBP10.37□□□□□ -0.75
TRPS1-209ENST00000519674 KIF3AQ9Y496 699 aa10.37□□□□□ -0.75
TRPS1-209ENST00000519674 FAM135BQ49AJ0 1406 aa10.37□□□□□ -0.75
TRPS1-209ENST00000519674 HMOX1P09601 288 aa10.37□□□□□ -0.75
TRPS1-209ENST00000519674 SLFN14P0C7P3 912 aa10.37□□□□□ -0.75
TRPS1-209ENST00000519674 PRKAR2BP31323 418 aa10.37□□□□□ -0.75
TRPS1-209ENST00000519674 HDAC5Q9UQL6 1122 aa10.37□□□□□ -0.75
TRPS1-209ENST00000519674 CPS1P31327 1500 aa10.37□□□□□ -0.75
TRPS1-209ENST00000519674 ROBO2Q9HCK4 1378 aa10.37□□□□□ -0.75
TRPS1-209ENST00000519674 LTKP29376 864 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 ANKRD7Q92527 254 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 BCL2L12Q9HB09 334 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 ADAMTS13Q76LX8 1427 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 KIAA2012Q0VF49 1180 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 HSCBQ8IWL3 235 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 TSPYL1Q9H0U9 437 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 OGFRQ9NZT2 677 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 CDC42BPGQ6DT37 1551 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 PRR36Q9H6K5 1346 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 FCHSD2O94868 740 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 RBSNQ9H1K0 784 aa10.36□□□□□ -0.75
TRPS1-209ENST00000519674 U2AF2P26368 475 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRPS1-209ENST00000519674 RRS1Q15050 365 aaKnown RBP10.35□□□□□ -0.75
TRPS1-209ENST00000519674 SLC26A8Q96RN1 970 aa10.35□□□□□ -0.75
TRPS1-209ENST00000519674 C22orf23Q9BZE7 217 aa10.35□□□□□ -0.75
TRPS1-209ENST00000519674 SMC4Q9NTJ3 1288 aa10.35□□□□□ -0.75
TRPS1-209ENST00000519674 MON2Q7Z3U7 1717 aa10.35□□□□□ -0.75
TRPS1-209ENST00000519674 COG3Q96JB2 828 aa10.35□□□□□ -0.75
TRPS1-209ENST00000519674 ITSN1Q15811 1721 aa10.34□□□□□ -0.75
TRPS1-209ENST00000519674 SNX21Q969T3 373 aa10.34□□□□□ -0.75
TRPS1-209ENST00000519674 ZKSCAN2Q63HK3 967 aa10.34□□□□□ -0.75
TRPS1-209ENST00000519674 AEBP1Q8IUX7 1158 aa10.34□□□□□ -0.75
TRPS1-209ENST00000519674 SIRT1Q96EB6 747 aa10.34□□□□□ -0.75
TRPS1-209ENST00000519674 PHACTR3Q96KR7 559 aa10.34□□□□□ -0.75
TRPS1-209ENST00000519674 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
TRPS1-209ENST00000519674 TRIM6-TRIM34B2RNG4 842 aa10.33□□□□□ -0.76
TRPS1-209ENST00000519674 CT47B1P0C2W7 299 aaPredicted RBP10.33□□□□□ -0.76
TRPS1-209ENST00000519674 SSH1Q8WYL5 1049 aa10.33□□□□□ -0.76
TRPS1-209ENST00000519674 TRIM34Q9BYJ4 488 aa10.33□□□□□ -0.76
TRPS1-209ENST00000519674 AKAP12Q02952 1782 aa10.33□□□□□ -0.76
TRPS1-209ENST00000519674 AXDND1Q5T1B0 1012 aaPredicted RBP10.33□□□□□ -0.76
TRPS1-209ENST00000519674 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
TRPS1-209ENST00000519674 DDX49Q9Y6V7 483 aaKnown RBP10.33□□□□□ -0.76
TRPS1-209ENST00000519674 CDK12Q9NYV4 1490 aaPredicted RBP10.33□□□□□ -0.76
TRPS1-209ENST00000519674 C3P01024 1663 aa10.33□□□□□ -0.76
TRPS1-209ENST00000519674 IL16Q14005 1332 aa10.33□□□□□ -0.76
TRPS1-209ENST00000519674 PLEKHG1Q9ULL1 1385 aa10.32□□□□□ -0.76
TRPS1-209ENST00000519674 MVPQ14764 893 aaKnown RBP10.32□□□□□ -0.76
TRPS1-209ENST00000519674 ZSCAN23Q3MJ62 389 aa10.32□□□□□ -0.76
TRPS1-209ENST00000519674 DZIP1LQ8IYY4 767 aaKnown RBP10.32□□□□□ -0.76
TRPS1-209ENST00000519674 CNPY4Q8N129 248 aa10.32□□□□□ -0.76
TRPS1-209ENST00000519674 THUMPD2Q9BTF0 503 aaKnown RBP10.32□□□□□ -0.76
TRPS1-209ENST00000519674 EFCC1Q9HA90 598 aa10.32□□□□□ -0.76
TRPS1-209ENST00000519674 TRIM27P14373 513 aa10.32□□□□□ -0.76
TRPS1-209ENST00000519674 IL13P35225 146 aa10.32□□□□□ -0.76
TRPS1-209ENST00000519674 CALCOCO1Q9P1Z2 691 aa10.32□□□□□ -0.76
TRPS1-209ENST00000519674 PIBF1Q8WXW3 757 aa10.31□□□□□ -0.76
TRPS1-209ENST00000519674 AATKQ6ZMQ8 1374 aa10.31□□□□□ -0.76
TRPS1-209ENST00000519674 GOLGA6L22H0YM25 854 aa10.31□□□□□ -0.76
TRPS1-209ENST00000519674 PMFBP1Q8TBY8 1022 aa10.31□□□□□ -0.76
TRPS1-209ENST00000519674 ZNF622Q969S3 477 aaKnown RBP eCLIP10.31□□□□□ -0.762e-8■□□□□ 10.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms