RNA–Protein interactions for RNA: ENST00000518960.5

MSR1-209, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 353 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-209ENST00000518960 SH3RF1Q7Z6J0 888 aa4.29□□□□□ -1.72
MSR1-209ENST00000518960 DZIP3Q86Y13 1208 aaKnown RBP4.29□□□□□ -1.72
MSR1-209ENST00000518960 PPARGC1BQ86YN6 1023 aaKnown RBP4.29□□□□□ -1.72
MSR1-209ENST00000518960 HPS1Q92902 700 aa4.29□□□□□ -1.72
MSR1-209ENST00000518960 SENP2Q9HC62 589 aa4.29□□□□□ -1.72
MSR1-209ENST00000518960 ABCC2Q92887 1545 aa4.29□□□□□ -1.72
MSR1-209ENST00000518960 NUP153P49790 1475 aaKnown RBP4.29□□□□□ -1.72
MSR1-209ENST00000518960 FYCO1Q9BQS8 1478 aa4.29□□□□□ -1.72
MSR1-209ENST00000518960 LRRIQ1Q96JM4 1722 aa4.29□□□□□ -1.72
MSR1-209ENST00000518960 CASKIN1Q8WXD9 1431 aa4.29□□□□□ -1.72
MSR1-209ENST00000518960 POTECB2RU33 542 aa4.28□□□□□ -1.72
MSR1-209ENST00000518960 ADH1CP00326 375 aa4.28□□□□□ -1.72
MSR1-209ENST00000518960 GRM5P41594 1212 aa4.28□□□□□ -1.72
MSR1-209ENST00000518960 DHX9Q08211 1270 aaKnown RBP4.28□□□□□ -1.72
MSR1-209ENST00000518960 CCDC125Q86Z20 511 aa4.28□□□□□ -1.72
MSR1-209ENST00000518960 TRMT44Q8IYL2 757 aaKnown RBP4.28□□□□□ -1.72
MSR1-209ENST00000518960 SLC10A4Q96EP9 437 aa4.28□□□□□ -1.72
MSR1-209ENST00000518960 CARD14Q9BXL6 1004 aa4.28□□□□□ -1.72
MSR1-209ENST00000518960 MAP4K5Q9Y4K4 846 aa4.28□□□□□ -1.72
MSR1-209ENST00000518960 CFAP43Q8NDM7 1665 aa4.28□□□□□ -1.72
MSR1-209ENST00000518960 ZCCHC11Q5TAX3 1644 aaKnown RBP4.28□□□□□ -1.72
MSR1-209ENST00000518960 EPRSP07814 1512 aaKnown RBP4.27□□□□□ -1.73
MSR1-209ENST00000518960 ZBBXA8MT70 800 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 UPP2O95045 317 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 WDR4P57081 412 aaKnown RBP4.27□□□□□ -1.73
MSR1-209ENST00000518960 NNTQ13423 1086 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 SCARF1Q14162 830 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 ERFEQ4G0M1 354 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 C4orf48Q5BLP8 95 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 WWC1Q8IX03 1113 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 ADAM32Q8TC27 787 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 EPS8L1Q8TE68 723 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 HMX1Q9NP08 348 aaPredicted RBP4.27□□□□□ -1.73
MSR1-209ENST00000518960 SNRKQ9NRH2 765 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 PGPEP1Q9NXJ5 209 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 EMILIN1Q9Y6C2 1016 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 NDUFB9Q9Y6M9 179 aa4.27□□□□□ -1.73
MSR1-209ENST00000518960 UHRF1BP1LA0JNW5 1464 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 ATP10BO94823 1461 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 CCDC18Q5T9S5 1454 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 C11orf95C9JLR9 678 aaPredicted RBP4.26□□□□□ -1.73
MSR1-209ENST00000518960 ST8SIA5O15466 376 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 FLIIQ13045 1269 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 NBPF20Q3BBV1 942 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 RNF20Q5VTR2 975 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 KIFC2Q96AC6 838 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 KCTD15Q96SI1 283 aaPredicted RBP4.26□□□□□ -1.73
MSR1-209ENST00000518960 C1QTNF2Q9BXJ5 285 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 TRIM34Q9BYJ4 488 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 ESF1Q9H501 851 aaKnown RBP4.26□□□□□ -1.73
MSR1-209ENST00000518960 TLL2Q9Y6L7 1015 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 TIAM1Q13009 1591 aa4.26□□□□□ -1.73
MSR1-209ENST00000518960 NR1H3Q13133 447 aa4.25□□□□□ -1.73
MSR1-209ENST00000518960 SEPT12Q8IYM1 358 aa4.25□□□□□ -1.73
MSR1-209ENST00000518960 CCDC116Q8IYX3 515 aa4.25□□□□□ -1.73
MSR1-209ENST00000518960 ATP13A2Q9NQ11 1180 aa4.25□□□□□ -1.73
MSR1-209ENST00000518960 MAGI3Q5TCQ9 1506 aa4.25□□□□□ -1.73
MSR1-209ENST00000518960 EHBP1L1Q8N3D4 1523 aa4.25□□□□□ -1.73
MSR1-209ENST00000518960 KDM5BQ9UGL1 1544 aa4.25□□□□□ -1.73
MSR1-209ENST00000518960 MTUS2Q5JR59 1369 aa4.25□□□□□ -1.73
MSR1-209ENST00000518960 KIF14Q15058 1648 aa4.24□□□□□ -1.73
MSR1-209ENST00000518960 ASXL2Q76L83 1435 aa4.24□□□□□ -1.73
MSR1-209ENST00000518960 RAD21O60216 631 aa4.24□□□□□ -1.73
MSR1-209ENST00000518960 ZIC2O95409 532 aaPredicted RBP4.24□□□□□ -1.73
MSR1-209ENST00000518960 EIF4G2P78344 907 aaKnown RBP eCLIP4.24□□□□□ -1.73
MSR1-209ENST00000518960 WASHC4Q2M389 1173 aa4.24□□□□□ -1.73
MSR1-209ENST00000518960 KANK4Q5T7N3 995 aaPredicted RBP4.24□□□□□ -1.73
MSR1-209ENST00000518960 MTMR14Q8NCE2 650 aa4.24□□□□□ -1.73
MSR1-209ENST00000518960 GJD4Q96KN9 370 aaPredicted RBP4.24□□□□□ -1.73
MSR1-209ENST00000518960 PCDHB9Q9Y5E1 797 aa4.24□□□□□ -1.73
MSR1-209ENST00000518960 LRRC9Q6ZRR7 1453 aa4.24□□□□□ -1.73
MSR1-209ENST00000518960 WDR7Q9Y4E6 1490 aa4.24□□□□□ -1.73
MSR1-209ENST00000518960 TROQ12816 1431 aaPredicted RBP4.23□□□□□ -1.73
MSR1-209ENST00000518960 PLEKHD1A6NEE1 506 aa4.23□□□□□ -1.73
MSR1-209ENST00000518960 FSHRP23945 695 aa4.23□□□□□ -1.73
MSR1-209ENST00000518960 PPP1R26Q5T8A7 1209 aaPredicted RBP4.23□□□□□ -1.73
MSR1-209ENST00000518960 TSEN34Q9BSV6 310 aaKnown RBP4.23□□□□□ -1.73
MSR1-209ENST00000518960 GMPR2Q9P2T1 348 aaKnown RBP4.23□□□□□ -1.73
MSR1-209ENST00000518960 DACH1Q9UI36 760 aa4.23□□□□□ -1.73
MSR1-209ENST00000518960 TTC37Q6PGP7 1564 aa4.23□□□□□ -1.73
MSR1-209ENST00000518960 MAPKBP1O60336 1514 aa4.22□□□□□ -1.73
MSR1-209ENST00000518960 SUPT6HQ7KZ85 1726 aaKnown RBP4.22□□□□□ -1.73
MSR1-209ENST00000518960 FBXO45P0C2W1 286 aa4.22□□□□□ -1.73
MSR1-209ENST00000518960 TIMP2P16035 220 aa4.22□□□□□ -1.73
MSR1-209ENST00000518960 MRPL14Q6P1L8 145 aaKnown RBP4.22□□□□□ -1.73
MSR1-209ENST00000518960 ITPKCQ96DU7 683 aa4.22□□□□□ -1.73
MSR1-209ENST00000518960 KLF16Q9BXK1 252 aaPredicted RBP4.22□□□□□ -1.73
MSR1-209ENST00000518960 CDK11AQ9UQ88 783 aaPredicted RBP4.22□□□□□ -1.73
MSR1-209ENST00000518960 NCOA2Q15596 1464 aa4.22□□□□□ -1.73
MSR1-209ENST00000518960 MAP3K1Q13233 1512 aa4.21□□□□□ -1.73
MSR1-209ENST00000518960 BMP2P12643 396 aa4.21□□□□□ -1.74
MSR1-209ENST00000518960 FAM69CQ0P6D2 419 aa4.21□□□□□ -1.74
MSR1-209ENST00000518960 TRIM47Q96LD4 638 aa4.21□□□□□ -1.74
MSR1-209ENST00000518960 OCSTAMPQ9BR26 566 aa4.21□□□□□ -1.74
MSR1-209ENST00000518960 DIP2BQ9P265 1576 aa4.21□□□□□ -1.74
MSR1-209ENST00000518960 TSPOAP1O95153 1857 aa4.21□□□□□ -1.74
MSR1-209ENST00000518960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.21□□□□□ -1.74
MSR1-209ENST00000518960 ABCC10Q5T3U5 1492 aa4.2□□□□□ -1.74
MSR1-209ENST00000518960 PHLDB1Q86UU1 1377 aa4.2□□□□□ -1.74
MSR1-209ENST00000518960 CCNB3Q8WWL7 1395 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms