RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
CSMD1-205ENST00000519623 NSD3Q9BZ95 1437 aa17.29■□□□□ 0.36
CSMD1-205ENST00000519623 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
CSMD1-205ENST00000519623 SHANK3Q9BYB0 1731 aa17.28■□□□□ 0.36
CSMD1-205ENST00000519623 FLT4P35916 1363 aa17.28■□□□□ 0.36
CSMD1-205ENST00000519623 CGNL1Q0VF96 1302 aa17.27■□□□□ 0.36
CSMD1-205ENST00000519623 EMILIN1Q9Y6C2 1016 aa17.27■□□□□ 0.36
CSMD1-205ENST00000519623 PAPPAQ13219 1627 aa17.27■□□□□ 0.36
CSMD1-205ENST00000519623 ZNF827Q17R98 1081 aa17.26■□□□□ 0.35
CSMD1-205ENST00000519623 SLC27A3Q5K4L6 730 aa17.26■□□□□ 0.35
CSMD1-205ENST00000519623 RAPGEF4Q8WZA2 1011 aa17.26■□□□□ 0.35
CSMD1-205ENST00000519623 SYTL4Q96C24 671 aaPredicted RBP17.26■□□□□ 0.35
CSMD1-205ENST00000519623 SMG6Q86US8 1419 aaKnown RBP17.25■□□□□ 0.35
CSMD1-205ENST00000519623 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
CSMD1-205ENST00000519623 SGIP1Q9BQI5 828 aa17.25■□□□□ 0.35
CSMD1-205ENST00000519623 MTFR1LQ9H019 292 aa17.25■□□□□ 0.35
CSMD1-205ENST00000519623 NSD2O96028 1365 aa17.25■□□□□ 0.35
CSMD1-205ENST00000519623 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
CSMD1-205ENST00000519623 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
CSMD1-205ENST00000519623 KCNQ4P56696 695 aa17.23■□□□□ 0.35
CSMD1-205ENST00000519623 EIF4G2P78344 907 aaKnown RBP eCLIP17.23■□□□□ 0.35
CSMD1-205ENST00000519623 DOT1LQ8TEK3 1739 aa17.23■□□□□ 0.35
CSMD1-205ENST00000519623 MAP2P11137 1827 aaKnown RBP17.22■□□□□ 0.35
CSMD1-205ENST00000519623 CCER1Q8TC90 406 aaPredicted RBP17.22■□□□□ 0.35
CSMD1-205ENST00000519623 POLR3GLQ9BT43 218 aa17.22■□□□□ 0.35
CSMD1-205ENST00000519623 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.35
CSMD1-205ENST00000519623 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.35
CSMD1-205ENST00000519623 POLKQ9UBT6 870 aa17.21■□□□□ 0.35
CSMD1-205ENST00000519623 CYP27B1O15528 508 aa17.2■□□□□ 0.34
CSMD1-205ENST00000519623 LY75O60449 1722 aa17.2■□□□□ 0.34
CSMD1-205ENST00000519623 SYT17Q9BSW7 474 aa17.19■□□□□ 0.34
CSMD1-205ENST00000519623 NCAPD2Q15021 1401 aa17.19■□□□□ 0.34
CSMD1-205ENST00000519623 PCDH11XQ9BZA7 1347 aa17.19■□□□□ 0.34
CSMD1-205ENST00000519623 PCDH11YQ9BZA8 1340 aa17.19■□□□□ 0.34
CSMD1-205ENST00000519623 ANKRD26Q9UPS8 1709 aa17.18■□□□□ 0.34
CSMD1-205ENST00000519623 EYA1Q99502 592 aa17.18■□□□□ 0.34
CSMD1-205ENST00000519623 FHDC1Q9C0D6 1143 aaPredicted RBP17.18■□□□□ 0.34
CSMD1-205ENST00000519623 PANK3Q9H999 370 aa17.18■□□□□ 0.34
CSMD1-205ENST00000519623 PNPLA7Q6ZV29 1317 aa17.18■□□□□ 0.34
CSMD1-205ENST00000519623 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
CSMD1-205ENST00000519623 QSER1Q2KHR3 1735 aa17.17■□□□□ 0.34
CSMD1-205ENST00000519623 SLC16A10Q8TF71 515 aa17.17■□□□□ 0.34
CSMD1-205ENST00000519623 ARXQ96QS3 562 aa17.17■□□□□ 0.34
CSMD1-205ENST00000519623 TFCP2L1Q9NZI6 479 aa17.17■□□□□ 0.34
CSMD1-205ENST00000519623 CCNL1Q9UK58 526 aaPredicted RBP17.17■□□□□ 0.34
CSMD1-205ENST00000519623 NKX1-1Q15270 411 aaPredicted RBP17.16■□□□□ 0.34
CSMD1-205ENST00000519623 YY1P25490 414 aa17.15■□□□□ 0.34
CSMD1-205ENST00000519623 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
CSMD1-205ENST00000519623 PKD1L3Q7Z443 1732 aa17.14■□□□□ 0.33
CSMD1-205ENST00000519623 MPRIPQ6WCQ1 1025 aa17.14■□□□□ 0.33
CSMD1-205ENST00000519623 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.33
CSMD1-205ENST00000519623 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
CSMD1-205ENST00000519623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.13■□□□□ 0.33
CSMD1-205ENST00000519623 SPG7Q9UQ90 795 aa17.13■□□□□ 0.33
CSMD1-205ENST00000519623 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
CSMD1-205ENST00000519623 ITGB4P16144 1822 aa17.12■□□□□ 0.33
CSMD1-205ENST00000519623 PIGBQ92521 554 aa17.12■□□□□ 0.33
CSMD1-205ENST00000519623 TOGARAM1Q9Y4F4 1720 aa17.11■□□□□ 0.33
CSMD1-205ENST00000519623 COL23A1Q86Y22 540 aaPredicted RBP17.11■□□□□ 0.33
CSMD1-205ENST00000519623 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
CSMD1-205ENST00000519623 PALLDQ8WX93 1383 aa17.1■□□□□ 0.33
CSMD1-205ENST00000519623 SMARCC1Q92922 1105 aaPredicted RBP17.09■□□□□ 0.33
CSMD1-205ENST00000519623 PHKG2P15735 406 aa17.08■□□□□ 0.32
CSMD1-205ENST00000519623 POLD1P28340 1107 aa17.08■□□□□ 0.32
CSMD1-205ENST00000519623 IFNL2Q8IZJ0 200 aa17.08■□□□□ 0.32
CSMD1-205ENST00000519623 TAF1LQ8IZX4 1826 aa17.07■□□□□ 0.32
CSMD1-205ENST00000519623 IGSF1Q8N6C5 1336 aa17.07■□□□□ 0.32
CSMD1-205ENST00000519623 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
CSMD1-205ENST00000519623 MORC1Q86VD1 984 aa17.07■□□□□ 0.32
CSMD1-205ENST00000519623 C5P01031 1676 aa17.07■□□□□ 0.32
CSMD1-205ENST00000519623 UTRNP46939 3433 aa17.06■□□□□ 0.32
CSMD1-205ENST00000519623 MSH5O43196 834 aa17.06■□□□□ 0.32
CSMD1-205ENST00000519623 ASAP1Q9ULH1 1129 aa17.05■□□□□ 0.32
CSMD1-205ENST00000519623 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
CSMD1-205ENST00000519623 PLEKHG2Q9H7P9 1386 aa17.04■□□□□ 0.32
CSMD1-205ENST00000519623 AMIGO3Q86WK7 504 aa17.04■□□□□ 0.32
CSMD1-205ENST00000519623 FLAD1Q8NFF5 587 aa17.04■□□□□ 0.32
CSMD1-205ENST00000519623 TMOD3Q9NYL9 352 aa17.04■□□□□ 0.32
CSMD1-205ENST00000519623 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
CSMD1-205ENST00000519623 SIK1P57059 783 aa17.03■□□□□ 0.32
CSMD1-205ENST00000519623 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
CSMD1-205ENST00000519623 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.32
CSMD1-205ENST00000519623 MSL1Q68DK7 614 aa17.02■□□□□ 0.32
CSMD1-205ENST00000519623 KLHL34Q8N239 644 aa17.02■□□□□ 0.32
CSMD1-205ENST00000519623 ATG3Q9NT62 314 aa17.02■□□□□ 0.32
CSMD1-205ENST00000519623 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
CSMD1-205ENST00000519623 PLEKHO1Q53GL0 409 aaPredicted RBP17.01■□□□□ 0.31
CSMD1-205ENST00000519623 SMIM5Q71RC9 77 aa17.01■□□□□ 0.31
CSMD1-205ENST00000519623 LINC00116Q8NCU8 138 aa17.01■□□□□ 0.31
CSMD1-205ENST00000519623 NLGN2Q8NFZ4 835 aa17.01■□□□□ 0.31
CSMD1-205ENST00000519623 CHD4Q14839 1912 aa17■□□□□ 0.31
CSMD1-205ENST00000519623 ERVV-2B6SEH9 535 aa17■□□□□ 0.31
CSMD1-205ENST00000519623 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
CSMD1-205ENST00000519623 ITPK1Q13572 414 aa17■□□□□ 0.31
CSMD1-205ENST00000519623 GPR162Q16538 588 aa17■□□□□ 0.31
CSMD1-205ENST00000519623 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
CSMD1-205ENST00000519623 AK7Q96M32 723 aa17■□□□□ 0.31
CSMD1-205ENST00000519623 UBR3Q6ZT12 1888 aa16.99■□□□□ 0.31
CSMD1-205ENST00000519623 IL13P35225 146 aa16.99■□□□□ 0.31
CSMD1-205ENST00000519623 AMOTQ4VCS5 1084 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms