RNA–Protein interactions for RNA: ENST00000519305.6

NPIPB3-204, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 848 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-204ENST00000519305 C8orf37Q96NL8 207 aa13.14□□□□□ -0.31
NPIPB3-204ENST00000519305 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
NPIPB3-204ENST00000519305 CRB1P82279 1406 aa13.13□□□□□ -0.31
NPIPB3-204ENST00000519305 PLEKHG2Q9H7P9 1386 aa13.13□□□□□ -0.31
NPIPB3-204ENST00000519305 FBXO41Q8TF61 875 aa13.13□□□□□ -0.31
NPIPB3-204ENST00000519305 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
NPIPB3-204ENST00000519305 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
NPIPB3-204ENST00000519305 SPG7Q9UQ90 795 aa13.13□□□□□ -0.31
NPIPB3-204ENST00000519305 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
NPIPB3-204ENST00000519305 HTATSF1O43719 755 aaKnown RBP13.12□□□□□ -0.31
NPIPB3-204ENST00000519305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.31
NPIPB3-204ENST00000519305 GNAT3A8MTJ3 354 aa13.11□□□□□ -0.31
NPIPB3-204ENST00000519305 E9PSI1 815 aa13.11□□□□□ -0.31
NPIPB3-204ENST00000519305 IL2RBP14784 551 aa13.11□□□□□ -0.31
NPIPB3-204ENST00000519305 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
NPIPB3-204ENST00000519305 ZNF530Q6P9A1 599 aaPredicted RBP13.11□□□□□ -0.31
NPIPB3-204ENST00000519305 UNC5CLQ8IV45 518 aa13.11□□□□□ -0.31
NPIPB3-204ENST00000519305 USP35Q9P2H5 1018 aa13.11□□□□□ -0.31
NPIPB3-204ENST00000519305 IL16Q14005 1332 aa13.11□□□□□ -0.31
NPIPB3-204ENST00000519305 SLIT2O94813 1529 aa13.1□□□□□ -0.31
NPIPB3-204ENST00000519305 SLFN5Q08AF3 891 aa13.1□□□□□ -0.31
NPIPB3-204ENST00000519305 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
NPIPB3-204ENST00000519305 CDCA7LQ96GN5 454 aa13.1□□□□□ -0.31
NPIPB3-204ENST00000519305 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
NPIPB3-204ENST00000519305 CCDC9Q9Y3X0 531 aaKnown RBP13.1□□□□□ -0.31
NPIPB3-204ENST00000519305 MAP3K5Q99683 1374 aa13.09□□□□□ -0.31
NPIPB3-204ENST00000519305 PLCH1Q4KWH8 1693 aa13.09□□□□□ -0.31
NPIPB3-204ENST00000519305 AKAP4Q5JQC9 854 aa13.09□□□□□ -0.31
NPIPB3-204ENST00000519305 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
NPIPB3-204ENST00000519305 LRP6O75581 1613 aa13.09□□□□□ -0.31
NPIPB3-204ENST00000519305 NWD2Q9ULI1 1742 aa13.08□□□□□ -0.32
NPIPB3-204ENST00000519305 CDCA7Q9BWT1 371 aaPredicted RBP13.08□□□□□ -0.32
NPIPB3-204ENST00000519305 USP21Q9UK80 565 aa13.08□□□□□ -0.32
NPIPB3-204ENST00000519305 VPS72Q15906 364 aa13.07□□□□□ -0.32
NPIPB3-204ENST00000519305 MCM10Q7L590 875 aa13.07□□□□□ -0.32
NPIPB3-204ENST00000519305 IFNL2Q8IZJ0 200 aa13.07□□□□□ -0.32
NPIPB3-204ENST00000519305 ZCRB1Q8TBF4 217 aaKnown RBP13.07□□□□□ -0.32
NPIPB3-204ENST00000519305 MEGF6O75095 1541 aa13.07□□□□□ -0.32
NPIPB3-204ENST00000519305 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
NPIPB3-204ENST00000519305 OVOS2A0A0G2JMS6 1433 aa13.06□□□□□ -0.32
NPIPB3-204ENST00000519305 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
NPIPB3-204ENST00000519305 GNAI1P63096 354 aa13.06□□□□□ -0.32
NPIPB3-204ENST00000519305 DCTN1Q14203 1278 aa13.06□□□□□ -0.32
NPIPB3-204ENST00000519305 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
NPIPB3-204ENST00000519305 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
NPIPB3-204ENST00000519305 THUMPD2Q9BTF0 503 aaKnown RBP13.06□□□□□ -0.32
NPIPB3-204ENST00000519305 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
NPIPB3-204ENST00000519305 SPATA31A5Q5VU36 1347 aa13.06□□□□□ -0.32
NPIPB3-204ENST00000519305 SPATA31A7Q8IWB4 1347 aa13.06□□□□□ -0.32
NPIPB3-204ENST00000519305 NRAPQ86VF7 1730 aa13.05□□□□□ -0.32
NPIPB3-204ENST00000519305 PHKG2P15735 406 aa13.05□□□□□ -0.32
NPIPB3-204ENST00000519305 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
NPIPB3-204ENST00000519305 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
NPIPB3-204ENST00000519305 AFF2P51816 1311 aa13.05□□□□□ -0.32
NPIPB3-204ENST00000519305 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
NPIPB3-204ENST00000519305 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
NPIPB3-204ENST00000519305 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
NPIPB3-204ENST00000519305 DLG5Q8TDM6 1919 aa13.04□□□□□ -0.32
NPIPB3-204ENST00000519305 EXOC5O00471 708 aa13.04□□□□□ -0.32
NPIPB3-204ENST00000519305 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
NPIPB3-204ENST00000519305 IL17REQ8NFR9 667 aa13.04□□□□□ -0.32
NPIPB3-204ENST00000519305 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
NPIPB3-204ENST00000519305 PARP4Q9UKK3 1724 aaKnown RBP13.04□□□□□ -0.32
NPIPB3-204ENST00000519305 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
NPIPB3-204ENST00000519305 TEFQ10587 303 aa13.03□□□□□ -0.32
NPIPB3-204ENST00000519305 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
NPIPB3-204ENST00000519305 TRPC5Q9UL62 973 aaPredicted RBP13.03□□□□□ -0.32
NPIPB3-204ENST00000519305 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
NPIPB3-204ENST00000519305 CYP27B1O15528 508 aa13.02□□□□□ -0.33
NPIPB3-204ENST00000519305 ZNF853P0CG23 659 aa13.02□□□□□ -0.33
NPIPB3-204ENST00000519305 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.33
NPIPB3-204ENST00000519305 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.33
NPIPB3-204ENST00000519305 DCAF5Q96JK2 942 aa13.02□□□□□ -0.33
NPIPB3-204ENST00000519305 LGR6Q9HBX8 967 aa13.02□□□□□ -0.33
NPIPB3-204ENST00000519305 BABAM1Q9NWV8 329 aa13.02□□□□□ -0.33
NPIPB3-204ENST00000519305 DISP2A7MBM2 1401 aa13.02□□□□□ -0.33
NPIPB3-204ENST00000519305 CHL1O00533 1208 aa13.01□□□□□ -0.33
NPIPB3-204ENST00000519305 DDB1Q16531 1140 aa13.01□□□□□ -0.33
NPIPB3-204ENST00000519305 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
NPIPB3-204ENST00000519305 FANCIQ9NVI1 1328 aa13.01□□□□□ -0.33
NPIPB3-204ENST00000519305 PKD1L3Q7Z443 1732 aa13.01□□□□□ -0.33
NPIPB3-204ENST00000519305 TNKS1BP1Q9C0C2 1729 aaKnown RBP13□□□□□ -0.33
NPIPB3-204ENST00000519305 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
NPIPB3-204ENST00000519305 GJD4Q96KN9 370 aaPredicted RBP13□□□□□ -0.33
NPIPB3-204ENST00000519305 MBIPQ9NS73 344 aa13□□□□□ -0.33
NPIPB3-204ENST00000519305 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
NPIPB3-204ENST00000519305 A0A0G2JS52 829 aa12.99□□□□□ -0.33
NPIPB3-204ENST00000519305 CT47B1P0C2W7 299 aaPredicted RBP12.99□□□□□ -0.33
NPIPB3-204ENST00000519305 MYT1Q01538 1121 aa12.99□□□□□ -0.33
NPIPB3-204ENST00000519305 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
NPIPB3-204ENST00000519305 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
NPIPB3-204ENST00000519305 ZNF772Q68DY9 489 aaPredicted RBP12.99□□□□□ -0.33
NPIPB3-204ENST00000519305 QTRT2Q9H974 415 aaKnown RBP12.99□□□□□ -0.33
NPIPB3-204ENST00000519305 RCAN3Q9UKA8 241 aa12.99□□□□□ -0.33
NPIPB3-204ENST00000519305 ATRNO75882 1429 aa12.98□□□□□ -0.33
NPIPB3-204ENST00000519305 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
NPIPB3-204ENST00000519305 TNS2Q63HR2 1409 aa12.97□□□□□ -0.33
NPIPB3-204ENST00000519305 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
NPIPB3-204ENST00000519305 ERVV-2B6SEH9 535 aa12.97□□□□□ -0.33
NPIPB3-204ENST00000519305 CABP4P57796 275 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms