RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 ACSBG1Q96GR2 724 aa8.62□□□□□ -1.03
IGKV3D-25-201ENST00000519599 NBPF4Q96M43 638 aa8.62□□□□□ -1.03
IGKV3D-25-201ENST00000519599 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
IGKV3D-25-201ENST00000519599 TXNRD1Q16881 649 aa8.61□□□□□ -1.03
IGKV3D-25-201ENST00000519599 LTV1Q96GA3 475 aaPredicted RBP8.61□□□□□ -1.03
IGKV3D-25-201ENST00000519599 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
IGKV3D-25-201ENST00000519599 EMILIN1Q9Y6C2 1016 aa8.61□□□□□ -1.03
IGKV3D-25-201ENST00000519599 UBR3Q6ZT12 1888 aa8.61□□□□□ -1.03
IGKV3D-25-201ENST00000519599 SMG6Q86US8 1419 aaKnown RBP8.61□□□□□ -1.03
IGKV3D-25-201ENST00000519599 FLT4P35916 1363 aa8.61□□□□□ -1.03
IGKV3D-25-201ENST00000519599 HSPA5P11021 654 aaKnown RBP8.6□□□□□ -1.03
IGKV3D-25-201ENST00000519599 USHBP1Q8N6Y0 703 aa8.6□□□□□ -1.03
IGKV3D-25-201ENST00000519599 SGIP1Q9BQI5 828 aa8.6□□□□□ -1.03
IGKV3D-25-201ENST00000519599 PTGER2P43116 358 aa8.59□□□□□ -1.03
IGKV3D-25-201ENST00000519599 AMPHP49418 695 aa8.59□□□□□ -1.03
IGKV3D-25-201ENST00000519599 ZNF827Q17R98 1081 aa8.59□□□□□ -1.03
IGKV3D-25-201ENST00000519599 SLC15A2Q16348 729 aa8.58□□□□□ -1.04
IGKV3D-25-201ENST00000519599 CDCA8Q53HL2 280 aa8.58□□□□□ -1.04
IGKV3D-25-201ENST00000519599 CHD4Q14839 1912 aa8.58□□□□□ -1.04
IGKV3D-25-201ENST00000519599 COL5A3P25940 1745 aaPredicted RBP8.57□□□□□ -1.04
IGKV3D-25-201ENST00000519599 CYP27B1O15528 508 aa8.57□□□□□ -1.04
IGKV3D-25-201ENST00000519599 NBPF14Q5TI25 921 aa8.57□□□□□ -1.04
IGKV3D-25-201ENST00000519599 DDX54Q8TDD1 881 aaKnown RBP8.57□□□□□ -1.04
IGKV3D-25-201ENST00000519599 AKT1S1Q96B36 256 aa8.57□□□□□ -1.04
IGKV3D-25-201ENST00000519599 POLKQ9UBT6 870 aa8.57□□□□□ -1.04
IGKV3D-25-201ENST00000519599 SCN11AQ9UI33 1791 aa8.57□□□□□ -1.04
IGKV3D-25-201ENST00000519599 MYH14Q7Z406 1995 aaKnown RBP8.57□□□□□ -1.04
IGKV3D-25-201ENST00000519599 C4BP0C0L5 1744 aa8.57□□□□□ -1.04
IGKV3D-25-201ENST00000519599 WASHC2AQ641Q2 1341 aa8.56□□□□□ -1.04
IGKV3D-25-201ENST00000519599 ZNF831Q5JPB2 1677 aa8.56□□□□□ -1.04
IGKV3D-25-201ENST00000519599 KCNQ4P56696 695 aa8.56□□□□□ -1.04
IGKV3D-25-201ENST00000519599 ZCRB1Q8TBF4 217 aaKnown RBP8.56□□□□□ -1.04
IGKV3D-25-201ENST00000519599 PRIM1P49642 420 aaKnown RBP8.55□□□□□ -1.04
IGKV3D-25-201ENST00000519599 EIF4G2P78344 907 aaKnown RBP eCLIP8.55□□□□□ -1.04
IGKV3D-25-201ENST00000519599 PANK3Q9H999 370 aa8.55□□□□□ -1.04
IGKV3D-25-201ENST00000519599 ADAMTS7Q9UKP4 1686 aa8.55□□□□□ -1.04
IGKV3D-25-201ENST00000519599 CGNL1Q0VF96 1302 aa8.54□□□□□ -1.04
IGKV3D-25-201ENST00000519599 PNPLA7Q6ZV29 1317 aa8.54□□□□□ -1.04
IGKV3D-25-201ENST00000519599 CICQ96RK0 1608 aaPredicted RBP8.54□□□□□ -1.04
IGKV3D-25-201ENST00000519599 ZBTB7AO95365 584 aa8.54□□□□□ -1.04
IGKV3D-25-201ENST00000519599 CCER1Q8TC90 406 aaPredicted RBP8.54□□□□□ -1.04
IGKV3D-25-201ENST00000519599 EYA1Q99502 592 aa8.54□□□□□ -1.04
IGKV3D-25-201ENST00000519599 SPON1Q9HCB6 807 aa8.54□□□□□ -1.04
IGKV3D-25-201ENST00000519599 KIAA1551Q9HCM1 1747 aa8.54□□□□□ -1.04
IGKV3D-25-201ENST00000519599 KIF7Q2M1P5 1343 aa8.54□□□□□ -1.04
IGKV3D-25-201ENST00000519599 EIF4A2Q14240 407 aaKnown RBP8.53□□□□□ -1.04
IGKV3D-25-201ENST00000519599 NKX1-1Q15270 411 aaPredicted RBP8.53□□□□□ -1.04
IGKV3D-25-201ENST00000519599 AMER1Q5JTC6 1135 aaPredicted RBP8.53□□□□□ -1.04
IGKV3D-25-201ENST00000519599 AMIGO3Q86WK7 504 aa8.53□□□□□ -1.04
IGKV3D-25-201ENST00000519599 C4AP0C0L4 1744 aa8.53□□□□□ -1.04
IGKV3D-25-201ENST00000519599 TJP1Q07157 1748 aa8.53□□□□□ -1.04
IGKV3D-25-201ENST00000519599 UTRNP46939 3433 aa8.53□□□□□ -1.04
IGKV3D-25-201ENST00000519599 IGSF1Q8N6C5 1336 aa8.53□□□□□ -1.04
IGKV3D-25-201ENST00000519599 PER1O15534 1290 aaPredicted RBP8.52□□□□□ -1.05
IGKV3D-25-201ENST00000519599 TATP17735 454 aaPredicted RBP8.52□□□□□ -1.05
IGKV3D-25-201ENST00000519599 SLC27A3Q5K4L6 730 aa8.52□□□□□ -1.05
IGKV3D-25-201ENST00000519599 STK32BQ9NY57 414 aa8.52□□□□□ -1.05
IGKV3D-25-201ENST00000519599 ATF5Q9Y2D1 282 aaPredicted RBP8.52□□□□□ -1.05
IGKV3D-25-201ENST00000519599 SIPA1L3O60292 1781 aaPredicted RBP8.52□□□□□ -1.05
IGKV3D-25-201ENST00000519599 KDM6AO15550 1401 aaPredicted RBP8.52□□□□□ -1.05
IGKV3D-25-201ENST00000519599 KIF13BQ9NQT8 1826 aa8.52□□□□□ -1.05
IGKV3D-25-201ENST00000519599 PCDH11XQ9BZA7 1347 aa8.52□□□□□ -1.05
IGKV3D-25-201ENST00000519599 PCDH11YQ9BZA8 1340 aa8.52□□□□□ -1.05
IGKV3D-25-201ENST00000519599 COL3A1P02461 1466 aaPredicted RBP8.51□□□□□ -1.05
IGKV3D-25-201ENST00000519599 PLEKHG2Q9H7P9 1386 aa8.51□□□□□ -1.05
IGKV3D-25-201ENST00000519599 RAPGEF4Q8WZA2 1011 aa8.51□□□□□ -1.05
IGKV3D-25-201ENST00000519599 MTFR1LQ9H019 292 aa8.51□□□□□ -1.05
IGKV3D-25-201ENST00000519599 UBR2Q8IWV8 1755 aa8.5□□□□□ -1.05
IGKV3D-25-201ENST00000519599 KDRP35968 1356 aa8.5□□□□□ -1.05
IGKV3D-25-201ENST00000519599 MAP3K5Q99683 1374 aa8.5□□□□□ -1.05
IGKV3D-25-201ENST00000519599 BRCA1P38398 1863 aaKnown RBP8.5□□□□□ -1.05
IGKV3D-25-201ENST00000519599 POLR3GLQ9BT43 218 aa8.5□□□□□ -1.05
IGKV3D-25-201ENST00000519599 PALLDQ8WX93 1383 aa8.49□□□□□ -1.05
IGKV3D-25-201ENST00000519599 PPM1GO15355 546 aaPredicted RBP8.49□□□□□ -1.05
IGKV3D-25-201ENST00000519599 PHKG2P15735 406 aa8.49□□□□□ -1.05
IGKV3D-25-201ENST00000519599 TNNT2P45379 298 aaPredicted RBP8.49□□□□□ -1.05
IGKV3D-25-201ENST00000519599 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
IGKV3D-25-201ENST00000519599 PIGBQ92521 554 aa8.49□□□□□ -1.05
IGKV3D-25-201ENST00000519599 SYTL4Q96C24 671 aaPredicted RBP8.49□□□□□ -1.05
IGKV3D-25-201ENST00000519599 SYT17Q9BSW7 474 aa8.49□□□□□ -1.05
IGKV3D-25-201ENST00000519599 FHDC1Q9C0D6 1143 aaPredicted RBP8.49□□□□□ -1.05
IGKV3D-25-201ENST00000519599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.49□□□□□ -1.05
IGKV3D-25-201ENST00000519599 IL13P35225 146 aa8.48□□□□□ -1.05
IGKV3D-25-201ENST00000519599 SMIM5Q71RC9 77 aa8.48□□□□□ -1.05
IGKV3D-25-201ENST00000519599 COL23A1Q86Y22 540 aaPredicted RBP8.48□□□□□ -1.05
IGKV3D-25-201ENST00000519599 SLC4A9Q96Q91 983 aa8.48□□□□□ -1.05
IGKV3D-25-201ENST00000519599 CCNL1Q9UK58 526 aaPredicted RBP8.48□□□□□ -1.05
IGKV3D-25-201ENST00000519599 MRC1P22897 1456 aa8.48□□□□□ -1.05
IGKV3D-25-201ENST00000519599 ITPK1Q13572 414 aa8.47□□□□□ -1.05
IGKV3D-25-201ENST00000519599 MPRIPQ6WCQ1 1025 aa8.47□□□□□ -1.05
IGKV3D-25-201ENST00000519599 N4BP2Q86UW6 1770 aaPredicted RBP8.46□□□□□ -1.05
IGKV3D-25-201ENST00000519599 LINC00116Q8NCU8 138 aa8.46□□□□□ -1.06
IGKV3D-25-201ENST00000519599 SLC16A10Q8TF71 515 aa8.46□□□□□ -1.06
IGKV3D-25-201ENST00000519599 ATG3Q9NT62 314 aa8.46□□□□□ -1.06
IGKV3D-25-201ENST00000519599 ASAP1Q9ULH1 1129 aa8.46□□□□□ -1.06
IGKV3D-25-201ENST00000519599 DLG5Q8TDM6 1919 aa8.46□□□□□ -1.06
IGKV3D-25-201ENST00000519599 NPC1L1Q9UHC9 1359 aa8.46□□□□□ -1.06
IGKV3D-25-201ENST00000519599 IFNL2Q8IZJ0 200 aa8.45□□□□□ -1.06
IGKV3D-25-201ENST00000519599 ARXQ96QS3 562 aa8.45□□□□□ -1.06
IGKV3D-25-201ENST00000519599 PPP1R1BQ9UD71 204 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms