RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 LAS1LQ9Y4W2 734 aaKnown RBP12.92□□□□□ -0.34
PDGFRB-205ENST00000519575 TWISTNBQ3B726 338 aaPredicted RBP12.91□□□□□ -0.34
PDGFRB-205ENST00000519575 CPDO75976 1380 aa12.91□□□□□ -0.34
PDGFRB-205ENST00000519575 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
PDGFRB-205ENST00000519575 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.34
PDGFRB-205ENST00000519575 CHL1O00533 1208 aa12.9□□□□□ -0.34
PDGFRB-205ENST00000519575 MVPQ14764 893 aaKnown RBP12.9□□□□□ -0.34
PDGFRB-205ENST00000519575 PLEKHO1Q53GL0 409 aaPredicted RBP12.9□□□□□ -0.34
PDGFRB-205ENST00000519575 C20orf194Q5TEA3 1177 aa12.9□□□□□ -0.34
PDGFRB-205ENST00000519575 SSH1Q8WYL5 1049 aa12.9□□□□□ -0.34
PDGFRB-205ENST00000519575 API5Q9BZZ5 524 aaKnown RBP12.9□□□□□ -0.34
PDGFRB-205ENST00000519575 TSHZ2Q9NRE2 1034 aa12.9□□□□□ -0.34
PDGFRB-205ENST00000519575 CRB1P82279 1406 aa12.89□□□□□ -0.35
PDGFRB-205ENST00000519575 MTHFSDQ2M296 383 aaKnown RBP12.89□□□□□ -0.35
PDGFRB-205ENST00000519575 KDM2BQ8NHM5 1336 aa12.88□□□□□ -0.35
PDGFRB-205ENST00000519575 SLAIN2Q9P270 581 aa12.88□□□□□ -0.35
PDGFRB-205ENST00000519575 VAMP4O75379 141 aa12.87□□□□□ -0.35
PDGFRB-205ENST00000519575 BRINP3Q76B58 766 aa12.87□□□□□ -0.35
PDGFRB-205ENST00000519575 ANKRD24Q8TF21 1146 aa12.87□□□□□ -0.35
PDGFRB-205ENST00000519575 RWDD1Q9H446 243 aaPredicted RBP12.87□□□□□ -0.35
PDGFRB-205ENST00000519575 PTPRCP08575 1304 aa12.87□□□□□ -0.35
PDGFRB-205ENST00000519575 ERBB3P21860 1342 aa12.87□□□□□ -0.35
PDGFRB-205ENST00000519575 ZNF335Q9H4Z2 1342 aaPredicted RBP12.87□□□□□ -0.35
PDGFRB-205ENST00000519575 RGPD2P0DJD1 1756 aa12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 COL18A1P39060 1754 aa12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 TRIM27P14373 513 aa12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 XPCQ01831 940 aaPredicted RBP12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 AKAP4Q5JQC9 854 aa12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 C1orf141Q5JVX7 400 aa12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 LTV1Q96GA3 475 aaPredicted RBP12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 BCL2L13Q9BXK5 485 aa12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 TSPYL4Q9UJ04 414 aa12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 RGPD5Q99666 1765 aa12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 SOS2Q07890 1332 aaPredicted RBP12.86□□□□□ -0.35
PDGFRB-205ENST00000519575 VIRMAQ69YN4 1812 aaKnown RBP12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 FAM83GA6ND36 823 aa12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 HOXB7P09629 217 aa12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 MCM10Q7L590 875 aa12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 PANK1Q8TE04 598 aa12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 THUMPD2Q9BTF0 503 aaKnown RBP12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 NOB1Q9ULX3 412 aaKnown RBP12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
PDGFRB-205ENST00000519575 ZBTB7CA1YPR0 619 aa12.84□□□□□ -0.35
PDGFRB-205ENST00000519575 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
PDGFRB-205ENST00000519575 ITPRIPQ8IWB1 547 aa12.84□□□□□ -0.35
PDGFRB-205ENST00000519575 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
PDGFRB-205ENST00000519575 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
PDGFRB-205ENST00000519575 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
PDGFRB-205ENST00000519575 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
PDGFRB-205ENST00000519575 ADAMTS7Q9UKP4 1686 aa12.83□□□□□ -0.35
PDGFRB-205ENST00000519575 NBPF6Q5VWK0 638 aa12.83□□□□□ -0.36
PDGFRB-205ENST00000519575 NBPF4Q96M43 638 aa12.83□□□□□ -0.36
PDGFRB-205ENST00000519575 ABCC4O15439 1325 aa12.83□□□□□ -0.36
PDGFRB-205ENST00000519575 PKD1L3Q7Z443 1732 aa12.82□□□□□ -0.36
PDGFRB-205ENST00000519575 N4BP2Q86UW6 1770 aaPredicted RBP12.82□□□□□ -0.36
PDGFRB-205ENST00000519575 ZNF530Q6P9A1 599 aaPredicted RBP12.82□□□□□ -0.36
PDGFRB-205ENST00000519575 SPG7Q9UQ90 795 aa12.82□□□□□ -0.36
PDGFRB-205ENST00000519575 AHDC1Q5TGY3 1603 aaPredicted RBP12.81□□□□□ -0.36
PDGFRB-205ENST00000519575 HSP90AB1P08238 724 aaKnown RBP12.81□□□□□ -0.36
PDGFRB-205ENST00000519575 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
PDGFRB-205ENST00000519575 TEFQ10587 303 aa12.81□□□□□ -0.36
PDGFRB-205ENST00000519575 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
PDGFRB-205ENST00000519575 CCDC30Q5VVM6 783 aa12.81□□□□□ -0.36
PDGFRB-205ENST00000519575 SCN11AQ9UI33 1791 aa12.8□□□□□ -0.36
PDGFRB-205ENST00000519575 RLBP1P12271 317 aa12.8□□□□□ -0.36
PDGFRB-205ENST00000519575 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
PDGFRB-205ENST00000519575 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
PDGFRB-205ENST00000519575 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
PDGFRB-205ENST00000519575 SIPA1L3O60292 1781 aaPredicted RBP12.79□□□□□ -0.36
PDGFRB-205ENST00000519575 CSB-PGBD3P0DP91 1061 aa12.79□□□□□ -0.36
PDGFRB-205ENST00000519575 ZC3H6P61129 1189 aaKnown RBP12.79□□□□□ -0.36
PDGFRB-205ENST00000519575 TSPYL6Q8N831 410 aa12.79□□□□□ -0.36
PDGFRB-205ENST00000519575 RBM19Q9Y4C8 960 aaKnown RBP12.79□□□□□ -0.36
PDGFRB-205ENST00000519575 COL22A1Q8NFW1 1626 aaPredicted RBP12.79□□□□□ -0.36
PDGFRB-205ENST00000519575 TMEM57Q8N5G2 664 aa12.78□□□□□ -0.36
PDGFRB-205ENST00000519575 USHBP1Q8N6Y0 703 aa12.78□□□□□ -0.36
PDGFRB-205ENST00000519575 PRDM11Q9NQV5 511 aa12.78□□□□□ -0.36
PDGFRB-205ENST00000519575 NLRP2Q9NX02 1062 aa12.78□□□□□ -0.36
PDGFRB-205ENST00000519575 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.37
PDGFRB-205ENST00000519575 IL17REQ8NFR9 667 aa12.77□□□□□ -0.37
PDGFRB-205ENST00000519575 LRRC59Q96AG4 307 aaKnown RBP12.77□□□□□ -0.37
PDGFRB-205ENST00000519575 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
PDGFRB-205ENST00000519575 WDR17Q8IZU2 1322 aa12.77□□□□□ -0.37
PDGFRB-205ENST00000519575 ROBO1Q9Y6N7 1651 aa12.77□□□□□ -0.37
PDGFRB-205ENST00000519575 COL14A1Q05707 1796 aaKnown RBP12.76□□□□□ -0.37
PDGFRB-205ENST00000519575 ELL2O00472 640 aaPredicted RBP12.76□□□□□ -0.37
PDGFRB-205ENST00000519575 INTS3Q68E01 1043 aaKnown RBP12.76□□□□□ -0.37
PDGFRB-205ENST00000519575 MRC1P22897 1456 aa12.76□□□□□ -0.37
PDGFRB-205ENST00000519575 COL5A2P05997 1499 aaPredicted RBP12.75□□□□□ -0.37
PDGFRB-205ENST00000519575 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
PDGFRB-205ENST00000519575 GCC1Q96CN9 775 aa12.75□□□□□ -0.37
PDGFRB-205ENST00000519575 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
PDGFRB-205ENST00000519575 LTBP4Q8N2S1 1624 aa12.74□□□□□ -0.37
PDGFRB-205ENST00000519575 RNMTO43148 476 aaKnown RBP12.74□□□□□ -0.37
PDGFRB-205ENST00000519575 PCDH11XQ9BZA7 1347 aa12.73□□□□□ -0.37
PDGFRB-205ENST00000519575 PCDH11YQ9BZA8 1340 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms